RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SETBP1Q9Y6X0 1596 aa20.26■□□□□ 0.83
PSEN1-220ENST00000557037 IDI1Q13907 227 aa20.26■□□□□ 0.83
PSEN1-220ENST00000557037 QTRT2Q9H974 415 aaKnown RBP20.26■□□□□ 0.83
PSEN1-220ENST00000557037 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
PSEN1-220ENST00000557037 RBM6P78332 1123 aaKnown RBP20.25■□□□□ 0.83
PSEN1-220ENST00000557037 ARHGAP31Q2M1Z3 1444 aa20.25■□□□□ 0.83
PSEN1-220ENST00000557037 AHDC1Q5TGY3 1603 aaPredicted RBP20.24■□□□□ 0.83
PSEN1-220ENST00000557037 C8orf37Q96NL8 207 aa20.23■□□□□ 0.83
PSEN1-220ENST00000557037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.23■□□□□ 0.832e-7■□□□□ 10.6
PSEN1-220ENST00000557037 FOXD1Q16676 465 aa20.2■□□□□ 0.82
PSEN1-220ENST00000557037 ATAD2Q6PL18 1390 aa20.2■□□□□ 0.82
PSEN1-220ENST00000557037 ATF3P18847 181 aa20.19■□□□□ 0.82
PSEN1-220ENST00000557037 DIP2AQ14689 1571 aa20.19■□□□□ 0.82
PSEN1-220ENST00000557037 MAST1Q9Y2H9 1570 aa20.18■□□□□ 0.82
PSEN1-220ENST00000557037 CADPS2Q86UW7 1296 aa20.18■□□□□ 0.82
PSEN1-220ENST00000557037 BRINP3Q76B58 766 aa20.17■□□□□ 0.82
PSEN1-220ENST00000557037 CHD2O14647 1828 aaKnown RBP20.17■□□□□ 0.82
PSEN1-220ENST00000557037 C19orf44Q9H6X5 657 aa20.15■□□□□ 0.82
PSEN1-220ENST00000557037 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.15■□□□□ 0.82
PSEN1-220ENST00000557037 DUOX2Q9NRD8 1548 aa20.13■□□□□ 0.81
PSEN1-220ENST00000557037 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
PSEN1-220ENST00000557037 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
PSEN1-220ENST00000557037 NCOA3Q9Y6Q9 1424 aa20.12■□□□□ 0.81
PSEN1-220ENST00000557037 NGLY1Q96IV0 654 aa20.12■□□□□ 0.81
PSEN1-220ENST00000557037 PLEKHG1Q9ULL1 1385 aa20.1■□□□□ 0.81
PSEN1-220ENST00000557037 ADAMTS2O95450 1211 aa20.1■□□□□ 0.81
PSEN1-220ENST00000557037 SETD5Q9C0A6 1442 aa20.09■□□□□ 0.81
PSEN1-220ENST00000557037 KANK1Q14678 1352 aa20.08■□□□□ 0.81
PSEN1-220ENST00000557037 KIF15Q9NS87 1388 aa20.08■□□□□ 0.81
PSEN1-220ENST00000557037 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
PSEN1-220ENST00000557037 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
PSEN1-220ENST00000557037 LRRC59Q96AG4 307 aaKnown RBP20.07■□□□□ 0.8
PSEN1-220ENST00000557037 TBX22Q9Y458 520 aa20.07■□□□□ 0.8
PSEN1-220ENST00000557037 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
PSEN1-220ENST00000557037 ASXL1Q8IXJ9 1541 aa20.06■□□□□ 0.8
PSEN1-220ENST00000557037 RIMS2Q9UQ26 1411 aa20.05■□□□□ 0.8
PSEN1-220ENST00000557037 PNPLA6Q8IY17 1366 aa20.05■□□□□ 0.8
PSEN1-220ENST00000557037 NOS1P29475 1434 aa20.04■□□□□ 0.8
PSEN1-220ENST00000557037 ERBINQ96RT1 1412 aa20.03■□□□□ 0.8
PSEN1-220ENST00000557037 SLC52A1Q9NWF4 448 aa20.03■□□□□ 0.8
PSEN1-220ENST00000557037 USP21Q9UK80 565 aa20.03■□□□□ 0.8
PSEN1-220ENST00000557037 MYO5BQ9ULV0 1848 aa20.02■□□□□ 0.79
PSEN1-220ENST00000557037 HDGFP51858 240 aaKnown RBP20.01■□□□□ 0.79
PSEN1-220ENST00000557037 TRPC5Q9UL62 973 aaPredicted RBP20.01■□□□□ 0.79
PSEN1-220ENST00000557037 EP400Q96L91 3159 aa20■□□□□ 0.79
PSEN1-220ENST00000557037 CCDC125Q86Z20 511 aa20■□□□□ 0.79
PSEN1-220ENST00000557037 NHSL1Q5SYE7 1610 aa19.99■□□□□ 0.79
PSEN1-220ENST00000557037 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
PSEN1-220ENST00000557037 ADAMTS13Q76LX8 1427 aa19.99■□□□□ 0.79
PSEN1-220ENST00000557037 AMOTL2Q9Y2J4 779 aa19.98■□□□□ 0.79
PSEN1-220ENST00000557037 MST1RQ04912 1400 aa19.97■□□□□ 0.79
PSEN1-220ENST00000557037 MYOM3Q5VTT5 1437 aa19.97■□□□□ 0.79
PSEN1-220ENST00000557037 CHGAP10645 457 aaKnown RBP19.96■□□□□ 0.79
PSEN1-220ENST00000557037 PTPRUQ92729 1446 aa19.94■□□□□ 0.78
PSEN1-220ENST00000557037 PIK3R4Q99570 1358 aa19.94■□□□□ 0.78
PSEN1-220ENST00000557037 GCC2Q8IWJ2 1684 aa19.94■□□□□ 0.78
PSEN1-220ENST00000557037 ATRNO75882 1429 aa19.93■□□□□ 0.78
PSEN1-220ENST00000557037 DCCP43146 1447 aa19.93■□□□□ 0.78
PSEN1-220ENST00000557037 DEFB132Q7Z7B7 95 aa19.93■□□□□ 0.78
PSEN1-220ENST00000557037 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
PSEN1-220ENST00000557037 ABCC5O15440 1437 aa19.92■□□□□ 0.78
PSEN1-220ENST00000557037 FNBP4Q8N3X1 1017 aaPredicted RBP19.91■□□□□ 0.78
PSEN1-220ENST00000557037 TMEM131LA2VDJ0 1609 aa19.91■□□□□ 0.78
PSEN1-220ENST00000557037 LRP5O75197 1615 aa19.91■□□□□ 0.78
PSEN1-220ENST00000557037 TRPM2O94759 1503 aa19.88■□□□□ 0.77
PSEN1-220ENST00000557037 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
PSEN1-220ENST00000557037 PSDA5PKW4 1024 aaPredicted RBP19.87■□□□□ 0.77
PSEN1-220ENST00000557037 CROCC2H7BZ55 1655 aa19.87■□□□□ 0.77
PSEN1-220ENST00000557037 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
PSEN1-220ENST00000557037 KANK4Q5T7N3 995 aaPredicted RBP19.85■□□□□ 0.77
PSEN1-220ENST00000557037 PTCH1Q13635 1447 aa19.85■□□□□ 0.77
PSEN1-220ENST00000557037 GJD4Q96KN9 370 aaPredicted RBP19.83■□□□□ 0.77
PSEN1-220ENST00000557037 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
PSEN1-220ENST00000557037 RPRD2Q5VT52 1461 aaKnown RBP19.81■□□□□ 0.76
PSEN1-220ENST00000557037 SF3B2Q13435 895 aaKnown RBP19.81■□□□□ 0.76
PSEN1-220ENST00000557037 DAPK1P53355 1430 aa19.81■□□□□ 0.76
PSEN1-220ENST00000557037 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
PSEN1-220ENST00000557037 XRN1Q8IZH2 1706 aaKnown RBP19.8■□□□□ 0.76
PSEN1-220ENST00000557037 HRCP23327 699 aa19.8■□□□□ 0.76
PSEN1-220ENST00000557037 SOS2Q07890 1332 aaPredicted RBP19.79■□□□□ 0.76
PSEN1-220ENST00000557037 ADGRL3Q9HAR2 1447 aa19.79■□□□□ 0.76
PSEN1-220ENST00000557037 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
PSEN1-220ENST00000557037 UNC13BO14795 1591 aa19.78■□□□□ 0.76
PSEN1-220ENST00000557037 ORAI2Q96SN7 254 aa19.78■□□□□ 0.76
PSEN1-220ENST00000557037 METP08581 1390 aa19.75■□□□□ 0.75
PSEN1-220ENST00000557037 PTPN23Q9H3S7 1636 aa19.75■□□□□ 0.75
PSEN1-220ENST00000557037 YY1P25490 414 aa19.74■□□□□ 0.75
PSEN1-220ENST00000557037 NALCNQ8IZF0 1738 aa19.73■□□□□ 0.75
PSEN1-220ENST00000557037 MYOM2P54296 1465 aa19.73■□□□□ 0.75
PSEN1-220ENST00000557037 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
PSEN1-220ENST00000557037 LAMC1P11047 1609 aa19.73■□□□□ 0.75
PSEN1-220ENST00000557037 BRWD3Q6RI45 1802 aa19.72■□□□□ 0.75
PSEN1-220ENST00000557037 NRXN3Q9Y4C0 1643 aa19.72■□□□□ 0.75
PSEN1-220ENST00000557037 GLI3P10071 1580 aa19.71■□□□□ 0.75
PSEN1-220ENST00000557037 COL22A1Q8NFW1 1626 aaPredicted RBP19.71■□□□□ 0.75
PSEN1-220ENST00000557037 SEPT12Q8IYM1 358 aa19.7■□□□□ 0.74
PSEN1-220ENST00000557037 UNC5CLQ8IV45 518 aa19.68■□□□□ 0.74
PSEN1-220ENST00000557037 XPCQ01831 940 aaPredicted RBP19.67■□□□□ 0.74
PSEN1-220ENST00000557037 MARF1Q9Y4F3 1742 aaKnown RBP19.67■□□□□ 0.74
PSEN1-220ENST00000557037 R3HDM1Q15032 1099 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms