RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 MDM2Q00987 491 aaPredicted RBP9.85□□□□□ -0.83
FCF1-207ENST00000554973 FOXD4L5Q5VV16 416 aaPredicted RBP9.85□□□□□ -0.83
FCF1-207ENST00000554973 FOXD4L4Q8WXT5 416 aaPredicted RBP9.85□□□□□ -0.83
FCF1-207ENST00000554973 POLR3EQ9NVU0 708 aa9.85□□□□□ -0.83
FCF1-207ENST00000554973 PRIM1P49642 420 aaKnown RBP9.83□□□□□ -0.84
FCF1-207ENST00000554973 SNRKQ9NRH2 765 aa9.83□□□□□ -0.84
FCF1-207ENST00000554973 TMEM259Q4ZIN3 620 aa9.82□□□□□ -0.84
FCF1-207ENST00000554973 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
FCF1-207ENST00000554973 E9PSI1 815 aa9.8□□□□□ -0.84
FCF1-207ENST00000554973 MYSM1Q5VVJ2 828 aa9.8□□□□□ -0.84
FCF1-207ENST00000554973 UPF1Q92900 1129 aaKnown RBP eCLIP9.8□□□□□ -0.84
FCF1-207ENST00000554973 KDM4FA0A1W2PPD8 638 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 ARHGAP33O14559 1287 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 IGSF3O75054 1194 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 RFC5P40937 340 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 KCNA1Q09470 495 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 CALR3Q96L12 384 aaKnown RBP9.79□□□□□ -0.84
FCF1-207ENST00000554973 FAM217BQ9NTX9 383 aaPredicted RBP9.79□□□□□ -0.84
FCF1-207ENST00000554973 AXIN2Q9Y2T1 843 aa9.79□□□□□ -0.84
FCF1-207ENST00000554973 CLK2P49760 499 aaKnown RBP9.78□□□□□ -0.84
FCF1-207ENST00000554973 ZNF428Q96B54 188 aa9.78□□□□□ -0.84
FCF1-207ENST00000554973 PHOX2BQ99453 314 aa9.78□□□□□ -0.84
FCF1-207ENST00000554973 NPDC1Q9NQX5 325 aaPredicted RBP9.78□□□□□ -0.84
FCF1-207ENST00000554973 BRD1O95696 1058 aa9.77□□□□□ -0.85
FCF1-207ENST00000554973 POTEEQ6S8J3 1075 aa9.77□□□□□ -0.85
FCF1-207ENST00000554973 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
FCF1-207ENST00000554973 PPP2R2DQ66LE6 453 aa9.76□□□□□ -0.85
FCF1-207ENST00000554973 EVI5O60447 810 aa9.75□□□□□ -0.85
FCF1-207ENST00000554973 KCNH8Q96L42 1107 aa9.75□□□□□ -0.85
FCF1-207ENST00000554973 GDPD2Q9HCC8 539 aa9.75□□□□□ -0.85
FCF1-207ENST00000554973 PRM3Q9NNZ6 103 aa9.75□□□□□ -0.85
FCF1-207ENST00000554973 SOCS7O14512 581 aa9.74□□□□□ -0.85
FCF1-207ENST00000554973 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
FCF1-207ENST00000554973 USTQ9Y2C2 406 aa9.73□□□□□ -0.85
FCF1-207ENST00000554973 OATP04181 439 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 ADGRD1Q6QNK2 874 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 MTMR14Q8NCE2 650 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 GLMNQ92990 594 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 PBXIP1Q96AQ6 731 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 TBC1D2Q9BYX2 928 aa9.72□□□□□ -0.85
FCF1-207ENST00000554973 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
FCF1-207ENST00000554973 TK2O00142 265 aa9.7□□□□□ -0.86
FCF1-207ENST00000554973 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
FCF1-207ENST00000554973 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
FCF1-207ENST00000554973 EPAS1Q99814 870 aa9.7□□□□□ -0.86
FCF1-207ENST00000554973 ABL2P42684 1182 aa9.69□□□□□ -0.86
FCF1-207ENST00000554973 PSEN2P49810 448 aa9.69□□□□□ -0.86
FCF1-207ENST00000554973 METTL3Q86U44 580 aaKnown RBP9.69□□□□□ -0.86
FCF1-207ENST00000554973 ANO8Q9HCE9 1232 aaPredicted RBP9.69□□□□□ -0.86
FCF1-207ENST00000554973 CSB-PGBD3P0DP91 1061 aa9.68□□□□□ -0.86
FCF1-207ENST00000554973 FBXO31Q5XUX0 539 aaPredicted RBP9.68□□□□□ -0.86
FCF1-207ENST00000554973 STAC3Q96MF2 364 aa9.68□□□□□ -0.86
FCF1-207ENST00000554973 POM121CA8CG34 1229 aa9.67□□□□□ -0.86
FCF1-207ENST00000554973 TUSC1Q2TAM9 212 aa9.67□□□□□ -0.86
FCF1-207ENST00000554973 DMRTA1Q5VZB9 504 aa9.67□□□□□ -0.86
FCF1-207ENST00000554973 KCNK17Q96T54 332 aa9.67□□□□□ -0.86
FCF1-207ENST00000554973 MAP3K7O43318 606 aa9.66□□□□□ -0.86
FCF1-207ENST00000554973 PHF14O94880 888 aa9.66□□□□□ -0.86
FCF1-207ENST00000554973 LIMD1Q9UGP4 676 aa9.66□□□□□ -0.86
FCF1-207ENST00000554973 CCDC27Q2M243 656 aa9.65□□□□□ -0.86
FCF1-207ENST00000554973 RIC3Q7Z5B4 369 aa9.65□□□□□ -0.86
FCF1-207ENST00000554973 FOSBP53539 338 aa9.64□□□□□ -0.87
FCF1-207ENST00000554973 SRPK2P78362 688 aaKnown RBP9.64□□□□□ -0.87
FCF1-207ENST00000554973 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
FCF1-207ENST00000554973 BCL2L12Q9HB09 334 aa9.64□□□□□ -0.87
FCF1-207ENST00000554973 PTPREP23469 700 aa9.63□□□□□ -0.87
FCF1-207ENST00000554973 JPH4Q96JJ6 628 aa9.63□□□□□ -0.87
FCF1-207ENST00000554973 HRO43593 1189 aa9.62□□□□□ -0.87
FCF1-207ENST00000554973 HDGFL1Q5TGJ6 251 aa9.62□□□□□ -0.87
FCF1-207ENST00000554973 NLRP7Q8WX94 980 aa9.62□□□□□ -0.87
FCF1-207ENST00000554973 TBC1D2BQ9UPU7 963 aa9.62□□□□□ -0.87
FCF1-207ENST00000554973 SPTLC1O15269 473 aa9.61□□□□□ -0.87
FCF1-207ENST00000554973 FAM161AQ3B820 660 aa9.61□□□□□ -0.87
FCF1-207ENST00000554973 SND1Q7KZF4 910 aaKnown RBP eCLIP9.61□□□□□ -0.87
FCF1-207ENST00000554973 HCSTQ9UBK5 93 aa9.61□□□□□ -0.87
FCF1-207ENST00000554973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
FCF1-207ENST00000554973 RFX1P22670 979 aa9.6□□□□□ -0.87
FCF1-207ENST00000554973 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
FCF1-207ENST00000554973 SPIRE2Q8WWL2 714 aa9.6□□□□□ -0.87
FCF1-207ENST00000554973 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
FCF1-207ENST00000554973 ADGRG1Q9Y653 693 aa9.6□□□□□ -0.87
FCF1-207ENST00000554973 HMGB1P09429 215 aaKnown RBP9.59□□□□□ -0.87
FCF1-207ENST00000554973 CERKQ8TCT0 537 aa9.59□□□□□ -0.87
FCF1-207ENST00000554973 RBM33Q96EV2 1170 aaKnown RBP9.59□□□□□ -0.87
FCF1-207ENST00000554973 IVNS1ABPQ9Y6Y0 642 aa9.59□□□□□ -0.87
FCF1-207ENST00000554973 WASHC4Q2M389 1173 aa9.58□□□□□ -0.88
FCF1-207ENST00000554973 TSR1Q2NL82 804 aaKnown RBP9.58□□□□□ -0.88
FCF1-207ENST00000554973 SLC4A5Q9BY07 1137 aa9.58□□□□□ -0.88
FCF1-207ENST00000554973 VPS9D1Q9Y2B5 631 aa9.58□□□□□ -0.88
FCF1-207ENST00000554973 GJA5P36382 358 aa9.57□□□□□ -0.88
FCF1-207ENST00000554973 TYW1BQ6NUM6 668 aa9.57□□□□□ -0.88
FCF1-207ENST00000554973 AP1G2O75843 785 aa9.56□□□□□ -0.88
FCF1-207ENST00000554973 ADAMTS19Q8TE59 1207 aa9.56□□□□□ -0.88
FCF1-207ENST00000554973 KCTD12Q96CX2 325 aaKnown RBP9.56□□□□□ -0.88
FCF1-207ENST00000554973 PPP1R12CQ9BZL4 782 aa9.56□□□□□ -0.88
FCF1-207ENST00000554973 VRTNQ9H8Y1 702 aa9.56□□□□□ -0.88
FCF1-207ENST00000554973 PCDHGA10Q9Y5H3 936 aa9.56□□□□□ -0.88
FCF1-207ENST00000554973 LILRB3O75022 631 aa9.55□□□□□ -0.88
FCF1-207ENST00000554973 RSBN1LQ6PCB5 846 aaPredicted RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms