RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.73□□□□□ -0.69
ATXN3-233ENST00000555816 TMUB1Q9BVT8 246 aa10.73□□□□□ -0.69
ATXN3-233ENST00000555816 PPP1R18Q6NYC8 613 aa10.72□□□□□ -0.69
ATXN3-233ENST00000555816 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.72□□□□□ -0.69
ATXN3-233ENST00000555816 V9GY48 417 aaPredicted RBP10.72□□□□□ -0.69
ATXN3-233ENST00000555816 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
ATXN3-233ENST00000555816 ZNF516Q92618 1163 aa10.71□□□□□ -0.69
ATXN3-233ENST00000555816 ZPR1O75312 459 aa10.7□□□□□ -0.7
ATXN3-233ENST00000555816 KMT5BQ4FZB7 885 aa10.7□□□□□ -0.7
ATXN3-233ENST00000555816 RSPH4AQ5TD94 716 aa10.7□□□□□ -0.7
ATXN3-233ENST00000555816 PCDHB3Q9Y5E6 796 aa10.7□□□□□ -0.7
ATXN3-233ENST00000555816 PXYLP1Q8TE99 480 aa10.68□□□□□ -0.7
ATXN3-233ENST00000555816 ACTN4O43707 911 aaKnown RBP10.67□□□□□ -0.7
ATXN3-233ENST00000555816 COPS2P61201 443 aa10.66□□□□□ -0.7
ATXN3-233ENST00000555816 PRKD2Q9BZL6 878 aa10.66□□□□□ -0.7
ATXN3-233ENST00000555816 GNPATO15228 680 aa10.64□□□□□ -0.71
ATXN3-233ENST00000555816 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
ATXN3-233ENST00000555816 METTL3Q86U44 580 aaKnown RBP10.63□□□□□ -0.71
ATXN3-233ENST00000555816 NKX2-3Q8TAU0 364 aa10.63□□□□□ -0.71
ATXN3-233ENST00000555816 HAP1P54257 671 aaPredicted RBP10.62□□□□□ -0.71
ATXN3-233ENST00000555816 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
ATXN3-233ENST00000555816 Q6ZNB5 142 aa10.62□□□□□ -0.71
ATXN3-233ENST00000555816 NR1I2O75469 434 aa10.61□□□□□ -0.71
ATXN3-233ENST00000555816 CFHP08603 1231 aa10.61□□□□□ -0.71
ATXN3-233ENST00000555816 BLOC1S3Q6QNY0 202 aa10.61□□□□□ -0.71
ATXN3-233ENST00000555816 GFRA3O60609 400 aa10.6□□□□□ -0.71
ATXN3-233ENST00000555816 SLC10A3P09131 477 aa10.59□□□□□ -0.71
ATXN3-233ENST00000555816 DAXXQ9UER7 740 aaPredicted RBP10.59□□□□□ -0.71
ATXN3-233ENST00000555816 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
ATXN3-233ENST00000555816 VSIG10Q8N0Z9 540 aa10.58□□□□□ -0.72
ATXN3-233ENST00000555816 NRG2O14511 850 aaPredicted RBP10.57□□□□□ -0.72
ATXN3-233ENST00000555816 GPR37O15354 613 aa10.56□□□□□ -0.72
ATXN3-233ENST00000555816 TULP1O00294 542 aaPredicted RBP10.55□□□□□ -0.72
ATXN3-233ENST00000555816 ANKLE1Q8NAG6 615 aa10.55□□□□□ -0.72
ATXN3-233ENST00000555816 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
ATXN3-233ENST00000555816 SULF1Q8IWU6 871 aa10.54□□□□□ -0.72
ATXN3-233ENST00000555816 RNF223E7ERA6 249 aa10.53□□□□□ -0.72
ATXN3-233ENST00000555816 ADH1BP00325 375 aa10.53□□□□□ -0.72
ATXN3-233ENST00000555816 GPIHBP1Q8IV16 184 aa10.53□□□□□ -0.72
ATXN3-233ENST00000555816 FECHP22830 423 aa10.52□□□□□ -0.73
ATXN3-233ENST00000555816 SCUBE3Q8IX30 993 aa10.52□□□□□ -0.73
ATXN3-233ENST00000555816 TRAF7Q6Q0C0 670 aa10.51□□□□□ -0.73
ATXN3-233ENST00000555816 SLC19A1P41440 591 aa10.5□□□□□ -0.73
ATXN3-233ENST00000555816 PDZRN3Q9UPQ7 1066 aa10.5□□□□□ -0.73
ATXN3-233ENST00000555816 RDH13Q8NBN7 331 aa10.48□□□□□ -0.73
ATXN3-233ENST00000555816 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
ATXN3-233ENST00000555816 NACADO15069 1562 aa10.48□□□□□ -0.73
ATXN3-233ENST00000555816 TLL1O43897 1013 aa10.47□□□□□ -0.73
ATXN3-233ENST00000555816 S1PR4O95977 384 aa10.47□□□□□ -0.73
ATXN3-233ENST00000555816 ATP6V1AP38606 617 aa10.47□□□□□ -0.73
ATXN3-233ENST00000555816 GCGRP47871 477 aa10.47□□□□□ -0.73
ATXN3-233ENST00000555816 ZNF598Q86UK7 904 aaKnown RBP10.47□□□□□ -0.73
ATXN3-233ENST00000555816 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
ATXN3-233ENST00000555816 GRIPAP1Q4V328 841 aa10.46□□□□□ -0.73
ATXN3-233ENST00000555816 SPRYD7Q5W111 196 aa10.46□□□□□ -0.73
ATXN3-233ENST00000555816 SPSB2Q99619 263 aa10.46□□□□□ -0.73
ATXN3-233ENST00000555816 DDX11L8A8MPP1 907 aa10.45□□□□□ -0.74
ATXN3-233ENST00000555816 PRR20EP86478 221 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 PRR20CP86479 221 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 PRR20DP86480 221 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 PRR20BP86481 221 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 PRR20AP86496 221 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 MORN1Q5T089 497 aa10.44□□□□□ -0.74
ATXN3-233ENST00000555816 MAP2K5Q13163 448 aa10.43□□□□□ -0.74
ATXN3-233ENST00000555816 MINK1Q8N4C8 1332 aaPredicted RBP10.42□□□□□ -0.74
ATXN3-233ENST00000555816 PUS10Q3MIT2 529 aaKnown RBP10.42□□□□□ -0.74
ATXN3-233ENST00000555816 PHOX2BQ99453 314 aa10.42□□□□□ -0.74
ATXN3-233ENST00000555816 FMNL1O95466 1100 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-233ENST00000555816 FUT2Q10981 343 aa10.41□□□□□ -0.74
ATXN3-233ENST00000555816 EMID1Q96A84 441 aaPredicted RBP10.41□□□□□ -0.74
ATXN3-233ENST00000555816 IRF6O14896 467 aa10.4□□□□□ -0.74
ATXN3-233ENST00000555816 LMOD2Q6P5Q4 547 aa10.4□□□□□ -0.74
ATXN3-233ENST00000555816 THAP11Q96EK4 314 aa10.4□□□□□ -0.74
ATXN3-233ENST00000555816 PPEF1O14829 653 aaPredicted RBP10.39□□□□□ -0.75
ATXN3-233ENST00000555816 LIAT1Q6ZQX7 453 aa10.39□□□□□ -0.75
ATXN3-233ENST00000555816 LCE2BO14633 110 aa10.38□□□□□ -0.75
ATXN3-233ENST00000555816 DGAT1O75907 488 aa10.38□□□□□ -0.75
ATXN3-233ENST00000555816 RPIAP49247 311 aa10.38□□□□□ -0.75
ATXN3-233ENST00000555816 TRIM67Q6ZTA4 783 aa10.38□□□□□ -0.75
ATXN3-233ENST00000555816 Q3C1V9 767 aa10.37□□□□□ -0.75
ATXN3-233ENST00000555816 ZNF697Q5TEC3 545 aa10.37□□□□□ -0.75
ATXN3-233ENST00000555816 BRICD5Q6PL45 260 aa10.37□□□□□ -0.75
ATXN3-233ENST00000555816 SLC27A5Q9Y2P5 690 aa10.37□□□□□ -0.75
ATXN3-233ENST00000555816 CD2BP2O95400 341 aaKnown RBP10.36□□□□□ -0.75
ATXN3-233ENST00000555816 CD46P15529 392 aa10.35□□□□□ -0.75
ATXN3-233ENST00000555816 NLRP7Q8WX94 980 aa10.35□□□□□ -0.75
ATXN3-233ENST00000555816 GDF9O60383 454 aa10.34□□□□□ -0.75
ATXN3-233ENST00000555816 USP46P62068 366 aa10.34□□□□□ -0.75
ATXN3-233ENST00000555816 MSS51Q4VC12 460 aa10.34□□□□□ -0.75
ATXN3-233ENST00000555816 PKDCCQ504Y2 493 aa10.33□□□□□ -0.76
ATXN3-233ENST00000555816 FAM160A2Q8N612 972 aaPredicted RBP10.33□□□□□ -0.76
ATXN3-233ENST00000555816 KDM4AO75164 1064 aa10.31□□□□□ -0.76
ATXN3-233ENST00000555816 PLA2G2CQ5R387 149 aa10.31□□□□□ -0.76
ATXN3-233ENST00000555816 CLCN1P35523 988 aa10.3□□□□□ -0.76
ATXN3-233ENST00000555816 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATXN3-233ENST00000555816 FCF1Q9Y324 198 aaKnown RBP10.29□□□□□ -0.76
ATXN3-233ENST00000555816 ZBTB24O43167 697 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-233ENST00000555816 ZNF787Q6DD87 383 aa10.28□□□□□ -0.76
ATXN3-233ENST00000555816 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
ATXN3-233ENST00000555816 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms