RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 RYDENQ9NUL5 291 aaKnown RBP8.45□□□□□ -1.06
ATXN3-244ENST00000556898 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
ATXN3-244ENST00000556898 GTPBP6O43824 516 aaPredicted RBP8.44□□□□□ -1.06
ATXN3-244ENST00000556898 FHOD3Q2V2M9 1422 aa8.44□□□□□ -1.06
ATXN3-244ENST00000556898 FOSBP53539 338 aa8.43□□□□□ -1.06
ATXN3-244ENST00000556898 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
ATXN3-244ENST00000556898 DISP1Q96F81 1524 aa8.43□□□□□ -1.06
ATXN3-244ENST00000556898 UGGT2Q9NYU1 1516 aa8.43□□□□□ -1.06
ATXN3-244ENST00000556898 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-244ENST00000556898 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
ATXN3-244ENST00000556898 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-244ENST00000556898 SAMD9Q5K651 1589 aa8.42□□□□□ -1.06
ATXN3-244ENST00000556898 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-244ENST00000556898 KIAA0556O60303 1618 aa8.4□□□□□ -1.06
ATXN3-244ENST00000556898 PDE4AP27815 886 aa8.4□□□□□ -1.06
ATXN3-244ENST00000556898 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-244ENST00000556898 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-244ENST00000556898 LARP6Q9BRS8 491 aaKnown RBP8.39□□□□□ -1.07
ATXN3-244ENST00000556898 EFCAB5A4FU69 1503 aa8.39□□□□□ -1.07
ATXN3-244ENST00000556898 EVI5O60447 810 aa8.38□□□□□ -1.07
ATXN3-244ENST00000556898 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
ATXN3-244ENST00000556898 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
ATXN3-244ENST00000556898 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
ATXN3-244ENST00000556898 PTPN5P54829 565 aa8.37□□□□□ -1.07
ATXN3-244ENST00000556898 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
ATXN3-244ENST00000556898 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-244ENST00000556898 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-244ENST00000556898 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-244ENST00000556898 PPARGC1BQ86YN6 1023 aaKnown RBP8.36□□□□□ -1.07
ATXN3-244ENST00000556898 EMILIN3Q9NT22 766 aa8.36□□□□□ -1.07
ATXN3-244ENST00000556898 VPS8Q8N3P4 1428 aa8.36□□□□□ -1.07
ATXN3-244ENST00000556898 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-244ENST00000556898 ARID3CA6NKF2 412 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 PTPREP23469 700 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 PLCB2Q00722 1185 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 MFSD10Q14728 455 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 ATP1B4Q9UN42 357 aaPredicted RBP8.35□□□□□ -1.07
ATXN3-244ENST00000556898 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-244ENST00000556898 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
ATXN3-244ENST00000556898 DDX27Q96GQ7 796 aaKnown RBP8.34□□□□□ -1.07
ATXN3-244ENST00000556898 PCF11O94913 1555 aaKnown RBP8.34□□□□□ -1.07
ATXN3-244ENST00000556898 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-244ENST00000556898 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-244ENST00000556898 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-244ENST00000556898 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
ATXN3-244ENST00000556898 FMN1Q68DA7 1419 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 MAP3K9P80192 1104 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 SPRYD3Q8NCJ5 442 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-244ENST00000556898 CASKIN1Q8WXD9 1431 aa8.3□□□□□ -1.08
ATXN3-244ENST00000556898 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-244ENST00000556898 COL9A1P20849 921 aa8.29□□□□□ -1.08
ATXN3-244ENST00000556898 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-244ENST00000556898 PAXIP1Q6ZW49 1069 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-244ENST00000556898 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
ATXN3-244ENST00000556898 WNT2BQ93097 391 aa8.29□□□□□ -1.08
ATXN3-244ENST00000556898 ABCA8O94911 1581 aa8.29□□□□□ -1.08
ATXN3-244ENST00000556898 LRRIQ1Q96JM4 1722 aa8.29□□□□□ -1.08
ATXN3-244ENST00000556898 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
ATXN3-244ENST00000556898 NUP153P49790 1475 aaKnown RBP8.28□□□□□ -1.08
ATXN3-244ENST00000556898 SOCS7O14512 581 aa8.28□□□□□ -1.08
ATXN3-244ENST00000556898 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-244ENST00000556898 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
ATXN3-244ENST00000556898 CDK13Q14004 1512 aaKnown RBP8.28□□□□□ -1.08
ATXN3-244ENST00000556898 FYCO1Q9BQS8 1478 aa8.27□□□□□ -1.09
ATXN3-244ENST00000556898 HECW1Q76N89 1606 aa8.26□□□□□ -1.09
ATXN3-244ENST00000556898 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
ATXN3-244ENST00000556898 CFAP44Q96MT7 982 aa8.26□□□□□ -1.09
ATXN3-244ENST00000556898 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
ATXN3-244ENST00000556898 TIAM1Q13009 1591 aa8.25□□□□□ -1.09
ATXN3-244ENST00000556898 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-244ENST00000556898 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-244ENST00000556898 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-244ENST00000556898 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
ATXN3-244ENST00000556898 IFFO2Q5TF58 517 aa8.24□□□□□ -1.09
ATXN3-244ENST00000556898 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-244ENST00000556898 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-244ENST00000556898 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-244ENST00000556898 PHF14O94880 888 aa8.22□□□□□ -1.09
ATXN3-244ENST00000556898 TYW1BQ6NUM6 668 aa8.22□□□□□ -1.09
ATXN3-244ENST00000556898 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
ATXN3-244ENST00000556898 RABGEF1Q9UJ41 708 aa8.22□□□□□ -1.09
ATXN3-244ENST00000556898 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-244ENST00000556898 LRRC9Q6ZRR7 1453 aa8.21□□□□□ -1.09
ATXN3-244ENST00000556898 CAMK2BQ13554 666 aa8.21□□□□□ -1.1
ATXN3-244ENST00000556898 CCDC18Q5T9S5 1454 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 MAP3K1Q13233 1512 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 A0A0G2JS52 829 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 DPYSL4O14531 572 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 BCAMP50895 628 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
ATXN3-244ENST00000556898 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-244ENST00000556898 FBXW7Q969H0 707 aa8.19□□□□□ -1.1
ATXN3-244ENST00000556898 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-244ENST00000556898 SLC24A1O60721 1099 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms