RNA–Protein interactions for RNA: ENST00000555110.1

PRKCH-212, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-212ENST00000555110 CDK12Q9NYV4 1490 aaPredicted RBP6.06□□□□□ -1.44
PRKCH-212ENST00000555110 ROBO1Q9Y6N7 1651 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 MROH1Q8NDA8 1641 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 NWD1Q149M9 1564 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 MAST1Q9Y2H9 1570 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 MSH6P52701 1360 aa6.06□□□□□ -1.44
PRKCH-212ENST00000555110 SETD1AO15047 1707 aaKnown RBP6.05□□□□□ -1.44
PRKCH-212ENST00000555110 ERBINQ96RT1 1412 aa6.04□□□□□ -1.44
PRKCH-212ENST00000555110 NCOA3Q9Y6Q9 1424 aa6.04□□□□□ -1.44
PRKCH-212ENST00000555110 EFCAB6Q5THR3 1501 aa6.04□□□□□ -1.44
PRKCH-212ENST00000555110 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
PRKCH-212ENST00000555110 FOXD1Q16676 465 aa6.03□□□□□ -1.44
PRKCH-212ENST00000555110 ERICH6Q7L0X2 663 aa6.03□□□□□ -1.44
PRKCH-212ENST00000555110 SLAIN2Q9P270 581 aa6.03□□□□□ -1.44
PRKCH-212ENST00000555110 XIRP1Q702N8 1843 aaKnown RBP6.03□□□□□ -1.44
PRKCH-212ENST00000555110 DUOX2Q9NRD8 1548 aa6.03□□□□□ -1.44
PRKCH-212ENST00000555110 LRP6O75581 1613 aa6.03□□□□□ -1.44
PRKCH-212ENST00000555110 COL16A1Q07092 1604 aaPredicted RBP6.03□□□□□ -1.44
PRKCH-212ENST00000555110 TET3O43151 1660 aa6.02□□□□□ -1.45
PRKCH-212ENST00000555110 MEX3CQ5U5Q3 659 aaKnown RBP6.02□□□□□ -1.45
PRKCH-212ENST00000555110 PROSER2Q86WR7 435 aaPredicted RBP6.02□□□□□ -1.45
PRKCH-212ENST00000555110 LMTK2Q8IWU2 1503 aa6.02□□□□□ -1.45
PRKCH-212ENST00000555110 AHDC1Q5TGY3 1603 aaPredicted RBP6.02□□□□□ -1.45
PRKCH-212ENST00000555110 KIF15Q9NS87 1388 aa6.02□□□□□ -1.45
PRKCH-212ENST00000555110 MYOM3Q5VTT5 1437 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 ADGRB3O60242 1522 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 RXRBP28702 533 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 STAG3Q9UJ98 1225 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 PHLPP1O60346 1717 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 KANK1Q14678 1352 aa6.01□□□□□ -1.45
PRKCH-212ENST00000555110 PIK3C2BO00750 1634 aa6□□□□□ -1.45
PRKCH-212ENST00000555110 TRIM52Q96A61 297 aa6□□□□□ -1.45
PRKCH-212ENST00000555110 PLEKHG1Q9ULL1 1385 aa6□□□□□ -1.45
PRKCH-212ENST00000555110 NOS1P29475 1434 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 SHPRHQ149N8 1683 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 TRIM26Q12899 539 aaPredicted RBP5.99□□□□□ -1.45
PRKCH-212ENST00000555110 NPM2Q86SE8 214 aaKnown RBP5.99□□□□□ -1.45
PRKCH-212ENST00000555110 CADPS2Q86UW7 1296 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 SLC26A8Q96RN1 970 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 SLC52A1Q9NWF4 448 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 CEP152O94986 1710 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 ZFYVE9O95405 1425 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 DCCP43146 1447 aa5.99□□□□□ -1.45
PRKCH-212ENST00000555110 PIK3R4Q99570 1358 aa5.98□□□□□ -1.45
PRKCH-212ENST00000555110 IDI1Q13907 227 aa5.98□□□□□ -1.45
PRKCH-212ENST00000555110 RGS12O14924 1447 aa5.98□□□□□ -1.45
PRKCH-212ENST00000555110 SETD5Q9C0A6 1442 aa5.98□□□□□ -1.45
PRKCH-212ENST00000555110 DIP2AQ14689 1571 aa5.97□□□□□ -1.45
PRKCH-212ENST00000555110 RPRD2Q5VT52 1461 aaKnown RBP5.97□□□□□ -1.45
PRKCH-212ENST00000555110 ATAD2Q6PL18 1390 aa5.97□□□□□ -1.45
PRKCH-212ENST00000555110 PAXIP1Q6ZW49 1069 aaPredicted RBP5.97□□□□□ -1.45
PRKCH-212ENST00000555110 RBM33Q96EV2 1170 aaKnown RBP5.97□□□□□ -1.45
PRKCH-212ENST00000555110 TSHZ2Q9NRE2 1034 aa5.97□□□□□ -1.45
PRKCH-212ENST00000555110 AFF2P51816 1311 aa5.97□□□□□ -1.45
PRKCH-212ENST00000555110 ATF3P18847 181 aa5.96□□□□□ -1.46
PRKCH-212ENST00000555110 HDGFP51858 240 aaKnown RBP5.96□□□□□ -1.46
PRKCH-212ENST00000555110 RBM6P78332 1123 aaKnown RBP5.96□□□□□ -1.46
PRKCH-212ENST00000555110 C19orf44Q9H6X5 657 aa5.96□□□□□ -1.46
PRKCH-212ENST00000555110 TBX22Q9Y458 520 aa5.96□□□□□ -1.46
PRKCH-212ENST00000555110 ASXL1Q8IXJ9 1541 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 ABCC5O15440 1437 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 PPP1R15AO75807 674 aaPredicted RBP5.95□□□□□ -1.46
PRKCH-212ENST00000555110 BRINP3Q76B58 766 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.95□□□□□ -1.46
PRKCH-212ENST00000555110 CNKSR2Q8WXI2 1034 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 CFAP44Q96MT7 982 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 RIMS2Q9UQ26 1411 aa5.95□□□□□ -1.46
PRKCH-212ENST00000555110 ANKRD30AQ9BXX3 1397 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 ADAMTS13Q76LX8 1427 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 VPS8Q8N3P4 1428 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 HRCP23327 699 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 NGLY1Q96IV0 654 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.94□□□□□ -1.46
PRKCH-212ENST00000555110 ZRANB1Q9UGI0 708 aa5.94□□□□□ -1.46
PRKCH-212ENST00000555110 PNPLA6Q8IY17 1366 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 UTRNP46939 3433 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 DAPK1P53355 1430 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 LRRC59Q96AG4 307 aaKnown RBP5.93□□□□□ -1.46
PRKCH-212ENST00000555110 RRP7BPQ9NSQ0 103 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 CROCC2H7BZ55 1655 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 TRPM2O94759 1503 aa5.93□□□□□ -1.46
PRKCH-212ENST00000555110 CHD2O14647 1828 aaKnown RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 PTPN23Q9H3S7 1636 aa5.92□□□□□ -1.46
PRKCH-212ENST00000555110 MST1RQ04912 1400 aa5.92□□□□□ -1.46
PRKCH-212ENST00000555110 ADGRL2O95490 1459 aa5.92□□□□□ -1.46
PRKCH-212ENST00000555110 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 NUTM2BA6NNL0 878 aaPredicted RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 NUTM2EB1AL46 878 aaPredicted RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 CCDC125Q86Z20 511 aa5.92□□□□□ -1.46
PRKCH-212ENST00000555110 NUTM2AQ8IVF1 878 aaPredicted RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 PELP1Q8IZL8 1130 aaKnown RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 C8orf37Q96NL8 207 aa5.92□□□□□ -1.46
PRKCH-212ENST00000555110 QTRT2Q9H974 415 aaKnown RBP5.92□□□□□ -1.46
PRKCH-212ENST00000555110 NUTM2DQ5VT03 806 aaPredicted RBP5.91□□□□□ -1.46
PRKCH-212ENST00000555110 TRPC5Q9UL62 973 aaPredicted RBP5.91□□□□□ -1.46
PRKCH-212ENST00000555110 TMEM131LA2VDJ0 1609 aa5.91□□□□□ -1.46
PRKCH-212ENST00000555110 NHSL1Q5SYE7 1610 aa5.91□□□□□ -1.46
PRKCH-212ENST00000555110 PTCH1Q13635 1447 aa5.91□□□□□ -1.46
PRKCH-212ENST00000555110 ADGRL3Q9HAR2 1447 aa5.91□□□□□ -1.46
PRKCH-212ENST00000555110 CEP350Q5VT06 3117 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms