RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 ERICH6Q7L0X2 663 aa13.22□□□□□ -0.29
RPGRIP1-208ENST00000555489 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
RPGRIP1-208ENST00000555489 LMTK2Q8IWU2 1503 aa13.22□□□□□ -0.29
RPGRIP1-208ENST00000555489 KIF3BO15066 747 aa13.22□□□□□ -0.29
RPGRIP1-208ENST00000555489 ZNF518AQ6AHZ1 1483 aa13.22□□□□□ -0.29
RPGRIP1-208ENST00000555489 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
RPGRIP1-208ENST00000555489 ASXL1Q8IXJ9 1541 aa13.21□□□□□ -0.29
RPGRIP1-208ENST00000555489 ASXL2Q76L83 1435 aa13.21□□□□□ -0.29
RPGRIP1-208ENST00000555489 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
RPGRIP1-208ENST00000555489 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
RPGRIP1-208ENST00000555489 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
RPGRIP1-208ENST00000555489 SENP3-EIF4A1A0A087X0R7 540 aa13.19□□□□□ -0.3
RPGRIP1-208ENST00000555489 MYT1LQ9UL68 1186 aa13.19□□□□□ -0.3
RPGRIP1-208ENST00000555489 KIF1BO60333 1816 aa13.19□□□□□ -0.3
RPGRIP1-208ENST00000555489 MYOM1P52179 1685 aa13.19□□□□□ -0.3
RPGRIP1-208ENST00000555489 AMER1Q5JTC6 1135 aaPredicted RBP13.19□□□□□ -0.3
RPGRIP1-208ENST00000555489 KIDINS220Q9ULH0 1771 aa13.18□□□□□ -0.3
RPGRIP1-208ENST00000555489 PPP2R1AP30153 589 aa13.18□□□□□ -0.3
RPGRIP1-208ENST00000555489 IFT172Q9UG01 1749 aa13.18□□□□□ -0.3
RPGRIP1-208ENST00000555489 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
RPGRIP1-208ENST00000555489 WDR43Q15061 677 aaKnown RBP eCLIP13.17□□□□□ -0.3
RPGRIP1-208ENST00000555489 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
RPGRIP1-208ENST00000555489 NRXN1Q9ULB1 1477 aa13.17□□□□□ -0.3
RPGRIP1-208ENST00000555489 SBNO2Q9Y2G9 1366 aa13.16□□□□□ -0.3
RPGRIP1-208ENST00000555489 PPRC1Q5VV67 1664 aaKnown RBP13.16□□□□□ -0.3
RPGRIP1-208ENST00000555489 MYO3AQ8NEV4 1616 aa13.16□□□□□ -0.3
RPGRIP1-208ENST00000555489 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
RPGRIP1-208ENST00000555489 EXOC6Q8TAG9 804 aa13.15□□□□□ -0.3
RPGRIP1-208ENST00000555489 CDCA7LQ96GN5 454 aa13.15□□□□□ -0.3
RPGRIP1-208ENST00000555489 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
RPGRIP1-208ENST00000555489 ADGRB3O60242 1522 aa13.14□□□□□ -0.31
RPGRIP1-208ENST00000555489 UGGT1Q9NYU2 1555 aa13.14□□□□□ -0.31
RPGRIP1-208ENST00000555489 NPM1P06748 294 aaKnown RBP eCLIP13.13□□□□□ -0.31
RPGRIP1-208ENST00000555489 ERVK-7P63135 1459 aa13.13□□□□□ -0.31
RPGRIP1-208ENST00000555489 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
RPGRIP1-208ENST00000555489 TCERG1O14776 1098 aaKnown RBP13.13□□□□□ -0.31
RPGRIP1-208ENST00000555489 POGZQ7Z3K3 1410 aa13.13□□□□□ -0.31
RPGRIP1-208ENST00000555489 ANP32AP39687 249 aaKnown RBP13.12□□□□□ -0.31
RPGRIP1-208ENST00000555489 MROH2AA6NES4 1674 aa13.12□□□□□ -0.31
RPGRIP1-208ENST00000555489 CFAP70Q5T0N1 1121 aa13.12□□□□□ -0.31
RPGRIP1-208ENST00000555489 ADGRF5Q8IZF2 1346 aa13.11□□□□□ -0.31
RPGRIP1-208ENST00000555489 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
RPGRIP1-208ENST00000555489 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
RPGRIP1-208ENST00000555489 ZNF521Q96K83 1311 aa13.11□□□□□ -0.31
RPGRIP1-208ENST00000555489 CD109Q6YHK3 1445 aa13.1□□□□□ -0.31
RPGRIP1-208ENST00000555489 MS4A1P11836 297 aa13.1□□□□□ -0.31
RPGRIP1-208ENST00000555489 NOP58Q9Y2X3 529 aaKnown RBP13.1□□□□□ -0.31
RPGRIP1-208ENST00000555489 GOLGA2Q08379 1002 aa13.09□□□□□ -0.31
RPGRIP1-208ENST00000555489 NPATQ14207 1427 aa13.09□□□□□ -0.31
RPGRIP1-208ENST00000555489 PLEKHH1Q9ULM0 1364 aa13.09□□□□□ -0.31
RPGRIP1-208ENST00000555489 RPGRIP1LQ68CZ1 1315 aa13.08□□□□□ -0.32
RPGRIP1-208ENST00000555489 FRMPD1Q5SYB0 1578 aa13.08□□□□□ -0.32
RPGRIP1-208ENST00000555489 NOS1P29475 1434 aa13.08□□□□□ -0.32
RPGRIP1-208ENST00000555489 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 IPO9Q96P70 1041 aaKnown RBP13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 PPLO60437 1756 aa13.07□□□□□ -0.32
RPGRIP1-208ENST00000555489 NEO1Q92859 1461 aa13.05□□□□□ -0.32
RPGRIP1-208ENST00000555489 OSCARQ8IYS5 282 aa13.05□□□□□ -0.32
RPGRIP1-208ENST00000555489 ABCC3O15438 1527 aa13.05□□□□□ -0.32
RPGRIP1-208ENST00000555489 CRBNQ96SW2 442 aa13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 C14orf93Q9H972 538 aaKnown RBP13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 ADGRB1O14514 1584 aa13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 POLR3AO14802 1390 aaPredicted RBP13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 ZC3H13Q5T200 1668 aaKnown RBP13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 PLIN1O60240 522 aa13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
RPGRIP1-208ENST00000555489 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
RPGRIP1-208ENST00000555489 TRMT2AQ8IZ69 625 aaKnown RBP13.03□□□□□ -0.32
RPGRIP1-208ENST00000555489 CARD14Q9BXL6 1004 aa13.03□□□□□ -0.32
RPGRIP1-208ENST00000555489 QRICH2Q9H0J4 1663 aa13.03□□□□□ -0.32
RPGRIP1-208ENST00000555489 NKTRP30414 1462 aaKnown RBP13.02□□□□□ -0.32
RPGRIP1-208ENST00000555489 USP32Q8NFA0 1604 aa13.02□□□□□ -0.32
RPGRIP1-208ENST00000555489 PUS7Q96PZ0 661 aaKnown RBP13.02□□□□□ -0.33
RPGRIP1-208ENST00000555489 E9PSI1 815 aa13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 GGT6Q6P531 493 aa13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 PIK3C2BO00750 1634 aa13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 PDE4AP27815 886 aa13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 BACH2Q9BYV9 841 aa13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 ZBTB47Q9UFB7 747 aaPredicted RBP13.01□□□□□ -0.33
RPGRIP1-208ENST00000555489 ARHGAP31Q2M1Z3 1444 aa13□□□□□ -0.33
RPGRIP1-208ENST00000555489 CENPQQ7L2Z9 268 aaPredicted RBP13□□□□□ -0.33
RPGRIP1-208ENST00000555489 NSD3Q9BZ95 1437 aa13□□□□□ -0.33
RPGRIP1-208ENST00000555489 APAF1O14727 1248 aa12.99□□□□□ -0.33
RPGRIP1-208ENST00000555489 KDM2BQ8NHM5 1336 aa12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 VGFO15240 615 aaPredicted RBP12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 GLI2P10070 1586 aa12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 DIP2CQ9Y2E4 1556 aa12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 CCDC146Q8IYE0 955 aa12.98□□□□□ -0.33
RPGRIP1-208ENST00000555489 NINLQ9Y2I6 1382 aa12.97□□□□□ -0.33
RPGRIP1-208ENST00000555489 C20orf194Q5TEA3 1177 aa12.97□□□□□ -0.33
RPGRIP1-208ENST00000555489 NSD2O96028 1365 aa12.97□□□□□ -0.33
RPGRIP1-208ENST00000555489 NEXMIFQ5QGS0 1516 aa12.97□□□□□ -0.33
RPGRIP1-208ENST00000555489 MORC1Q86VD1 984 aa12.97□□□□□ -0.33
RPGRIP1-208ENST00000555489 ZFYVE9O95405 1425 aa12.96□□□□□ -0.33
RPGRIP1-208ENST00000555489 CGNL1Q0VF96 1302 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms