RNA–Protein interactions for RNA: ENST00000554981.1

TMEM260-205, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-205ENST00000554981 SGIP1Q9BQI5 828 aa8.82□□□□□ -1
TMEM260-205ENST00000554981 BCL11BQ9C0K0 894 aaPredicted RBP8.82□□□□□ -1
TMEM260-205ENST00000554981 MROH2AA6NES4 1674 aa8.81□□□□□ -1
TMEM260-205ENST00000554981 CLTCQ00610 1675 aaKnown RBP8.81□□□□□ -1
TMEM260-205ENST00000554981 PDAP1Q13442 181 aaKnown RBP8.81□□□□□ -1
TMEM260-205ENST00000554981 MTUS2Q5JR59 1369 aa8.81□□□□□ -1
TMEM260-205ENST00000554981 SAMD9LQ8IVG5 1584 aa8.81□□□□□ -1
TMEM260-205ENST00000554981 NEURL4Q96JN8 1562 aa8.81□□□□□ -1
TMEM260-205ENST00000554981 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
TMEM260-205ENST00000554981 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
TMEM260-205ENST00000554981 VWDEQ8N2E2 1590 aa8.79□□□□□ -1
TMEM260-205ENST00000554981 MLH3Q9UHC1 1453 aa8.79□□□□□ -1
TMEM260-205ENST00000554981 PSEN1P49768 467 aa8.79□□□□□ -1
TMEM260-205ENST00000554981 PHF12Q96QT6 1004 aa8.79□□□□□ -1
TMEM260-205ENST00000554981 POLR1AO95602 1720 aaPredicted RBP8.79□□□□□ -1
TMEM260-205ENST00000554981 DNMT1P26358 1616 aaKnown RBP8.79□□□□□ -1
TMEM260-205ENST00000554981 EHBP1L1Q8N3D4 1523 aa8.79□□□□□ -1
TMEM260-205ENST00000554981 TIAM1Q13009 1591 aa8.78□□□□□ -1
TMEM260-205ENST00000554981 IFNL1Q8IU54 200 aa8.78□□□□□ -1
TMEM260-205ENST00000554981 GPATCH8Q9UKJ3 1502 aaKnown RBP8.78□□□□□ -1
TMEM260-205ENST00000554981 KIDINS220Q9ULH0 1771 aa8.78□□□□□ -1
TMEM260-205ENST00000554981 CCNB3Q8WWL7 1395 aa8.77□□□□□ -1.01
TMEM260-205ENST00000554981 STRCP1A6NGW2 1772 aa8.77□□□□□ -1.01
TMEM260-205ENST00000554981 GABBR2O75899 941 aa8.77□□□□□ -1.01
TMEM260-205ENST00000554981 UPF1Q92900 1129 aaKnown RBP eCLIP8.77□□□□□ -1.01
TMEM260-205ENST00000554981 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
TMEM260-205ENST00000554981 LRRC7Q96NW7 1537 aa8.75□□□□□ -1.01
TMEM260-205ENST00000554981 VPS8Q8N3P4 1428 aa8.75□□□□□ -1.01
TMEM260-205ENST00000554981 HNRNPMP52272 730 aaKnown RBP eCLIP8.75□□□□□ -1.01
TMEM260-205ENST00000554981 CFDP1Q9UEE9 299 aaPredicted RBP8.75□□□□□ -1.01
TMEM260-205ENST00000554981 RNF17Q9BXT8 1623 aaKnown RBP8.75□□□□□ -1.01
TMEM260-205ENST00000554981 RYDENQ9NUL5 291 aaKnown RBP8.74□□□□□ -1.01
TMEM260-205ENST00000554981 ZNF644Q9H582 1327 aaPredicted RBP8.74□□□□□ -1.01
TMEM260-205ENST00000554981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.73□□□□□ -1.01
TMEM260-205ENST00000554981 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
TMEM260-205ENST00000554981 GGT6Q6P531 493 aa8.73□□□□□ -1.01
TMEM260-205ENST00000554981 ATP7AQ04656 1500 aa8.73□□□□□ -1.01
TMEM260-205ENST00000554981 INO80Q9ULG1 1556 aaPredicted RBP8.73□□□□□ -1.01
TMEM260-205ENST00000554981 TRIM52Q96A61 297 aa8.72□□□□□ -1.01
TMEM260-205ENST00000554981 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
TMEM260-205ENST00000554981 NPHP4O75161 1426 aaPredicted RBP8.71□□□□□ -1.01
TMEM260-205ENST00000554981 PLEKHH2Q8IVE3 1493 aa8.71□□□□□ -1.01
TMEM260-205ENST00000554981 NKX1-1Q15270 411 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-205ENST00000554981 FBXO31Q5XUX0 539 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-205ENST00000554981 ANKLE2Q86XL3 938 aa8.71□□□□□ -1.02
TMEM260-205ENST00000554981 CAMSAP2Q08AD1 1489 aa8.7□□□□□ -1.02
TMEM260-205ENST00000554981 LRRC9Q6ZRR7 1453 aa8.7□□□□□ -1.02
TMEM260-205ENST00000554981 KIAA1107Q9UPP5 1409 aa8.7□□□□□ -1.02
TMEM260-205ENST00000554981 IQGAP1P46940 1657 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 GOLGA2Q08379 1002 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 VSIG10Q8N0Z9 540 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 SYNMO15061 1565 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 ADGBQ8N7X0 1667 aa8.69□□□□□ -1.02
TMEM260-205ENST00000554981 GTPBP6O43824 516 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-205ENST00000554981 CLCN6P51797 869 aa8.68□□□□□ -1.02
TMEM260-205ENST00000554981 KANK4Q5T7N3 995 aaPredicted RBP8.68□□□□□ -1.02
TMEM260-205ENST00000554981 CABP2Q9NPB3 220 aa8.68□□□□□ -1.02
TMEM260-205ENST00000554981 TNRQ92752 1358 aa8.68□□□□□ -1.02
TMEM260-205ENST00000554981 A2MP01023 1474 aa8.68□□□□□ -1.02
TMEM260-205ENST00000554981 MBD5Q9P267 1494 aa8.68□□□□□ -1.02
TMEM260-205ENST00000554981 XIRP1Q702N8 1843 aaKnown RBP8.68□□□□□ -1.02
TMEM260-205ENST00000554981 MED14O60244 1454 aa8.67□□□□□ -1.02
TMEM260-205ENST00000554981 PLXNC1O60486 1568 aa8.67□□□□□ -1.02
TMEM260-205ENST00000554981 CCDC141Q6ZP82 1450 aa8.67□□□□□ -1.02
TMEM260-205ENST00000554981 TMEM106CQ9BVX2 250 aa8.67□□□□□ -1.02
TMEM260-205ENST00000554981 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
TMEM260-205ENST00000554981 TSHZ2Q9NRE2 1034 aa8.66□□□□□ -1.02
TMEM260-205ENST00000554981 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.02
TMEM260-205ENST00000554981 UGGT1Q9NYU2 1555 aa8.65□□□□□ -1.03
TMEM260-205ENST00000554981 MAP3K1Q13233 1512 aa8.64□□□□□ -1.03
TMEM260-205ENST00000554981 FAM135BQ49AJ0 1406 aa8.64□□□□□ -1.03
TMEM260-205ENST00000554981 THEMISQ8N1K5 641 aaPredicted RBP8.64□□□□□ -1.03
TMEM260-205ENST00000554981 EFCAB3Q8N7B9 438 aa8.64□□□□□ -1.03
TMEM260-205ENST00000554981 ARHGEF5Q12774 1597 aa8.64□□□□□ -1.03
TMEM260-205ENST00000554981 MYOM3Q5VTT5 1437 aa8.63□□□□□ -1.03
TMEM260-205ENST00000554981 ZC3H13Q5T200 1668 aaKnown RBP8.63□□□□□ -1.03
TMEM260-205ENST00000554981 POTEIP0CG38 1075 aa8.63□□□□□ -1.03
TMEM260-205ENST00000554981 FAM135AQ9P2D6 1515 aa8.63□□□□□ -1.03
TMEM260-205ENST00000554981 LRP6O75581 1613 aa8.62□□□□□ -1.03
TMEM260-205ENST00000554981 SOX12O15370 315 aa8.62□□□□□ -1.03
TMEM260-205ENST00000554981 GALR2O43603 387 aaPredicted RBP8.62□□□□□ -1.03
TMEM260-205ENST00000554981 MKRN3Q13064 507 aaKnown RBP8.62□□□□□ -1.03
TMEM260-205ENST00000554981 RBM33Q96EV2 1170 aaKnown RBP8.62□□□□□ -1.03
TMEM260-205ENST00000554981 TRPC6Q9Y210 931 aa8.62□□□□□ -1.03
TMEM260-205ENST00000554981 RTEL1-TNFRSF6BF6WH68 1400 aa8.62□□□□□ -1.03
TMEM260-205ENST00000554981 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
TMEM260-205ENST00000554981 TIE1P35590 1138 aa8.61□□□□□ -1.03
TMEM260-205ENST00000554981 NLRP6P59044 892 aa8.61□□□□□ -1.03
TMEM260-205ENST00000554981 PZPP20742 1482 aa8.61□□□□□ -1.03
TMEM260-205ENST00000554981 PHLPP1O60346 1717 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 CROCC2H7BZ55 1655 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 KIF3BO15066 747 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 MEX3CQ5U5Q3 659 aaKnown RBP8.6□□□□□ -1.03
TMEM260-205ENST00000554981 MIA2Q96PC5 1412 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 MAST1Q9Y2H9 1570 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 SETBP1Q9Y6X0 1596 aa8.6□□□□□ -1.03
TMEM260-205ENST00000554981 DHX29Q7Z478 1369 aaKnown RBP8.6□□□□□ -1.03
TMEM260-205ENST00000554981 RXRBP28702 533 aa8.59□□□□□ -1.03
TMEM260-205ENST00000554981 MFRPQ9BY79 579 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms