RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 SALL2Q9Y467 1007 aaPredicted RBP16.63■□□□□ 0.25
APEX1-216ENST00000557159 ERBINQ96RT1 1412 aa16.63■□□□□ 0.25
APEX1-216ENST00000557159 IL27Q8NEV9 243 aa16.63■□□□□ 0.25
APEX1-216ENST00000557159 FBXO41Q8TF61 875 aa16.63■□□□□ 0.25
APEX1-216ENST00000557159 AGLP35573 1532 aa16.62■□□□□ 0.25
APEX1-216ENST00000557159 KIF3BO15066 747 aa16.61■□□□□ 0.25
APEX1-216ENST00000557159 SIGLEC1Q9BZZ2 1709 aa16.61■□□□□ 0.25
APEX1-216ENST00000557159 RCAN3Q9UKA8 241 aa16.61■□□□□ 0.25
APEX1-216ENST00000557159 EXOC6Q8TAG9 804 aa16.58■□□□□ 0.24
APEX1-216ENST00000557159 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
APEX1-216ENST00000557159 UNC13BO14795 1591 aa16.56■□□□□ 0.24
APEX1-216ENST00000557159 FAM135AQ9P2D6 1515 aa16.56■□□□□ 0.24
APEX1-216ENST00000557159 GGT6Q6P531 493 aa16.56■□□□□ 0.24
APEX1-216ENST00000557159 GSE1Q14687 1217 aa16.55■□□□□ 0.24
APEX1-216ENST00000557159 PARD3Q8TEW0 1356 aa16.55■□□□□ 0.24
APEX1-216ENST00000557159 MLECQ14165 292 aa16.53■□□□□ 0.24
APEX1-216ENST00000557159 NLRP13Q86W25 1043 aa16.53■□□□□ 0.24
APEX1-216ENST00000557159 PPP6R1Q9UPN7 881 aa16.53■□□□□ 0.24
APEX1-216ENST00000557159 RNF17Q9BXT8 1623 aaKnown RBP16.52■□□□□ 0.24
APEX1-216ENST00000557159 BLMP54132 1417 aaPredicted RBP16.52■□□□□ 0.24
APEX1-216ENST00000557159 DEPDC5O75140 1603 aa16.52■□□□□ 0.23
APEX1-216ENST00000557159 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.23
APEX1-216ENST00000557159 NPM2Q86SE8 214 aaKnown RBP16.51■□□□□ 0.23
APEX1-216ENST00000557159 IQGAP3Q86VI3 1631 aa16.51■□□□□ 0.23
APEX1-216ENST00000557159 MROH1Q8NDA8 1641 aa16.51■□□□□ 0.23
APEX1-216ENST00000557159 UBE2Q2Q8WVN8 375 aa16.5■□□□□ 0.23
APEX1-216ENST00000557159 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.231e-8■□□□□ 10
APEX1-216ENST00000557159 PRDM15P57071 1507 aaPredicted RBP16.5■□□□□ 0.23
APEX1-216ENST00000557159 LAMC1P11047 1609 aa16.48■□□□□ 0.23
APEX1-216ENST00000557159 CCDC144AA2RUR9 1427 aa16.48■□□□□ 0.23
APEX1-216ENST00000557159 VWDEQ8N2E2 1590 aa16.47■□□□□ 0.23
APEX1-216ENST00000557159 KANK1Q14678 1352 aa16.47■□□□□ 0.23
APEX1-216ENST00000557159 NFKBIBQ15653 356 aa16.47■□□□□ 0.23
APEX1-216ENST00000557159 LMTK3Q96Q04 1460 aa16.46■□□□□ 0.23
APEX1-216ENST00000557159 KDM2BQ8NHM5 1336 aa16.46■□□□□ 0.23
APEX1-216ENST00000557159 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
APEX1-216ENST00000557159 ADAMTSL3P82987 1691 aa16.44■□□□□ 0.22
APEX1-216ENST00000557159 ESF1Q9H501 851 aaKnown RBP16.44■□□□□ 0.22
APEX1-216ENST00000557159 ABCC3O15438 1527 aa16.43■□□□□ 0.22
APEX1-216ENST00000557159 LMTK2Q8IWU2 1503 aa16.42■□□□□ 0.22
APEX1-216ENST00000557159 CENPQQ7L2Z9 268 aaPredicted RBP16.42■□□□□ 0.22
APEX1-216ENST00000557159 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
APEX1-216ENST00000557159 TRPM1Q7Z4N2 1603 aa16.41■□□□□ 0.22
APEX1-216ENST00000557159 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
APEX1-216ENST00000557159 RTN4Q9NQC3 1192 aaKnown RBP16.41■□□□□ 0.22
APEX1-216ENST00000557159 PER1O15534 1290 aaPredicted RBP16.4■□□□□ 0.22
APEX1-216ENST00000557159 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
APEX1-216ENST00000557159 ZMYM3Q14202 1370 aa16.4■□□□□ 0.22
APEX1-216ENST00000557159 GPRASP1Q5JY77 1395 aa16.4■□□□□ 0.22
APEX1-216ENST00000557159 MADDQ8WXG6 1647 aa16.4■□□□□ 0.22
APEX1-216ENST00000557159 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
APEX1-216ENST00000557159 ST20-MTHFSA0A0A6YYL1 179 aa16.4■□□□□ 0.22
APEX1-216ENST00000557159 FAM43AQ8N2R8 423 aa16.4■□□□□ 0.22
APEX1-216ENST00000557159 VIRMAQ69YN4 1812 aaKnown RBP16.39■□□□□ 0.22
APEX1-216ENST00000557159 FER1L4A9Z1Z3 1794 aa16.39■□□□□ 0.21
APEX1-216ENST00000557159 FAM161AQ3B820 660 aa16.39■□□□□ 0.21
APEX1-216ENST00000557159 POLR3GLQ9BT43 218 aa16.39■□□□□ 0.21
APEX1-216ENST00000557159 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
APEX1-216ENST00000557159 BRPF3Q9ULD4 1205 aa16.39■□□□□ 0.21
APEX1-216ENST00000557159 CEP152O94986 1710 aa16.38■□□□□ 0.21
APEX1-216ENST00000557159 CLTCQ00610 1675 aaKnown RBP16.38■□□□□ 0.21
APEX1-216ENST00000557159 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
APEX1-216ENST00000557159 PLA2R1Q13018 1463 aa16.38■□□□□ 0.21
APEX1-216ENST00000557159 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
APEX1-216ENST00000557159 CRBNQ96SW2 442 aa16.38■□□□□ 0.21
APEX1-216ENST00000557159 NPATQ14207 1427 aa16.37■□□□□ 0.21
APEX1-216ENST00000557159 SOCS7O14512 581 aa16.37■□□□□ 0.21
APEX1-216ENST00000557159 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
APEX1-216ENST00000557159 TET3O43151 1660 aa16.37■□□□□ 0.21
APEX1-216ENST00000557159 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
APEX1-216ENST00000557159 EFCAB6Q5THR3 1501 aa16.36■□□□□ 0.21
APEX1-216ENST00000557159 MROH2AA6NES4 1674 aa16.35■□□□□ 0.21
APEX1-216ENST00000557159 PRAG1Q86YV5 1406 aa16.35■□□□□ 0.21
APEX1-216ENST00000557159 CAMSAP1Q5T5Y3 1602 aa16.35■□□□□ 0.21
APEX1-216ENST00000557159 CEBPAP49715 358 aaPredicted RBP16.35■□□□□ 0.21
APEX1-216ENST00000557159 C8orf34Q49A92 452 aa16.34■□□□□ 0.21
APEX1-216ENST00000557159 RIMS1Q86UR5 1692 aaKnown RBP16.34■□□□□ 0.21
APEX1-216ENST00000557159 PTPRMP28827 1452 aa16.34■□□□□ 0.21
APEX1-216ENST00000557159 CDCA7LQ96GN5 454 aa16.33■□□□□ 0.21
APEX1-216ENST00000557159 EIF3AQ14152 1382 aaKnown RBP16.33■□□□□ 0.2
APEX1-216ENST00000557159 FBXO31Q5XUX0 539 aaPredicted RBP16.33■□□□□ 0.2
APEX1-216ENST00000557159 C3P01024 1663 aa16.31■□□□□ 0.2
APEX1-216ENST00000557159 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
APEX1-216ENST00000557159 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
APEX1-216ENST00000557159 PTPRTO14522 1441 aa16.3■□□□□ 0.2
APEX1-216ENST00000557159 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
APEX1-216ENST00000557159 NOS1P29475 1434 aa16.29■□□□□ 0.2
APEX1-216ENST00000557159 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
APEX1-216ENST00000557159 TRPM2O94759 1503 aa16.28■□□□□ 0.2
APEX1-216ENST00000557159 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
APEX1-216ENST00000557159 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
APEX1-216ENST00000557159 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
APEX1-216ENST00000557159 PLIN1O60240 522 aa16.28■□□□□ 0.2
APEX1-216ENST00000557159 ERVK-7P63135 1459 aa16.28■□□□□ 0.2
APEX1-216ENST00000557159 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
APEX1-216ENST00000557159 SPATA31D1Q6ZQQ2 1576 aa16.27■□□□□ 0.2
APEX1-216ENST00000557159 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
APEX1-216ENST00000557159 DUSP27Q5VZP5 1158 aa16.26■□□□□ 0.19
APEX1-216ENST00000557159 PREX1Q8TCU6 1659 aa16.26■□□□□ 0.19
APEX1-216ENST00000557159 SENP3-EIF4A1A0A087X0R7 540 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms