RNA–Protein interactions for RNA: ENST00000557403.5

RBM23-229, Transcript of RNA binding motif protein 23, human

TSL 3

Gene RBM23, Length 826 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM23-229	ENST00000557403	GCC2	Q8IWJ2	1684 aa		13.95	□□□□□ -0.18
RBM23-229	ENST00000557403	SYNM	O15061	1565 aa		13.95	□□□□□ -0.18
RBM23-229	ENST00000557403	ANKLE2	Q86XL3	938 aa		13.94	□□□□□ -0.18
RBM23-229	ENST00000557403	IQGAP1	P46940	1657 aa		13.94	□□□□□ -0.18
RBM23-229	ENST00000557403	NPHP4	O75161	1426 aa	Predicted RBP	13.92	□□□□□ -0.18
RBM23-229	ENST00000557403	IQGAP3	Q86VI3	1631 aa		13.92	□□□□□ -0.18
RBM23-229	ENST00000557403	NOS1	P29475	1434 aa		13.91	□□□□□ -0.18
RBM23-229	ENST00000557403	MED14	O60244	1454 aa		13.91	□□□□□ -0.18
RBM23-229	ENST00000557403	RPRD2	Q5VT52	1461 aa	Known RBP	13.91	□□□□□ -0.18
RBM23-229	ENST00000557403		E9PCH4	1651 aa		13.91	□□□□□ -0.18
RBM23-229	ENST00000557403	STAG3	Q9UJ98	1225 aa		13.9	□□□□□ -0.18
RBM23-229	ENST00000557403	KDM5A	P29375	1690 aa	Known RBP	13.9	□□□□□ -0.18
RBM23-229	ENST00000557403	ADGRB3	O60242	1522 aa		13.9	□□□□□ -0.19
RBM23-229	ENST00000557403	SLIT1	O75093	1534 aa		13.9	□□□□□ -0.19
RBM23-229	ENST00000557403	IQSEC2	Q5JU85	1478 aa		13.89	□□□□□ -0.19
RBM23-229	ENST00000557403	SCAF11	Q99590	1463 aa	Known RBP	13.89	□□□□□ -0.19
RBM23-229	ENST00000557403	ARHGAP23	Q9P227	1491 aa		13.89	□□□□□ -0.19
RBM23-229	ENST00000557403	IDI1	Q13907	227 aa		13.88	□□□□□ -0.19
RBM23-229	ENST00000557403	MYO5B	Q9ULV0	1848 aa		13.87	□□□□□ -0.19
RBM23-229	ENST00000557403	NUP155	O75694	1391 aa		13.87	□□□□□ -0.19
RBM23-229	ENST00000557403	CPS1	P31327	1500 aa		13.85	□□□□□ -0.19
RBM23-229	ENST00000557403	TMEM2	Q9UHN6	1383 aa		13.85	□□□□□ -0.19
RBM23-229	ENST00000557403	LTK	P29376	864 aa		13.85	□□□□□ -0.19
RBM23-229	ENST00000557403	TXNDC2	Q86VQ3	553 aa		13.85	□□□□□ -0.19
RBM23-229	ENST00000557403	EID1	Q9Y6B2	187 aa		13.85	□□□□□ -0.19
RBM23-229	ENST00000557403	STRCP1	A6NGW2	1772 aa		13.84	□□□□□ -0.19
RBM23-229	ENST00000557403	NAIP	Q13075	1403 aa		13.84	□□□□□ -0.19
RBM23-229	ENST00000557403	SLC52A1	Q9NWF4	448 aa		13.84	□□□□□ -0.19
RBM23-229	ENST00000557403	TMEM131L	A2VDJ0	1609 aa		13.82	□□□□□ -0.2
RBM23-229	ENST00000557403	SPHKAP	Q2M3C7	1700 aa		13.82	□□□□□ -0.2
RBM23-229	ENST00000557403	HFM1	A2PYH4	1435 aa		13.81	□□□□□ -0.2
RBM23-229	ENST00000557403	UBAP1L	F5GYI3	381 aa		13.8	□□□□□ -0.2
RBM23-229	ENST00000557403	CHGA	P10645	457 aa	Known RBP	13.8	□□□□□ -0.2
RBM23-229	ENST00000557403	ZFYVE9	O95405	1425 aa		13.77	□□□□□ -0.21
RBM23-229	ENST00000557403	AKT1S1	Q96B36	256 aa		13.77	□□□□□ -0.21
RBM23-229	ENST00000557403	RIMS2	Q9UQ26	1411 aa		13.77	□□□□□ -0.21
RBM23-229	ENST00000557403	LRRC7	Q96NW7	1537 aa		13.76	□□□□□ -0.21
RBM23-229	ENST00000557403	CHRDL2	Q6WN34	429 aa		13.76	□□□□□ -0.21
RBM23-229	ENST00000557403	TRIM52	Q96A61	297 aa		13.76	□□□□□ -0.21
RBM23-229	ENST00000557403	PPP1R15A	O75807	674 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM23-229	ENST00000557403	BCAN	Q96GW7	911 aa		13.75	□□□□□ -0.21
RBM23-229	ENST00000557403	SLC26A8	Q96RN1	970 aa		13.75	□□□□□ -0.21
RBM23-229	ENST00000557403	CLTCL1	P53675	1640 aa		13.75	□□□□□ -0.21
RBM23-229	ENST00000557403	TRPM2	O94759	1503 aa		13.74	□□□□□ -0.21
RBM23-229	ENST00000557403	XIRP1	Q702N8	1843 aa	Known RBP	13.74	□□□□□ -0.21
RBM23-229	ENST00000557403	PLEKHG1	Q9ULL1	1385 aa		13.72	□□□□□ -0.21
RBM23-229	ENST00000557403	HDGF	P51858	240 aa	Known RBP	13.72	□□□□□ -0.21
RBM23-229	ENST00000557403	PIP4K2B	P78356	416 aa		13.72	□□□□□ -0.21
RBM23-229	ENST00000557403	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.72	□□□□□ -0.21
RBM23-229	ENST00000557403	KIF1B	O60333	1816 aa		13.71	□□□□□ -0.21
RBM23-229	ENST00000557403	NWD1	Q149M9	1564 aa		13.71	□□□□□ -0.21
RBM23-229	ENST00000557403	TOM1	O60784	492 aa		13.71	□□□□□ -0.21
RBM23-229	ENST00000557403	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
RBM23-229	ENST00000557403	ALK	Q9UM73	1620 aa		13.71	□□□□□ -0.22
RBM23-229	ENST00000557403	MKRN4P	Q13434	485 aa	Predicted RBP	13.7	□□□□□ -0.22
RBM23-229	ENST00000557403	CHD2	O14647	1828 aa	Known RBP	13.69	□□□□□ -0.22
RBM23-229	ENST00000557403	REM2	Q8IYK8	340 aa	Predicted RBP	13.69	□□□□□ -0.22
RBM23-229	ENST00000557403	NKTR	P30414	1462 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-229	ENST00000557403	DIP2A	Q14689	1571 aa		13.68	□□□□□ -0.22
RBM23-229	ENST00000557403	KCNA6	P17658	529 aa		13.68	□□□□□ -0.22
RBM23-229	ENST00000557403	ZNF326	Q5BKZ1	582 aa	Known RBP	13.68	□□□□□ -0.22
RBM23-229	ENST00000557403	TMEM94	Q12767	1356 aa		13.67	□□□□□ -0.22
RBM23-229	ENST00000557403	ADAMTS13	Q76LX8	1427 aa		13.66	□□□□□ -0.22
RBM23-229	ENST00000557403	NEXMIF	Q5QGS0	1516 aa		13.65	□□□□□ -0.22
RBM23-229	ENST00000557403	NRXN3	Q9Y4C0	1643 aa		13.65	□□□□□ -0.22
RBM23-229	ENST00000557403	PROSER2	Q86WR7	435 aa	Predicted RBP	13.65	□□□□□ -0.22
RBM23-229	ENST00000557403	RBM33	Q96EV2	1170 aa	Known RBP	13.65	□□□□□ -0.22
RBM23-229	ENST00000557403	SETBP1	Q9Y6X0	1596 aa		13.64	□□□□□ -0.23
RBM23-229	ENST00000557403	TBX22	Q9Y458	520 aa		13.64	□□□□□ -0.23
RBM23-229	ENST00000557403	SETD5	Q9C0A6	1442 aa		13.64	□□□□□ -0.23
RBM23-229	ENST00000557403	HSPA1L	P34931	641 aa		13.63	□□□□□ -0.23
RBM23-229	ENST00000557403	MPHOSPH9	Q99550	1183 aa		13.61	□□□□□ -0.23
RBM23-229	ENST00000557403	PPL	O60437	1756 aa		13.6	□□□□□ -0.23
RBM23-229	ENST00000557403	PIK3R4	Q99570	1358 aa		13.6	□□□□□ -0.23
RBM23-229	ENST00000557403	RAB3GAP2	Q9H2M9	1393 aa		13.6	□□□□□ -0.23
RBM23-229	ENST00000557403	DISP3	Q9P2K9	1392 aa		13.6	□□□□□ -0.23
RBM23-229	ENST00000557403	MSH6	P52701	1360 aa		13.59	□□□□□ -0.23
RBM23-229	ENST00000557403	XRN1	Q8IZH2	1706 aa	Known RBP	13.59	□□□□□ -0.23
RBM23-229	ENST00000557403	CCDC144A	A2RUR9	1427 aa		13.59	□□□□□ -0.23
RBM23-229	ENST00000557403	PTPRU	Q92729	1446 aa		13.59	□□□□□ -0.23
RBM23-229	ENST00000557403	SPDYE2B	A6NHP3	402 aa		13.58	□□□□□ -0.24
RBM23-229	ENST00000557403	SPDYE6	P0CI01	402 aa		13.58	□□□□□ -0.24
RBM23-229	ENST00000557403	SPDYE2	Q495Y8	402 aa		13.58	□□□□□ -0.24
RBM23-229	ENST00000557403	ROBO1	Q9Y6N7	1651 aa		13.58	□□□□□ -0.24
RBM23-229	ENST00000557403	C14orf37	Q86TY3	774 aa		13.57	□□□□□ -0.24
RBM23-229	ENST00000557403	AMOTL2	Q9Y2J4	779 aa		13.57	□□□□□ -0.24
RBM23-229	ENST00000557403	MET	P08581	1390 aa		13.57	□□□□□ -0.24
RBM23-229	ENST00000557403	SETD1A	O15047	1707 aa	Known RBP	13.56	□□□□□ -0.24
RBM23-229	ENST00000557403	PITPNM1	O00562	1244 aa		13.56	□□□□□ -0.24
RBM23-229	ENST00000557403	ACIN1	Q9UKV3	1341 aa	Known RBP	13.56	□□□□□ -0.24
RBM23-229	ENST00000557403	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.56	□□□□□ -0.24
RBM23-229	ENST00000557403	IFT172	Q9UG01	1749 aa		13.56	□□□□□ -0.24
RBM23-229	ENST00000557403	MED1	Q15648	1581 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM23-229	ENST00000557403	VGF	O15240	615 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM23-229	ENST00000557403	RPGRIP1L	Q68CZ1	1315 aa		13.54	□□□□□ -0.24
RBM23-229	ENST00000557403	FAM135B	Q49AJ0	1406 aa		13.54	□□□□□ -0.24
RBM23-229	ENST00000557403	NCOA3	Q9Y6Q9	1424 aa		13.54	□□□□□ -0.24
RBM23-229	ENST00000557403	RGL3	Q3MIN7	710 aa		13.53	□□□□□ -0.24
RBM23-229	ENST00000557403	SPATA31E1	Q6ZUB1	1445 aa		13.53	□□□□□ -0.24
RBM23-229	ENST00000557403	PHLPP1	O60346	1717 aa		13.5	□□□□□ -0.25

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