RNA–Protein interactions for RNA: ENST00000555235.1

MARK3-209, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-209ENST00000555235 WDR7Q9Y4E6 1490 aa20.87■□□□□ 0.93
MARK3-209ENST00000555235 ABCC2Q92887 1545 aa20.85■□□□□ 0.93
MARK3-209ENST00000555235 ADAMTS8Q9UP79 889 aa20.84■□□□□ 0.93
MARK3-209ENST00000555235 C8orf34Q49A92 452 aa20.83■□□□□ 0.93
MARK3-209ENST00000555235 SLC4A3P48751 1232 aa20.83■□□□□ 0.92
MARK3-209ENST00000555235 C20orf194Q5TEA3 1177 aa20.83■□□□□ 0.92
MARK3-209ENST00000555235 MADDQ8WXG6 1647 aa20.83■□□□□ 0.92
MARK3-209ENST00000555235 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.82■□□□□ 0.92
MARK3-209ENST00000555235 PLCH2O75038 1416 aa20.82■□□□□ 0.92
MARK3-209ENST00000555235 IQGAP1P46940 1657 aa20.82■□□□□ 0.92
MARK3-209ENST00000555235 PPP2R1AP30153 589 aa20.81■□□□□ 0.92
MARK3-209ENST00000555235 DNAJC5Q9H3Z4 198 aa20.81■□□□□ 0.92
MARK3-209ENST00000555235 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
MARK3-209ENST00000555235 AMER1Q5JTC6 1135 aaPredicted RBP20.79■□□□□ 0.92
MARK3-209ENST00000555235 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
MARK3-209ENST00000555235 PLEKHH1Q9ULM0 1364 aa20.78■□□□□ 0.92
MARK3-209ENST00000555235 ZNF521Q96K83 1311 aa20.78■□□□□ 0.92
MARK3-209ENST00000555235 ABCC1P33527 1531 aa20.77■□□□□ 0.92
MARK3-209ENST00000555235 SYNMO15061 1565 aa20.77■□□□□ 0.92
MARK3-209ENST00000555235 EFCAB2Q5VUJ9 269 aa20.77■□□□□ 0.92
MARK3-209ENST00000555235 DUSP27Q5VZP5 1158 aa20.77■□□□□ 0.92
MARK3-209ENST00000555235 VIRMAQ69YN4 1812 aaKnown RBP20.77■□□□□ 0.92
MARK3-209ENST00000555235 SCAPERQ9BY12 1400 aa20.76■□□□□ 0.91
MARK3-209ENST00000555235 TRPM2O94759 1503 aa20.76■□□□□ 0.91
MARK3-209ENST00000555235 RIMBP3CA6NJZ7 1639 aa20.76■□□□□ 0.91
MARK3-209ENST00000555235 RIMBP3BA6NNM3 1639 aa20.76■□□□□ 0.91
MARK3-209ENST00000555235 RIMBP3Q9UFD9 1639 aa20.76■□□□□ 0.91
MARK3-209ENST00000555235 TRAPPC8Q9Y2L5 1435 aa20.75■□□□□ 0.91
MARK3-209ENST00000555235 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
MARK3-209ENST00000555235 WDR43Q15061 677 aaKnown RBP eCLIP20.75■□□□□ 0.91
MARK3-209ENST00000555235 CDCA8Q53HL2 280 aa20.75■□□□□ 0.91
MARK3-209ENST00000555235 UBE2Q2Q8WVN8 375 aa20.75■□□□□ 0.91
MARK3-209ENST00000555235 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
MARK3-209ENST00000555235 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
MARK3-209ENST00000555235 EIF3AQ14152 1382 aaKnown RBP20.75■□□□□ 0.91
MARK3-209ENST00000555235 FRAT2O75474 233 aaPredicted RBP20.74■□□□□ 0.91
MARK3-209ENST00000555235 FAM43AQ8N2R8 423 aa20.74■□□□□ 0.91
MARK3-209ENST00000555235 PTPRTO14522 1441 aa20.74■□□□□ 0.91
MARK3-209ENST00000555235 ASXL1Q8IXJ9 1541 aa20.73■□□□□ 0.91
MARK3-209ENST00000555235 PIK3C2GO75747 1445 aa20.73■□□□□ 0.91
MARK3-209ENST00000555235 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
MARK3-209ENST00000555235 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
MARK3-209ENST00000555235 CEP152O94986 1710 aa20.72■□□□□ 0.91
MARK3-209ENST00000555235 RSPH6AQ9H0K4 717 aa20.71■□□□□ 0.91
MARK3-209ENST00000555235 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
MARK3-209ENST00000555235 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
MARK3-209ENST00000555235 ZCCHC11Q5TAX3 1644 aaKnown RBP20.69■□□□□ 0.9
MARK3-209ENST00000555235 MYOM1P52179 1685 aa20.69■□□□□ 0.9
MARK3-209ENST00000555235 RGS3P49796 1198 aa20.69■□□□□ 0.9
MARK3-209ENST00000555235 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
MARK3-209ENST00000555235 SPAG9O60271 1321 aaKnown RBP20.68■□□□□ 0.9
MARK3-209ENST00000555235 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
MARK3-209ENST00000555235 UHRF1BP1LA0JNW5 1464 aa20.67■□□□□ 0.9
MARK3-209ENST00000555235 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
MARK3-209ENST00000555235 DEPDC5O75140 1603 aa20.66■□□□□ 0.9
MARK3-209ENST00000555235 EIF5BO60841 1220 aaKnown RBP20.66■□□□□ 0.9
MARK3-209ENST00000555235 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
MARK3-209ENST00000555235 TET3O43151 1660 aa20.64■□□□□ 0.89
MARK3-209ENST00000555235 NKTRP30414 1462 aaKnown RBP20.63■□□□□ 0.89
MARK3-209ENST00000555235 ARAP3Q8WWN8 1544 aa20.63■□□□□ 0.89
MARK3-209ENST00000555235 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
MARK3-209ENST00000555235 NEURL4Q96JN8 1562 aa20.62■□□□□ 0.89
MARK3-209ENST00000555235 BECN1Q14457 450 aa20.62■□□□□ 0.89
MARK3-209ENST00000555235 KDM5AP29375 1690 aaKnown RBP20.62■□□□□ 0.89
MARK3-209ENST00000555235 VWDEQ8N2E2 1590 aa20.61■□□□□ 0.89
MARK3-209ENST00000555235 MAPK8IP3Q9UPT6 1336 aa20.6■□□□□ 0.89
MARK3-209ENST00000555235 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
MARK3-209ENST00000555235 SPINK5Q9NQ38 1064 aaPredicted RBP20.58■□□□□ 0.89
MARK3-209ENST00000555235 USP19O94966 1318 aa20.58■□□□□ 0.88
MARK3-209ENST00000555235 NPM1P06748 294 aaKnown RBP eCLIP20.58■□□□□ 0.88
MARK3-209ENST00000555235 L1TD1Q5T7N2 865 aaKnown RBP20.58■□□□□ 0.88
MARK3-209ENST00000555235 NINLQ9Y2I6 1382 aa20.58■□□□□ 0.88
MARK3-209ENST00000555235 ERVK-7P63135 1459 aa20.57■□□□□ 0.88
MARK3-209ENST00000555235 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
MARK3-209ENST00000555235 APAF1O14727 1248 aa20.57■□□□□ 0.88
MARK3-209ENST00000555235 SLC24A1O60721 1099 aa20.57■□□□□ 0.88
MARK3-209ENST00000555235 KANK1Q14678 1352 aa20.57■□□□□ 0.88
MARK3-209ENST00000555235 MYOM2P54296 1465 aa20.56■□□□□ 0.88
MARK3-209ENST00000555235 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
MARK3-209ENST00000555235 MAP3K4Q9Y6R4 1608 aa20.55■□□□□ 0.88
MARK3-209ENST00000555235 E9PSI1 815 aa20.55■□□□□ 0.88
MARK3-209ENST00000555235 INO80Q9ULG1 1556 aaPredicted RBP20.54■□□□□ 0.88
MARK3-209ENST00000555235 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
MARK3-209ENST00000555235 CFAP70Q5T0N1 1121 aa20.54■□□□□ 0.88
MARK3-209ENST00000555235 CARD14Q9BXL6 1004 aa20.54■□□□□ 0.88
MARK3-209ENST00000555235 ATP7AQ04656 1500 aa20.54■□□□□ 0.88
MARK3-209ENST00000555235 ABCA6Q8N139 1617 aa20.54■□□□□ 0.88
MARK3-209ENST00000555235 POGKQ9P215 609 aa20.53■□□□□ 0.88
MARK3-209ENST00000555235 BCAR3O75815 825 aa20.52■□□□□ 0.88
MARK3-209ENST00000555235 IGHDP01880 384 aa20.51■□□□□ 0.87
MARK3-209ENST00000555235 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
MARK3-209ENST00000555235 ADGRF5Q8IZF2 1346 aa20.51■□□□□ 0.87
MARK3-209ENST00000555235 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
MARK3-209ENST00000555235 MROH1Q8NDA8 1641 aa20.5■□□□□ 0.87
MARK3-209ENST00000555235 KIF3BO15066 747 aa20.5■□□□□ 0.87
MARK3-209ENST00000555235 CLUAP1Q96AJ1 413 aa20.5■□□□□ 0.87
MARK3-209ENST00000555235 DMRT2Q9Y5R5 561 aa20.5■□□□□ 0.87
MARK3-209ENST00000555235 UGGT1Q9NYU2 1555 aa20.49■□□□□ 0.87
MARK3-209ENST00000555235 UPF2Q9HAU5 1272 aaKnown RBP20.48■□□□□ 0.87
MARK3-209ENST00000555235 ABCA9Q8IUA7 1624 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms