RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 CLIP1P30622 1438 aa7.21□□□□□ -1.25
PCNX1-214ENST00000556849 RRBP1Q9P2E9 1410 aaKnown RBP7.21□□□□□ -1.25
PCNX1-214ENST00000556849 E9PSI1 815 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 ANP32CO43423 234 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 BRD1O95696 1058 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 RFC5P40937 340 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 RBM25P49756 843 aaKnown RBP7.21□□□□□ -1.26
PCNX1-214ENST00000556849 MYSM1Q5VVJ2 828 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.26
PCNX1-214ENST00000556849 PHF12Q96QT6 1004 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 TMEM121BQ9BXQ6 578 aaPredicted RBP7.21□□□□□ -1.26
PCNX1-214ENST00000556849 USTQ9Y2C2 406 aa7.21□□□□□ -1.26
PCNX1-214ENST00000556849 BAZ1AQ9NRL2 1556 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-214ENST00000556849 PPM1GO15355 546 aaPredicted RBP7.2□□□□□ -1.26
PCNX1-214ENST00000556849 ANP32AP39687 249 aaKnown RBP7.2□□□□□ -1.26
PCNX1-214ENST00000556849 PPP2R2DQ66LE6 453 aa7.2□□□□□ -1.26
PCNX1-214ENST00000556849 AMOTL2Q9Y2J4 779 aa7.2□□□□□ -1.26
PCNX1-214ENST00000556849 TTLL13PA6NNM8 815 aa7.19□□□□□ -1.26
PCNX1-214ENST00000556849 EVI5O60447 810 aa7.19□□□□□ -1.26
PCNX1-214ENST00000556849 OATP04181 439 aa7.19□□□□□ -1.26
PCNX1-214ENST00000556849 PRIM1P49642 420 aaKnown RBP7.19□□□□□ -1.26
PCNX1-214ENST00000556849 UPF1Q92900 1129 aaKnown RBP eCLIP7.19□□□□□ -1.26
PCNX1-214ENST00000556849 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
PCNX1-214ENST00000556849 CCDC88BA6NC98 1476 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 NCAPD3P42695 1498 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 G3V3G9 751 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 FOXD4L5Q5VV16 416 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-214ENST00000556849 FAM43AQ8N2R8 423 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 FOXD4L4Q8WXT5 416 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-214ENST00000556849 PBXIP1Q96AQ6 731 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 MS4A3Q96HJ5 214 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 EPAS1Q99814 870 aa7.18□□□□□ -1.26
PCNX1-214ENST00000556849 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
PCNX1-214ENST00000556849 EN1Q05925 392 aaPredicted RBP7.17□□□□□ -1.26
PCNX1-214ENST00000556849 TUSC1Q2TAM9 212 aa7.17□□□□□ -1.26
PCNX1-214ENST00000556849 DPY19L2Q6NUT2 758 aa7.17□□□□□ -1.26
PCNX1-214ENST00000556849 PHOX2BQ99453 314 aa7.17□□□□□ -1.26
PCNX1-214ENST00000556849 TRPC6Q9Y210 931 aa7.17□□□□□ -1.26
PCNX1-214ENST00000556849 BOLA1Q9Y3E2 137 aa7.17□□□□□ -1.26
PCNX1-214ENST00000556849 SMARCA2P51531 1590 aa7.16□□□□□ -1.26
PCNX1-214ENST00000556849 GLMNQ92990 594 aa7.16□□□□□ -1.26
PCNX1-214ENST00000556849 SOGA1O94964 1423 aa7.16□□□□□ -1.26
PCNX1-214ENST00000556849 PHF14O94880 888 aa7.15□□□□□ -1.26
PCNX1-214ENST00000556849 METTL3Q86U44 580 aaKnown RBP7.15□□□□□ -1.26
PCNX1-214ENST00000556849 TBC1D2Q9BYX2 928 aa7.15□□□□□ -1.26
PCNX1-214ENST00000556849 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
PCNX1-214ENST00000556849 ABCC8Q09428 1581 aa7.15□□□□□ -1.27
PCNX1-214ENST00000556849 MAPKBP1O60336 1514 aa7.14□□□□□ -1.27
PCNX1-214ENST00000556849 CSB-PGBD3P0DP91 1061 aa7.14□□□□□ -1.27
PCNX1-214ENST00000556849 DDX10Q13206 875 aaKnown RBP7.14□□□□□ -1.27
PCNX1-214ENST00000556849 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
PCNX1-214ENST00000556849 PDCD7Q8N8D1 485 aaKnown RBP7.14□□□□□ -1.27
PCNX1-214ENST00000556849 MTMR14Q8NCE2 650 aa7.14□□□□□ -1.27
PCNX1-214ENST00000556849 TRIM35Q9UPQ4 493 aa7.14□□□□□ -1.27
PCNX1-214ENST00000556849 RNF123Q5XPI4 1314 aa7.13□□□□□ -1.27
PCNX1-214ENST00000556849 MAP3K7O43318 606 aa7.13□□□□□ -1.27
PCNX1-214ENST00000556849 GALR2O43603 387 aaPredicted RBP7.13□□□□□ -1.27
PCNX1-214ENST00000556849 IGSF3O75054 1194 aa7.13□□□□□ -1.27
PCNX1-214ENST00000556849 CERKQ8TCT0 537 aa7.13□□□□□ -1.27
PCNX1-214ENST00000556849 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
PCNX1-214ENST00000556849 ZNF428Q96B54 188 aa7.12□□□□□ -1.27
PCNX1-214ENST00000556849 FAM163AQ96GL9 167 aaPredicted RBP7.12□□□□□ -1.27
PCNX1-214ENST00000556849 CDHR5Q9HBB8 845 aa7.12□□□□□ -1.27
PCNX1-214ENST00000556849 BMP2KQ9NSY1 1161 aaPredicted RBP7.12□□□□□ -1.27
PCNX1-214ENST00000556849 HMGB1P09429 215 aaKnown RBP7.11□□□□□ -1.27
PCNX1-214ENST00000556849 ABL2P42684 1182 aa7.11□□□□□ -1.27
PCNX1-214ENST00000556849 CCDC27Q2M243 656 aa7.11□□□□□ -1.27
PCNX1-214ENST00000556849 RIC3Q7Z5B4 369 aa7.11□□□□□ -1.27
PCNX1-214ENST00000556849 PXYLP1Q8TE99 480 aa7.11□□□□□ -1.27
PCNX1-214ENST00000556849 PTCD2Q8WV60 388 aaKnown RBP7.11□□□□□ -1.27
PCNX1-214ENST00000556849 TOP2AP11388 1531 aaKnown RBP7.11□□□□□ -1.27
PCNX1-214ENST00000556849 RRP9O43818 475 aaKnown RBP7.1□□□□□ -1.27
PCNX1-214ENST00000556849 POTEJP0CG39 1038 aa7.1□□□□□ -1.27
PCNX1-214ENST00000556849 GJA5P36382 358 aa7.1□□□□□ -1.27
PCNX1-214ENST00000556849 OCEL1Q9H607 264 aa7.1□□□□□ -1.27
PCNX1-214ENST00000556849 WDR97A6NE52 1622 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 ZBED9Q6R2W3 1325 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 NEFMP07197 916 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 WASHC4Q2M389 1173 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 RBM27Q9P2N5 1060 aaKnown RBP7.09□□□□□ -1.27
PCNX1-214ENST00000556849 LIMD1Q9UGP4 676 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 WIZO95785 1651 aa7.09□□□□□ -1.27
PCNX1-214ENST00000556849 CCNB3Q8WWL7 1395 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 POM121CA8CG34 1229 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 TCERG1O14776 1098 aaKnown RBP7.08□□□□□ -1.28
PCNX1-214ENST00000556849 SPTLC1O15269 473 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCNX1-214ENST00000556849 IER5LQ5T953 404 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 SND1Q7KZF4 910 aaKnown RBP eCLIP7.08□□□□□ -1.28
PCNX1-214ENST00000556849 SLAIN1Q8ND83 568 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 L3MBTL3Q96JM7 780 aaPredicted RBP7.08□□□□□ -1.28
PCNX1-214ENST00000556849 CECR2Q9BXF3 1484 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 SCRIBQ14160 1630 aa7.08□□□□□ -1.28
PCNX1-214ENST00000556849 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 IRX5P78411 483 aaPredicted RBP7.07□□□□□ -1.28
PCNX1-214ENST00000556849 TYW1BQ6NUM6 668 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 CDAN1Q8IWY9 1227 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 TBC1D2BQ9UPU7 963 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 ADGRG1Q9Y653 693 aa7.07□□□□□ -1.28
PCNX1-214ENST00000556849 SMG6Q86US8 1419 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms