RNA–Protein interactions for RNA: ENST00000556371.1

ITGA7-216, Transcript of integrin subunit alpha 7, humanhuman

TSL 4

Gene ITGA7, Length 493 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-216ENST00000556371 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
ITGA7-216ENST00000556371 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
ITGA7-216ENST00000556371 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
ITGA7-216ENST00000556371 NRXN1Q9ULB1 1477 aa13.86□□□□□ -0.19
ITGA7-216ENST00000556371 IFT172Q9UG01 1749 aa13.85□□□□□ -0.19
ITGA7-216ENST00000556371 SPATA31D1Q6ZQQ2 1576 aa13.85□□□□□ -0.19
ITGA7-216ENST00000556371 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
ITGA7-216ENST00000556371 C14orf93Q9H972 538 aaKnown RBP13.85□□□□□ -0.19
ITGA7-216ENST00000556371 STAG3Q9UJ98 1225 aa13.85□□□□□ -0.19
ITGA7-216ENST00000556371 LAMC1P11047 1609 aa13.85□□□□□ -0.19
ITGA7-216ENST00000556371 CEBPAP49715 358 aaPredicted RBP13.84□□□□□ -0.19
ITGA7-216ENST00000556371 TMEM131LA2VDJ0 1609 aa13.83□□□□□ -0.2
ITGA7-216ENST00000556371 PPLO60437 1756 aa13.82□□□□□ -0.2
ITGA7-216ENST00000556371 TESK2Q96S53 571 aa13.82□□□□□ -0.2
ITGA7-216ENST00000556371 TNRQ92752 1358 aa13.82□□□□□ -0.2
ITGA7-216ENST00000556371 ZFYVE9O95405 1425 aa13.81□□□□□ -0.2
ITGA7-216ENST00000556371 KIAA1210Q9ULL0 1709 aa13.81□□□□□ -0.2
ITGA7-216ENST00000556371 NEXMIFQ5QGS0 1516 aa13.81□□□□□ -0.2
ITGA7-216ENST00000556371 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
ITGA7-216ENST00000556371 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
ITGA7-216ENST00000556371 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
ITGA7-216ENST00000556371 A2ML1A8K2U0 1454 aa13.8□□□□□ -0.2
ITGA7-216ENST00000556371 ANP32CO43423 234 aa13.78□□□□□ -0.2
ITGA7-216ENST00000556371 TMEM132EQ6IEE7 984 aa13.78□□□□□ -0.2
ITGA7-216ENST00000556371 PLPPR3Q6T4P5 718 aa13.77□□□□□ -0.21
ITGA7-216ENST00000556371 MYO5BQ9ULV0 1848 aa13.77□□□□□ -0.21
ITGA7-216ENST00000556371 IQGAP1P46940 1657 aa13.76□□□□□ -0.21
ITGA7-216ENST00000556371 RIMS2Q9UQ26 1411 aa13.76□□□□□ -0.21
ITGA7-216ENST00000556371 TMF1P82094 1093 aa13.76□□□□□ -0.21
ITGA7-216ENST00000556371 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
ITGA7-216ENST00000556371 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
ITGA7-216ENST00000556371 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
ITGA7-216ENST00000556371 POLR1AO95602 1720 aaPredicted RBP13.75□□□□□ -0.21
ITGA7-216ENST00000556371 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
ITGA7-216ENST00000556371 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
ITGA7-216ENST00000556371 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
ITGA7-216ENST00000556371 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
ITGA7-216ENST00000556371 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
ITGA7-216ENST00000556371 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
ITGA7-216ENST00000556371 C3P01024 1663 aa13.72□□□□□ -0.21
ITGA7-216ENST00000556371 SLC24A1O60721 1099 aa13.72□□□□□ -0.21
ITGA7-216ENST00000556371 NLRP1Q9C000 1473 aa13.72□□□□□ -0.21
ITGA7-216ENST00000556371 CENPJQ9HC77 1338 aaPredicted RBP13.7□□□□□ -0.22
ITGA7-216ENST00000556371 CCER2I3L3R5 266 aa13.7□□□□□ -0.22
ITGA7-216ENST00000556371 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
ITGA7-216ENST00000556371 STK26Q9P289 416 aa13.7□□□□□ -0.22
ITGA7-216ENST00000556371 TMEM2Q9UHN6 1383 aa13.7□□□□□ -0.22
ITGA7-216ENST00000556371 THEMISQ8N1K5 641 aaPredicted RBP13.68□□□□□ -0.22
ITGA7-216ENST00000556371 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
ITGA7-216ENST00000556371 UBR1Q8IWV7 1749 aa13.67□□□□□ -0.22
ITGA7-216ENST00000556371 KDM5AP29375 1690 aaKnown RBP13.67□□□□□ -0.22
ITGA7-216ENST00000556371 ADAMTSL3P82987 1691 aa13.67□□□□□ -0.22
ITGA7-216ENST00000556371 LTKP29376 864 aa13.67□□□□□ -0.22
ITGA7-216ENST00000556371 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
ITGA7-216ENST00000556371 PRKRIP1Q9H875 184 aaPredicted RBP13.67□□□□□ -0.22
ITGA7-216ENST00000556371 ASXL1Q8IXJ9 1541 aa13.66□□□□□ -0.22
ITGA7-216ENST00000556371 BCANQ96GW7 911 aa13.66□□□□□ -0.22
ITGA7-216ENST00000556371 YTHDC1Q96MU7 727 aaKnown RBP13.66□□□□□ -0.22
ITGA7-216ENST00000556371 RIMS1Q86UR5 1692 aaKnown RBP13.66□□□□□ -0.22
ITGA7-216ENST00000556371 YTHDC2Q9H6S0 1430 aaKnown RBP13.65□□□□□ -0.22
ITGA7-216ENST00000556371 PANK3Q9H999 370 aa13.65□□□□□ -0.22
ITGA7-216ENST00000556371 EID1Q9Y6B2 187 aa13.65□□□□□ -0.22
ITGA7-216ENST00000556371 SBNO2Q9Y2G9 1366 aa13.65□□□□□ -0.22
ITGA7-216ENST00000556371 PTPRMP28827 1452 aa13.64□□□□□ -0.23
ITGA7-216ENST00000556371 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
ITGA7-216ENST00000556371 MYO3AQ8NEV4 1616 aa13.64□□□□□ -0.23
ITGA7-216ENST00000556371 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
ITGA7-216ENST00000556371 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
ITGA7-216ENST00000556371 SAFB2Q14151 953 aaKnown RBP eCLIP13.62□□□□□ -0.23
ITGA7-216ENST00000556371 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
ITGA7-216ENST00000556371 POGKQ9P215 609 aa13.62□□□□□ -0.23
ITGA7-216ENST00000556371 ARHGAP23Q9P227 1491 aa13.61□□□□□ -0.23
ITGA7-216ENST00000556371 METP08581 1390 aa13.61□□□□□ -0.23
ITGA7-216ENST00000556371 PLEKHG1Q9ULL1 1385 aa13.61□□□□□ -0.23
ITGA7-216ENST00000556371 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
ITGA7-216ENST00000556371 SLIT1O75093 1534 aa13.6□□□□□ -0.23
ITGA7-216ENST00000556371 PUS7Q96PZ0 661 aaKnown RBP13.6□□□□□ -0.23
ITGA7-216ENST00000556371 NRXN3Q9Y4C0 1643 aa13.6□□□□□ -0.23
ITGA7-216ENST00000556371 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
ITGA7-216ENST00000556371 CCDC184Q52MB2 194 aa13.59□□□□□ -0.23
ITGA7-216ENST00000556371 WAPLQ7Z5K2 1190 aa13.59□□□□□ -0.23
ITGA7-216ENST00000556371 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
ITGA7-216ENST00000556371 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
ITGA7-216ENST00000556371 ADAMTS13Q76LX8 1427 aa13.58□□□□□ -0.24
ITGA7-216ENST00000556371 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
ITGA7-216ENST00000556371 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
ITGA7-216ENST00000556371 SETD1AO15047 1707 aaKnown RBP13.58□□□□□ -0.24
ITGA7-216ENST00000556371 MINK1Q8N4C8 1332 aaPredicted RBP13.58□□□□□ -0.24
ITGA7-216ENST00000556371 RALBP1Q15311 655 aa13.57□□□□□ -0.24
ITGA7-216ENST00000556371 TBX22Q9Y458 520 aa13.57□□□□□ -0.24
ITGA7-216ENST00000556371 CEP170BQ9Y4F5 1589 aaPredicted RBP13.57□□□□□ -0.24
ITGA7-216ENST00000556371 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
ITGA7-216ENST00000556371 CENPBP07199 599 aaPredicted RBP13.56□□□□□ -0.24
ITGA7-216ENST00000556371 CABP2Q9NPB3 220 aa13.56□□□□□ -0.24
ITGA7-216ENST00000556371 KNSTRNQ9Y448 316 aa13.56□□□□□ -0.24
ITGA7-216ENST00000556371 MED14O60244 1454 aa13.55□□□□□ -0.24
ITGA7-216ENST00000556371 ANKLE2Q86XL3 938 aa13.55□□□□□ -0.24
ITGA7-216ENST00000556371 TMC1Q8TDI8 760 aa13.55□□□□□ -0.24
ITGA7-216ENST00000556371 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
ITGA7-216ENST00000556371 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms