RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 NPHP4O75161 1426 aaPredicted RBP16.82■□□□□ 0.28
IFT43-210ENST00000555370 NEUROD1Q13562 356 aa16.82■□□□□ 0.28
IFT43-210ENST00000555370 MEX3CQ5U5Q3 659 aaKnown RBP16.81■□□□□ 0.28
IFT43-210ENST00000555370 TIMELESSQ9UNS1 1208 aa16.81■□□□□ 0.28
IFT43-210ENST00000555370 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
IFT43-210ENST00000555370 ABCC3O15438 1527 aa16.8■□□□□ 0.28
IFT43-210ENST00000555370 TONSLQ96HA7 1378 aa16.79■□□□□ 0.28
IFT43-210ENST00000555370 SYNMO15061 1565 aa16.79■□□□□ 0.28
IFT43-210ENST00000555370 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
IFT43-210ENST00000555370 TRPM2O94759 1503 aa16.77■□□□□ 0.28
IFT43-210ENST00000555370 JCADQ9P266 1359 aa16.77■□□□□ 0.27
IFT43-210ENST00000555370 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
IFT43-210ENST00000555370 CLTCQ00610 1675 aaKnown RBP16.75■□□□□ 0.27
IFT43-210ENST00000555370 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
IFT43-210ENST00000555370 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
IFT43-210ENST00000555370 NUTM2DQ5VT03 806 aaPredicted RBP16.75■□□□□ 0.27
IFT43-210ENST00000555370 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
IFT43-210ENST00000555370 KIF1BO60333 1816 aa16.74■□□□□ 0.27
IFT43-210ENST00000555370 MED14O60244 1454 aa16.73■□□□□ 0.27
IFT43-210ENST00000555370 CLTCL1P53675 1640 aa16.73■□□□□ 0.27
IFT43-210ENST00000555370 CCDC144AA2RUR9 1427 aa16.72■□□□□ 0.27
IFT43-210ENST00000555370 LRP6O75581 1613 aa16.72■□□□□ 0.27
IFT43-210ENST00000555370 GGT6Q6P531 493 aa16.72■□□□□ 0.27
IFT43-210ENST00000555370 THEMISQ8N1K5 641 aaPredicted RBP16.7■□□□□ 0.26
IFT43-210ENST00000555370 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
IFT43-210ENST00000555370 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
IFT43-210ENST00000555370 WASHC2CQ9Y4E1 1318 aa16.68■□□□□ 0.26
IFT43-210ENST00000555370 IQGAP1P46940 1657 aa16.67■□□□□ 0.26
IFT43-210ENST00000555370 RGS12O14924 1447 aa16.67■□□□□ 0.26
IFT43-210ENST00000555370 TNRQ92752 1358 aa16.66■□□□□ 0.26
IFT43-210ENST00000555370 PPP1R15AO75807 674 aaPredicted RBP16.66■□□□□ 0.26
IFT43-210ENST00000555370 YY1P25490 414 aa16.66■□□□□ 0.26
IFT43-210ENST00000555370 PIK3C2BO00750 1634 aa16.66■□□□□ 0.26
IFT43-210ENST00000555370 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
IFT43-210ENST00000555370 FBXO31Q5XUX0 539 aaPredicted RBP16.65■□□□□ 0.26
IFT43-210ENST00000555370 L3MBTL2Q969R5 705 aa16.64■□□□□ 0.25
IFT43-210ENST00000555370 IFT172Q9UG01 1749 aa16.64■□□□□ 0.25
IFT43-210ENST00000555370 UGGT1Q9NYU2 1555 aa16.63■□□□□ 0.25
IFT43-210ENST00000555370 ATAD2Q6PL18 1390 aa16.63■□□□□ 0.25
IFT43-210ENST00000555370 NOS1P29475 1434 aa16.62■□□□□ 0.25
IFT43-210ENST00000555370 PHLPP1O60346 1717 aa16.61■□□□□ 0.25
IFT43-210ENST00000555370 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
IFT43-210ENST00000555370 SPATA31E1Q6ZUB1 1445 aa16.61■□□□□ 0.25
IFT43-210ENST00000555370 MYO5BQ9ULV0 1848 aa16.6■□□□□ 0.25
IFT43-210ENST00000555370 ADGRB3O60242 1522 aa16.6■□□□□ 0.25
IFT43-210ENST00000555370 AFF2P51816 1311 aa16.59■□□□□ 0.25
IFT43-210ENST00000555370 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
IFT43-210ENST00000555370 PPLO60437 1756 aa16.58■□□□□ 0.24
IFT43-210ENST00000555370 LRP5O75197 1615 aa16.57■□□□□ 0.24
IFT43-210ENST00000555370 ERVK-7P63135 1459 aa16.57■□□□□ 0.24
IFT43-210ENST00000555370 TRPM1Q7Z4N2 1603 aa16.56■□□□□ 0.24
IFT43-210ENST00000555370 TMEM94Q12767 1356 aa16.56■□□□□ 0.24
IFT43-210ENST00000555370 QTRT2Q9H974 415 aaKnown RBP16.56■□□□□ 0.24
IFT43-210ENST00000555370 SENP3-EIF4A1A0A087X0R7 540 aa16.54■□□□□ 0.24
IFT43-210ENST00000555370 RALGAPBQ86X10 1494 aa16.53■□□□□ 0.24
IFT43-210ENST00000555370 ZNF316A6NFI3 1004 aaPredicted RBP16.52■□□□□ 0.24
IFT43-210ENST00000555370 SLAIN2Q9P270 581 aa16.52■□□□□ 0.24
IFT43-210ENST00000555370 TMEM131LA2VDJ0 1609 aa16.52■□□□□ 0.23
IFT43-210ENST00000555370 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
IFT43-210ENST00000555370 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
IFT43-210ENST00000555370 LAMC1P11047 1609 aa16.51■□□□□ 0.23
IFT43-210ENST00000555370 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
IFT43-210ENST00000555370 PRAG1Q86YV5 1406 aa16.51■□□□□ 0.23
IFT43-210ENST00000555370 MYOM2P54296 1465 aa16.5■□□□□ 0.23
IFT43-210ENST00000555370 RGL3Q3MIN7 710 aa16.5■□□□□ 0.23
IFT43-210ENST00000555370 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
IFT43-210ENST00000555370 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
IFT43-210ENST00000555370 NLRP1Q9C000 1473 aa16.49■□□□□ 0.23
IFT43-210ENST00000555370 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
IFT43-210ENST00000555370 PROSER2Q86WR7 435 aaPredicted RBP16.47■□□□□ 0.23
IFT43-210ENST00000555370 NGLY1Q96IV0 654 aa16.47■□□□□ 0.23
IFT43-210ENST00000555370 SLC52A1Q9NWF4 448 aa16.47■□□□□ 0.23
IFT43-210ENST00000555370 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
IFT43-210ENST00000555370 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
IFT43-210ENST00000555370 ZNF326Q5BKZ1 582 aaKnown RBP16.46■□□□□ 0.23
IFT43-210ENST00000555370 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
IFT43-210ENST00000555370 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
IFT43-210ENST00000555370 NRXN1Q9ULB1 1477 aa16.43■□□□□ 0.22
IFT43-210ENST00000555370 C8orf37Q96NL8 207 aa16.43■□□□□ 0.22
IFT43-210ENST00000555370 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
IFT43-210ENST00000555370 IDI1Q13907 227 aa16.42■□□□□ 0.22
IFT43-210ENST00000555370 RPGRIP1LQ68CZ1 1315 aa16.42■□□□□ 0.22
IFT43-210ENST00000555370 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
IFT43-210ENST00000555370 SHPRHQ149N8 1683 aa16.4■□□□□ 0.22
IFT43-210ENST00000555370 MSH6P52701 1360 aa16.4■□□□□ 0.22
IFT43-210ENST00000555370 PSDA5PKW4 1024 aaPredicted RBP16.4■□□□□ 0.22
IFT43-210ENST00000555370 LTKP29376 864 aa16.4■□□□□ 0.22
IFT43-210ENST00000555370 TXNDC2Q86VQ3 553 aa16.39■□□□□ 0.21
IFT43-210ENST00000555370 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
IFT43-210ENST00000555370 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
IFT43-210ENST00000555370 KCNA6P17658 529 aa16.38■□□□□ 0.21
IFT43-210ENST00000555370 EIF4G2P78344 907 aaKnown RBP eCLIP16.38■□□□□ 0.21
IFT43-210ENST00000555370 DEFB132Q7Z7B7 95 aa16.37■□□□□ 0.21
IFT43-210ENST00000555370 USP47Q96K76 1375 aa16.37■□□□□ 0.21
IFT43-210ENST00000555370 ZFYVE9O95405 1425 aa16.36■□□□□ 0.21
IFT43-210ENST00000555370 NWD1Q149M9 1564 aa16.36■□□□□ 0.21
IFT43-210ENST00000555370 HSPA5P11021 654 aaKnown RBP16.36■□□□□ 0.21
IFT43-210ENST00000555370 NHSL1Q5SYE7 1610 aa16.36■□□□□ 0.21
IFT43-210ENST00000555370 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
IFT43-210ENST00000555370 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms