RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 RSPH4AQ5TD94 716 aa8.74□□□□□ -1.01
CHD8-212ENST00000557329 BARGINQ6ZT62 677 aa8.74□□□□□ -1.01
CHD8-212ENST00000557329 KRI1Q8N9T8 703 aaKnown RBP8.74□□□□□ -1.01
CHD8-212ENST00000557329 ZC3H15Q8WU90 426 aaKnown RBP8.74□□□□□ -1.01
CHD8-212ENST00000557329 GFRA3O60609 400 aa8.73□□□□□ -1.01
CHD8-212ENST00000557329 TRAF7Q6Q0C0 670 aa8.73□□□□□ -1.01
CHD8-212ENST00000557329 EYA1Q99502 592 aa8.73□□□□□ -1.01
CHD8-212ENST00000557329 LCE2BO14633 110 aa8.72□□□□□ -1.01
CHD8-212ENST00000557329 SAMD7Q7Z3H4 446 aa8.72□□□□□ -1.01
CHD8-212ENST00000557329 SLF2Q8IX21 1173 aa8.72□□□□□ -1.01
CHD8-212ENST00000557329 FAM198AQ9UFP1 575 aa8.72□□□□□ -1.01
CHD8-212ENST00000557329 IRF6O14896 467 aa8.71□□□□□ -1.02
CHD8-212ENST00000557329 IL21Q9HBE4 155 aa8.71□□□□□ -1.02
CHD8-212ENST00000557329 METTL3Q86U44 580 aaKnown RBP8.7□□□□□ -1.02
CHD8-212ENST00000557329 PXYLP1Q8TE99 480 aa8.7□□□□□ -1.02
CHD8-212ENST00000557329 MTRQ99707 1265 aa8.7□□□□□ -1.02
CHD8-212ENST00000557329 PRR14Q9BWN1 585 aa8.7□□□□□ -1.02
CHD8-212ENST00000557329 PRKD2Q9BZL6 878 aa8.7□□□□□ -1.02
CHD8-212ENST00000557329 V9GY48 417 aaPredicted RBP8.7□□□□□ -1.02
CHD8-212ENST00000557329 SMAPO00193 183 aa8.69□□□□□ -1.02
CHD8-212ENST00000557329 NRG2O14511 850 aaPredicted RBP8.69□□□□□ -1.02
CHD8-212ENST00000557329 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
CHD8-212ENST00000557329 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
CHD8-212ENST00000557329 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
CHD8-212ENST00000557329 SULF1Q8IWU6 871 aa8.67□□□□□ -1.02
CHD8-212ENST00000557329 AK7Q96M32 723 aa8.66□□□□□ -1.02
CHD8-212ENST00000557329 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
CHD8-212ENST00000557329 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
CHD8-212ENST00000557329 C3orf80F5H4A9 247 aa8.65□□□□□ -1.02
CHD8-212ENST00000557329 FECHP22830 423 aa8.65□□□□□ -1.02
CHD8-212ENST00000557329 CLCN1P35523 988 aa8.63□□□□□ -1.03
CHD8-212ENST00000557329 SWT1Q5T5J6 900 aaKnown RBP8.63□□□□□ -1.03
CHD8-212ENST00000557329 ZNF516Q92618 1163 aa8.63□□□□□ -1.03
CHD8-212ENST00000557329 CCDC102AQ96A19 550 aa8.63□□□□□ -1.03
CHD8-212ENST00000557329 NISCHQ9Y2I1 1504 aa8.62□□□□□ -1.03
CHD8-212ENST00000557329 APLP1P51693 650 aa8.61□□□□□ -1.03
CHD8-212ENST00000557329 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
CHD8-212ENST00000557329 GGCXP38435 758 aa8.6□□□□□ -1.03
CHD8-212ENST00000557329 AMHR2Q16671 573 aa8.6□□□□□ -1.03
CHD8-212ENST00000557329 GPCPD1Q9NPB8 672 aa8.6□□□□□ -1.03
CHD8-212ENST00000557329 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
CHD8-212ENST00000557329 RNF40O75150 1001 aa8.58□□□□□ -1.04
CHD8-212ENST00000557329 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
CHD8-212ENST00000557329 NKX2-3Q8TAU0 364 aa8.58□□□□□ -1.04
CHD8-212ENST00000557329 PDZRN3Q9UPQ7 1066 aa8.57□□□□□ -1.04
CHD8-212ENST00000557329 GRIPAP1Q4V328 841 aa8.56□□□□□ -1.04
CHD8-212ENST00000557329 TRIM66O15016 1216 aa8.55□□□□□ -1.04
CHD8-212ENST00000557329 TTLL12Q14166 644 aaPredicted RBP8.55□□□□□ -1.04
CHD8-212ENST00000557329 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
CHD8-212ENST00000557329 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
CHD8-212ENST00000557329 ZNF787Q6DD87 383 aa8.54□□□□□ -1.04
CHD8-212ENST00000557329 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
CHD8-212ENST00000557329 ZPR1O75312 459 aa8.53□□□□□ -1.04
CHD8-212ENST00000557329 COPS2P61201 443 aa8.53□□□□□ -1.04
CHD8-212ENST00000557329 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
CHD8-212ENST00000557329 SLC24A3Q9HC58 644 aa8.53□□□□□ -1.04
CHD8-212ENST00000557329 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
CHD8-212ENST00000557329 ACTN4O43707 911 aaKnown RBP8.52□□□□□ -1.05
CHD8-212ENST00000557329 USP46P62068 366 aa8.52□□□□□ -1.05
CHD8-212ENST00000557329 CFHP08603 1231 aa8.51□□□□□ -1.05
CHD8-212ENST00000557329 TPRNQ4KMQ1 711 aa8.51□□□□□ -1.05
CHD8-212ENST00000557329 FAM217BQ9NTX9 383 aaPredicted RBP8.51□□□□□ -1.05
CHD8-212ENST00000557329 GCGRP47871 477 aa8.5□□□□□ -1.05
CHD8-212ENST00000557329 PDE4DQ08499 809 aa8.5□□□□□ -1.05
CHD8-212ENST00000557329 CD46P15529 392 aa8.49□□□□□ -1.05
CHD8-212ENST00000557329 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
CHD8-212ENST00000557329 NR1I2O75469 434 aa8.48□□□□□ -1.05
CHD8-212ENST00000557329 SLC10A3P09131 477 aa8.48□□□□□ -1.05
CHD8-212ENST00000557329 SSTR3P32745 418 aaPredicted RBP8.48□□□□□ -1.05
CHD8-212ENST00000557329 GIGYF2Q6Y7W6 1299 aaKnown RBP8.48□□□□□ -1.05
CHD8-212ENST00000557329 ATP6V1AP38606 617 aa8.47□□□□□ -1.05
CHD8-212ENST00000557329 SLC19A1P41440 591 aa8.47□□□□□ -1.05
CHD8-212ENST00000557329 TRIM67Q6ZTA4 783 aa8.47□□□□□ -1.05
CHD8-212ENST00000557329 RNF223E7ERA6 249 aa8.46□□□□□ -1.06
CHD8-212ENST00000557329 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
CHD8-212ENST00000557329 ZNF775Q96BV0 537 aaPredicted RBP8.46□□□□□ -1.06
CHD8-212ENST00000557329 KDM4AO75164 1064 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PRR20EP86478 221 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PRR20CP86479 221 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PRR20DP86480 221 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PRR20BP86481 221 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PRR20AP86496 221 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 PARP9Q8IXQ6 854 aa8.45□□□□□ -1.06
CHD8-212ENST00000557329 DGAT1O75907 488 aa8.44□□□□□ -1.06
CHD8-212ENST00000557329 Q3C1V9 767 aa8.44□□□□□ -1.06
CHD8-212ENST00000557329 SPRYD7Q5W111 196 aa8.44□□□□□ -1.06
CHD8-212ENST00000557329 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
CHD8-212ENST00000557329 EMID1Q96A84 441 aaPredicted RBP8.44□□□□□ -1.06
CHD8-212ENST00000557329 SALL2Q9Y467 1007 aaPredicted RBP8.44□□□□□ -1.06
CHD8-212ENST00000557329 GJA5P36382 358 aa8.43□□□□□ -1.06
CHD8-212ENST00000557329 ZNF598Q86UK7 904 aaKnown RBP8.43□□□□□ -1.06
CHD8-212ENST00000557329 ANKLE1Q8NAG6 615 aa8.43□□□□□ -1.06
CHD8-212ENST00000557329 NLRP7Q8WX94 980 aa8.43□□□□□ -1.06
CHD8-212ENST00000557329 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
CHD8-212ENST00000557329 RSPH6AQ9H0K4 717 aa8.43□□□□□ -1.06
CHD8-212ENST00000557329 MYT1Q01538 1121 aa8.41□□□□□ -1.06
CHD8-212ENST00000557329 PKDCCQ504Y2 493 aa8.41□□□□□ -1.06
CHD8-212ENST00000557329 BEGAINQ9BUH8 593 aa8.4□□□□□ -1.06
CHD8-212ENST00000557329 FUT2Q10981 343 aa8.39□□□□□ -1.07
CHD8-212ENST00000557329 MORN1Q5T089 497 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms