RNA–Protein interactions for RNA: ENST00000555170.1

TRIM9-204, Transcript of tripartite motif containing 9, humanhuman

TSL 4

Gene TRIM9, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM9-204ENST00000555170 JCADQ9P266 1359 aa12.75□□□□□ -0.37
TRIM9-204ENST00000555170 UBR1Q8IWV7 1749 aa12.74□□□□□ -0.37
TRIM9-204ENST00000555170 SCAF11Q99590 1463 aaKnown RBP12.74□□□□□ -0.37
TRIM9-204ENST00000555170 PROSER2Q86WR7 435 aaPredicted RBP12.74□□□□□ -0.37
TRIM9-204ENST00000555170 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
TRIM9-204ENST00000555170 RXRBP28702 533 aa12.73□□□□□ -0.37
TRIM9-204ENST00000555170 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
TRIM9-204ENST00000555170 SLAIN2Q9P270 581 aa12.72□□□□□ -0.37
TRIM9-204ENST00000555170 KCNA6P17658 529 aa12.71□□□□□ -0.37
TRIM9-204ENST00000555170 RPRD2Q5VT52 1461 aaKnown RBP12.71□□□□□ -0.38
TRIM9-204ENST00000555170 NOS1P29475 1434 aa12.71□□□□□ -0.38
TRIM9-204ENST00000555170 LRP6O75581 1613 aa12.7□□□□□ -0.38
TRIM9-204ENST00000555170 MYO5BQ9ULV0 1848 aa12.7□□□□□ -0.38
TRIM9-204ENST00000555170 EID1Q9Y6B2 187 aa12.7□□□□□ -0.38
TRIM9-204ENST00000555170 SPHKAPQ2M3C7 1700 aa12.7□□□□□ -0.38
TRIM9-204ENST00000555170 NUP155O75694 1391 aa12.69□□□□□ -0.38
TRIM9-204ENST00000555170 ARHGAP23Q9P227 1491 aa12.69□□□□□ -0.38
TRIM9-204ENST00000555170 KDM5AP29375 1690 aaKnown RBP12.69□□□□□ -0.38
TRIM9-204ENST00000555170 PHLPP1O60346 1717 aa12.68□□□□□ -0.38
TRIM9-204ENST00000555170 SLC26A8Q96RN1 970 aa12.68□□□□□ -0.38
TRIM9-204ENST00000555170 ADGRB3O60242 1522 aa12.67□□□□□ -0.38
TRIM9-204ENST00000555170 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
TRIM9-204ENST00000555170 SLIT1O75093 1534 aa12.67□□□□□ -0.38
TRIM9-204ENST00000555170 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
TRIM9-204ENST00000555170 MSH6P52701 1360 aa12.64□□□□□ -0.39
TRIM9-204ENST00000555170 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
TRIM9-204ENST00000555170 COL16A1Q07092 1604 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-204ENST00000555170 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-204ENST00000555170 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-204ENST00000555170 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-204ENST00000555170 TMEM2Q9UHN6 1383 aa12.63□□□□□ -0.39
TRIM9-204ENST00000555170 CDK12Q9NYV4 1490 aaPredicted RBP12.63□□□□□ -0.39
TRIM9-204ENST00000555170 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
TRIM9-204ENST00000555170 TRPM2O94759 1503 aa12.62□□□□□ -0.39
TRIM9-204ENST00000555170 IDI1Q13907 227 aa12.61□□□□□ -0.39
TRIM9-204ENST00000555170 NUTM2DQ5VT03 806 aaPredicted RBP12.61□□□□□ -0.39
TRIM9-204ENST00000555170 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
TRIM9-204ENST00000555170 AFF2P51816 1311 aa12.61□□□□□ -0.39
TRIM9-204ENST00000555170 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
TRIM9-204ENST00000555170 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
TRIM9-204ENST00000555170 QTRT2Q9H974 415 aaKnown RBP12.59□□□□□ -0.39
TRIM9-204ENST00000555170 RGS12O14924 1447 aa12.58□□□□□ -0.4
TRIM9-204ENST00000555170 KIF1BO60333 1816 aa12.58□□□□□ -0.4
TRIM9-204ENST00000555170 RBM6P78332 1123 aaKnown RBP12.57□□□□□ -0.4
TRIM9-204ENST00000555170 BCANQ96GW7 911 aa12.57□□□□□ -0.4
TRIM9-204ENST00000555170 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
TRIM9-204ENST00000555170 ZFYVE9O95405 1425 aa12.56□□□□□ -0.4
TRIM9-204ENST00000555170 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
TRIM9-204ENST00000555170 NKTRP30414 1462 aaKnown RBP12.56□□□□□ -0.4
TRIM9-204ENST00000555170 SLC4A1APQ9BWU0 796 aaKnown RBP12.55□□□□□ -0.4
TRIM9-204ENST00000555170 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
TRIM9-204ENST00000555170 FOXD1Q16676 465 aa12.54□□□□□ -0.4
TRIM9-204ENST00000555170 C8orf37Q96NL8 207 aa12.54□□□□□ -0.4
TRIM9-204ENST00000555170 NWD1Q149M9 1564 aa12.54□□□□□ -0.4
TRIM9-204ENST00000555170 C14orf37Q86TY3 774 aa12.53□□□□□ -0.4
TRIM9-204ENST00000555170 RIMS2Q9UQ26 1411 aa12.53□□□□□ -0.4
TRIM9-204ENST00000555170 NEXMIFQ5QGS0 1516 aa12.52□□□□□ -0.4
TRIM9-204ENST00000555170 AHDC1Q5TGY3 1603 aaPredicted RBP12.52□□□□□ -0.4
TRIM9-204ENST00000555170 MPHOSPH9Q99550 1183 aa12.52□□□□□ -0.41
TRIM9-204ENST00000555170 ATF3P18847 181 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 BRINP3Q76B58 766 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 CADPS2Q86UW7 1296 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 C19orf44Q9H6X5 657 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 ATAD2Q6PL18 1390 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 NRXN3Q9Y4C0 1643 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 IFT172Q9UG01 1749 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 PPLO60437 1756 aa12.51□□□□□ -0.41
TRIM9-204ENST00000555170 CHGAP10645 457 aaKnown RBP12.5□□□□□ -0.41
TRIM9-204ENST00000555170 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
TRIM9-204ENST00000555170 NGLY1Q96IV0 654 aa12.49□□□□□ -0.41
TRIM9-204ENST00000555170 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
TRIM9-204ENST00000555170 PLEKHG1Q9ULL1 1385 aa12.47□□□□□ -0.41
TRIM9-204ENST00000555170 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
TRIM9-204ENST00000555170 CCDC144AA2RUR9 1427 aa12.46□□□□□ -0.41
TRIM9-204ENST00000555170 ADAMTS2O95450 1211 aa12.46□□□□□ -0.41
TRIM9-204ENST00000555170 LRRC59Q96AG4 307 aaKnown RBP12.46□□□□□ -0.41
TRIM9-204ENST00000555170 TBX22Q9Y458 520 aa12.46□□□□□ -0.41
TRIM9-204ENST00000555170 ADAMTS13Q76LX8 1427 aa12.45□□□□□ -0.42
TRIM9-204ENST00000555170 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
TRIM9-204ENST00000555170 ACIN1Q9UKV3 1341 aaKnown RBP12.45□□□□□ -0.42
TRIM9-204ENST00000555170 DDX17Q92841 729 aaKnown RBP12.45□□□□□ -0.42
TRIM9-204ENST00000555170 SPATA31E1Q6ZUB1 1445 aa12.45□□□□□ -0.42
TRIM9-204ENST00000555170 HRCP23327 699 aa12.44□□□□□ -0.42
TRIM9-204ENST00000555170 CCDC125Q86Z20 511 aa12.44□□□□□ -0.42
TRIM9-204ENST00000555170 EP400Q96L91 3159 aa12.43□□□□□ -0.42
TRIM9-204ENST00000555170 PPP1R15AO75807 674 aaPredicted RBP12.43□□□□□ -0.42
TRIM9-204ENST00000555170 USP21Q9UK80 565 aa12.43□□□□□ -0.42
TRIM9-204ENST00000555170 ANKRD30BQ9BXX2 1392 aa12.43□□□□□ -0.42
TRIM9-204ENST00000555170 ZNF326Q5BKZ1 582 aaKnown RBP12.42□□□□□ -0.42
TRIM9-204ENST00000555170 XRN1Q8IZH2 1706 aaKnown RBP12.41□□□□□ -0.42
TRIM9-204ENST00000555170 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.41□□□□□ -0.42
TRIM9-204ENST00000555170 TRPC5Q9UL62 973 aaPredicted RBP12.41□□□□□ -0.42
TRIM9-204ENST00000555170 PNPLA6Q8IY17 1366 aa12.41□□□□□ -0.42
TRIM9-204ENST00000555170 HDGFP51858 240 aaKnown RBP12.4□□□□□ -0.42
TRIM9-204ENST00000555170 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.42
TRIM9-204ENST00000555170 ASXL1Q8IXJ9 1541 aa12.4□□□□□ -0.42
TRIM9-204ENST00000555170 AMOTL2Q9Y2J4 779 aa12.39□□□□□ -0.43
TRIM9-204ENST00000555170 PTPRUQ92729 1446 aa12.38□□□□□ -0.43
TRIM9-204ENST00000555170 DEFB132Q7Z7B7 95 aa12.38□□□□□ -0.43
TRIM9-204ENST00000555170 FNBP4Q8N3X1 1017 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms