RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 DDX12PQ92771 950 aa9.59□□□□□ -0.87
FCF1-208ENST00000556814 EPAS1Q99814 870 aa9.59□□□□□ -0.87
FCF1-208ENST00000556814 RNF223E7ERA6 249 aa9.58□□□□□ -0.88
FCF1-208ENST00000556814 FAM187AA6NFU0 413 aa9.57□□□□□ -0.88
FCF1-208ENST00000556814 TNFRSF10AO00220 468 aa9.57□□□□□ -0.88
FCF1-208ENST00000556814 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
FCF1-208ENST00000556814 WFS1O76024 890 aa9.56□□□□□ -0.88
FCF1-208ENST00000556814 LIAT1Q6ZQX7 453 aa9.56□□□□□ -0.88
FCF1-208ENST00000556814 PPEF1O14829 653 aaPredicted RBP9.55□□□□□ -0.88
FCF1-208ENST00000556814 OSBPP22059 807 aa9.55□□□□□ -0.88
FCF1-208ENST00000556814 NFX1Q12986 1120 aaKnown RBP9.55□□□□□ -0.88
FCF1-208ENST00000556814 STK17AQ9UEE5 414 aa9.55□□□□□ -0.88
FCF1-208ENST00000556814 GDF9O60383 454 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 PRR20EP86478 221 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 PRR20CP86479 221 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 PRR20DP86480 221 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 PRR20BP86481 221 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 PRR20AP86496 221 aa9.54□□□□□ -0.88
FCF1-208ENST00000556814 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
FCF1-208ENST00000556814 RNF40O75150 1001 aa9.53□□□□□ -0.88
FCF1-208ENST00000556814 PRIM1P49642 420 aaKnown RBP9.53□□□□□ -0.88
FCF1-208ENST00000556814 ZNF598Q86UK7 904 aaKnown RBP9.53□□□□□ -0.88
FCF1-208ENST00000556814 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
FCF1-208ENST00000556814 CDCA7LQ96GN5 454 aa9.53□□□□□ -0.88
FCF1-208ENST00000556814 TMUB1Q9BVT8 246 aa9.53□□□□□ -0.88
FCF1-208ENST00000556814 ZPR1O75312 459 aa9.51□□□□□ -0.89
FCF1-208ENST00000556814 TATDN2Q93075 761 aa9.51□□□□□ -0.89
FCF1-208ENST00000556814 GGCXP38435 758 aa9.5□□□□□ -0.89
FCF1-208ENST00000556814 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
FCF1-208ENST00000556814 ZC3H15Q8WU90 426 aaKnown RBP9.5□□□□□ -0.89
FCF1-208ENST00000556814 NUTM2FA1L443 756 aa9.49□□□□□ -0.89
FCF1-208ENST00000556814 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
FCF1-208ENST00000556814 PRSS12P56730 875 aa9.49□□□□□ -0.89
FCF1-208ENST00000556814 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
FCF1-208ENST00000556814 GMPR2Q9P2T1 348 aaKnown RBP9.49□□□□□ -0.89
FCF1-208ENST00000556814 PNMA3Q9UL41 463 aa9.49□□□□□ -0.89
FCF1-208ENST00000556814 MAP3K7O43318 606 aa9.48□□□□□ -0.89
FCF1-208ENST00000556814 WIPF1O43516 503 aa9.48□□□□□ -0.89
FCF1-208ENST00000556814 TLL1O43897 1013 aa9.47□□□□□ -0.89
FCF1-208ENST00000556814 FCHSD2O94868 740 aa9.46□□□□□ -0.9
FCF1-208ENST00000556814 PLA2G2CQ5R387 149 aa9.45□□□□□ -0.9
FCF1-208ENST00000556814 NUDT18Q6ZVK8 323 aa9.45□□□□□ -0.9
FCF1-208ENST00000556814 ZMYND10O75800 440 aa9.44□□□□□ -0.9
FCF1-208ENST00000556814 CERKQ8TCT0 537 aa9.43□□□□□ -0.9
FCF1-208ENST00000556814 HIC1Q14526 733 aa9.42□□□□□ -0.9
FCF1-208ENST00000556814 SWT1Q5T5J6 900 aaKnown RBP9.42□□□□□ -0.9
FCF1-208ENST00000556814 BLOC1S3Q6QNY0 202 aa9.42□□□□□ -0.9
FCF1-208ENST00000556814 PKD2L1Q9P0L9 805 aa9.42□□□□□ -0.9
FCF1-208ENST00000556814 S1PR4O95977 384 aa9.41□□□□□ -0.9
FCF1-208ENST00000556814 PTGDRQ13258 359 aa9.41□□□□□ -0.9
FCF1-208ENST00000556814 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
FCF1-208ENST00000556814 C11orf95C9JLR9 678 aaPredicted RBP9.4□□□□□ -0.9
FCF1-208ENST00000556814 GPR37O15354 613 aa9.4□□□□□ -0.9
FCF1-208ENST00000556814 GNPATO15228 680 aa9.39□□□□□ -0.91
FCF1-208ENST00000556814 INSM1Q01101 510 aaPredicted RBP9.39□□□□□ -0.91
FCF1-208ENST00000556814 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
FCF1-208ENST00000556814 ANKLE1Q8NAG6 615 aa9.39□□□□□ -0.91
FCF1-208ENST00000556814 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
FCF1-208ENST00000556814 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
FCF1-208ENST00000556814 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
FCF1-208ENST00000556814 FOXC1Q12948 553 aa9.36□□□□□ -0.91
FCF1-208ENST00000556814 SUZ12Q15022 739 aaKnown RBP9.36□□□□□ -0.91
FCF1-208ENST00000556814 CRIPAKQ8N1N5 446 aa9.36□□□□□ -0.91
FCF1-208ENST00000556814 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
FCF1-208ENST00000556814 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
FCF1-208ENST00000556814 RBM27Q9P2N5 1060 aaKnown RBP9.35□□□□□ -0.91
FCF1-208ENST00000556814 PCDHB3Q9Y5E6 796 aa9.35□□□□□ -0.91
FCF1-208ENST00000556814 SNRPBP14678 240 aaKnown RBP9.34□□□□□ -0.91
FCF1-208ENST00000556814 MAP2K5Q13163 448 aa9.34□□□□□ -0.91
FCF1-208ENST00000556814 AK7Q96M32 723 aa9.33□□□□□ -0.92
FCF1-208ENST00000556814 SLC24A3Q9HC58 644 aa9.33□□□□□ -0.92
FCF1-208ENST00000556814 AVPP01185 164 aa9.32□□□□□ -0.92
FCF1-208ENST00000556814 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
FCF1-208ENST00000556814 TERTO14746 1132 aaKnown RBP9.3□□□□□ -0.92
FCF1-208ENST00000556814 IRF6O14896 467 aa9.3□□□□□ -0.92
FCF1-208ENST00000556814 TOR4AQ9NXH8 423 aa9.3□□□□□ -0.92
FCF1-208ENST00000556814 AXIN1O15169 862 aa9.29□□□□□ -0.92
FCF1-208ENST00000556814 FECHP22830 423 aa9.29□□□□□ -0.92
FCF1-208ENST00000556814 PADI6Q6TGC4 694 aa9.28□□□□□ -0.92
FCF1-208ENST00000556814 SLF2Q8IX21 1173 aa9.28□□□□□ -0.92
FCF1-208ENST00000556814 TTC13Q8NBP0 860 aa9.28□□□□□ -0.92
FCF1-208ENST00000556814 OATP04181 439 aa9.27□□□□□ -0.93
FCF1-208ENST00000556814 CCDC102AQ96A19 550 aa9.27□□□□□ -0.93
FCF1-208ENST00000556814 TRIM66O15016 1216 aa9.24□□□□□ -0.93
FCF1-208ENST00000556814 EYA1Q99502 592 aa9.24□□□□□ -0.93
FCF1-208ENST00000556814 RBM46Q8TBY0 533 aaKnown RBP9.23□□□□□ -0.93
FCF1-208ENST00000556814 ADGRG1Q9Y653 693 aa9.23□□□□□ -0.93
FCF1-208ENST00000556814 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
FCF1-208ENST00000556814 AMHR2Q16671 573 aa9.2□□□□□ -0.94
FCF1-208ENST00000556814 METTL3Q86U44 580 aaKnown RBP9.2□□□□□ -0.94
FCF1-208ENST00000556814 ADH1BP00325 375 aa9.19□□□□□ -0.94
FCF1-208ENST00000556814 PDE4DQ08499 809 aa9.19□□□□□ -0.94
FCF1-208ENST00000556814 NEUROD2Q15784 382 aa9.19□□□□□ -0.94
FCF1-208ENST00000556814 PXYLP1Q8TE99 480 aa9.19□□□□□ -0.94
FCF1-208ENST00000556814 ATP13A2Q9NQ11 1180 aa9.19□□□□□ -0.94
FCF1-208ENST00000556814 GMPRP36959 345 aa9.18□□□□□ -0.94
FCF1-208ENST00000556814 NECTIN2Q92692 538 aa9.18□□□□□ -0.94
FCF1-208ENST00000556814 SLC6A16Q9GZN6 736 aa9.18□□□□□ -0.94
FCF1-208ENST00000556814 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
FCF1-208ENST00000556814 FAM161AQ3B820 660 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms