RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CEP152O94986 1710 aa11.89□□□□□ -0.51
HNRNPC-226ENST00000556628 ERBINQ96RT1 1412 aa11.88□□□□□ -0.51
HNRNPC-226ENST00000556628 ABCC3O15438 1527 aa11.88□□□□□ -0.51
HNRNPC-226ENST00000556628 ANKRD30AQ9BXX3 1397 aa11.88□□□□□ -0.51
HNRNPC-226ENST00000556628 NLRP1Q9C000 1473 aa11.88□□□□□ -0.51
HNRNPC-226ENST00000556628 POLR1AO95602 1720 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-226ENST00000556628 FAM50AQ14320 339 aaKnown RBP11.87□□□□□ -0.51
HNRNPC-226ENST00000556628 THEMISQ8N1K5 641 aaPredicted RBP11.87□□□□□ -0.51
HNRNPC-226ENST00000556628 CHIC2Q9UKJ5 165 aa11.87□□□□□ -0.51
HNRNPC-226ENST00000556628 KANK1Q14678 1352 aa11.86□□□□□ -0.51
HNRNPC-226ENST00000556628 UGGT1Q9NYU2 1555 aa11.86□□□□□ -0.51
HNRNPC-226ENST00000556628 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
HNRNPC-226ENST00000556628 MROH1Q8NDA8 1641 aa11.86□□□□□ -0.51
HNRNPC-226ENST00000556628 PRDM15P57071 1507 aaPredicted RBP11.85□□□□□ -0.51
HNRNPC-226ENST00000556628 SPATA31D1Q6ZQQ2 1576 aa11.84□□□□□ -0.51
HNRNPC-226ENST00000556628 ANKLE2Q86XL3 938 aa11.84□□□□□ -0.51
HNRNPC-226ENST00000556628 LTBP4Q8N2S1 1624 aa11.84□□□□□ -0.51
HNRNPC-226ENST00000556628 ERVK-7P63135 1459 aa11.83□□□□□ -0.52
HNRNPC-226ENST00000556628 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
HNRNPC-226ENST00000556628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.83□□□□□ -0.522e-10■□□□□ 8.9
HNRNPC-226ENST00000556628 GALR2O43603 387 aaPredicted RBP11.83□□□□□ -0.52
HNRNPC-226ENST00000556628 DEPDC5O75140 1603 aa11.82□□□□□ -0.52
HNRNPC-226ENST00000556628 ZNF335Q9H4Z2 1342 aaPredicted RBP11.82□□□□□ -0.52
HNRNPC-226ENST00000556628 ARHGAP31Q2M1Z3 1444 aa11.81□□□□□ -0.52
HNRNPC-226ENST00000556628 ADGRL2O95490 1459 aa11.81□□□□□ -0.52
HNRNPC-226ENST00000556628 MNX1P50219 401 aaPredicted RBP11.8□□□□□ -0.52
HNRNPC-226ENST00000556628 NEURL4Q96JN8 1562 aa11.79□□□□□ -0.52
HNRNPC-226ENST00000556628 PHF12Q96QT6 1004 aa11.79□□□□□ -0.52
HNRNPC-226ENST00000556628 UBR1Q8IWV7 1749 aa11.78□□□□□ -0.52
HNRNPC-226ENST00000556628 NPHP4O75161 1426 aaPredicted RBP11.77□□□□□ -0.52
HNRNPC-226ENST00000556628 LMTK2Q8IWU2 1503 aa11.77□□□□□ -0.52
HNRNPC-226ENST00000556628 IQGAP1P46940 1657 aa11.77□□□□□ -0.53
HNRNPC-226ENST00000556628 ANKRD50Q9ULJ7 1429 aa11.77□□□□□ -0.53
HNRNPC-226ENST00000556628 MED14O60244 1454 aa11.76□□□□□ -0.53
HNRNPC-226ENST00000556628 CPS1P31327 1500 aa11.76□□□□□ -0.53
HNRNPC-226ENST00000556628 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
HNRNPC-226ENST00000556628 UBAP1LF5GYI3 381 aa11.75□□□□□ -0.53
HNRNPC-226ENST00000556628 EID1Q9Y6B2 187 aa11.75□□□□□ -0.53
HNRNPC-226ENST00000556628 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
HNRNPC-226ENST00000556628 PIK3C2BO00750 1634 aa11.75□□□□□ -0.53
HNRNPC-226ENST00000556628 PPARGC1BQ86YN6 1023 aaKnown RBP11.74□□□□□ -0.53
HNRNPC-226ENST00000556628 ITGAEP38570 1179 aa11.73□□□□□ -0.53
HNRNPC-226ENST00000556628 TXNDC2Q86VQ3 553 aa11.73□□□□□ -0.53
HNRNPC-226ENST00000556628 PROM2Q8N271 834 aa11.73□□□□□ -0.53
HNRNPC-226ENST00000556628 SCAF11Q99590 1463 aaKnown RBP11.73□□□□□ -0.53
HNRNPC-226ENST00000556628 KDM5AP29375 1690 aaKnown RBP11.72□□□□□ -0.53
HNRNPC-226ENST00000556628 ROCK1Q13464 1354 aa11.72□□□□□ -0.53
HNRNPC-226ENST00000556628 TET3O43151 1660 aa11.71□□□□□ -0.53
HNRNPC-226ENST00000556628 GCC2Q8IWJ2 1684 aa11.71□□□□□ -0.53
HNRNPC-226ENST00000556628 UNC13BO14795 1591 aa11.71□□□□□ -0.53
HNRNPC-226ENST00000556628 SLIT1O75093 1534 aa11.71□□□□□ -0.53
HNRNPC-226ENST00000556628 RPRD2Q5VT52 1461 aaKnown RBP11.71□□□□□ -0.53
HNRNPC-226ENST00000556628 ARHGAP23Q9P227 1491 aa11.7□□□□□ -0.54
HNRNPC-226ENST00000556628 TOM1O60784 492 aa11.7□□□□□ -0.54
HNRNPC-226ENST00000556628 IDI1Q13907 227 aa11.7□□□□□ -0.54
HNRNPC-226ENST00000556628 SLC52A1Q9NWF4 448 aa11.7□□□□□ -0.54
HNRNPC-226ENST00000556628 SYNMO15061 1565 aa11.7□□□□□ -0.54
HNRNPC-226ENST00000556628 NOS1P29475 1434 aa11.69□□□□□ -0.54
HNRNPC-226ENST00000556628 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
HNRNPC-226ENST00000556628 LTKP29376 864 aa11.68□□□□□ -0.54
HNRNPC-226ENST00000556628 ADGRB3O60242 1522 aa11.68□□□□□ -0.54
HNRNPC-226ENST00000556628 PIP4K2BP78356 416 aa11.67□□□□□ -0.54
HNRNPC-226ENST00000556628 IQGAP3Q86VI3 1631 aa11.67□□□□□ -0.54
HNRNPC-226ENST00000556628 HDGFP51858 240 aaKnown RBP11.66□□□□□ -0.54
HNRNPC-226ENST00000556628 BCANQ96GW7 911 aa11.66□□□□□ -0.54
HNRNPC-226ENST00000556628 STRCP1A6NGW2 1772 aa11.66□□□□□ -0.54
HNRNPC-226ENST00000556628 NUP155O75694 1391 aa11.66□□□□□ -0.54
HNRNPC-226ENST00000556628 E9PCH4 1651 aa11.65□□□□□ -0.54
HNRNPC-226ENST00000556628 DISP3Q9P2K9 1392 aa11.65□□□□□ -0.55
HNRNPC-226ENST00000556628 PPP1R15AO75807 674 aaPredicted RBP11.64□□□□□ -0.55
HNRNPC-226ENST00000556628 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
HNRNPC-226ENST00000556628 MYO5BQ9ULV0 1848 aa11.64□□□□□ -0.55
HNRNPC-226ENST00000556628 LRRC7Q96NW7 1537 aa11.64□□□□□ -0.55
HNRNPC-226ENST00000556628 RRBP1Q9P2E9 1410 aaKnown RBP11.63□□□□□ -0.55
HNRNPC-226ENST00000556628 MS4A3Q96HJ5 214 aa11.62□□□□□ -0.55
HNRNPC-226ENST00000556628 TMEM131LA2VDJ0 1609 aa11.61□□□□□ -0.55
HNRNPC-226ENST00000556628 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
HNRNPC-226ENST00000556628 SLC26A8Q96RN1 970 aa11.61□□□□□ -0.55
HNRNPC-226ENST00000556628 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
HNRNPC-226ENST00000556628 RIMS2Q9UQ26 1411 aa11.6□□□□□ -0.55
HNRNPC-226ENST00000556628 PELP1Q8IZL8 1130 aaKnown RBP11.6□□□□□ -0.55
HNRNPC-226ENST00000556628 OTUD5Q96G74 571 aa11.6□□□□□ -0.55
HNRNPC-226ENST00000556628 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
HNRNPC-226ENST00000556628 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
HNRNPC-226ENST00000556628 KCNA6P17658 529 aa11.59□□□□□ -0.55
HNRNPC-226ENST00000556628 ASTLQ6HA08 431 aaPredicted RBP11.59□□□□□ -0.55
HNRNPC-226ENST00000556628 SPHKAPQ2M3C7 1700 aa11.59□□□□□ -0.55
HNRNPC-226ENST00000556628 XIRP1Q702N8 1843 aaKnown RBP11.58□□□□□ -0.56
HNRNPC-226ENST00000556628 PLEKHG1Q9ULL1 1385 aa11.58□□□□□ -0.56
HNRNPC-226ENST00000556628 HSPA1LP34931 641 aa11.58□□□□□ -0.56
HNRNPC-226ENST00000556628 PROSER2Q86WR7 435 aaPredicted RBP11.58□□□□□ -0.56
HNRNPC-226ENST00000556628 ZFYVE9O95405 1425 aa11.58□□□□□ -0.56
HNRNPC-226ENST00000556628 NAIPQ13075 1403 aa11.57□□□□□ -0.56
HNRNPC-226ENST00000556628 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 TRIM52Q96A61 297 aa11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 CCDC61Q9Y6R9 512 aa11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 NKTRP30414 1462 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 CHD2O14647 1828 aaKnown RBP11.56□□□□□ -0.56
HNRNPC-226ENST00000556628 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms