RNA–Protein interactions for RNA: ENST00000554684.5

PPP4R3A-205, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R3A, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-205ENST00000554684 NLRP6P59044 892 aa20.88■□□□□ 0.93
PPP4R3A-205ENST00000554684 UPF2Q9HAU5 1272 aaKnown RBP20.88■□□□□ 0.93
PPP4R3A-205ENST00000554684 POGZQ7Z3K3 1410 aa20.87■□□□□ 0.93
PPP4R3A-205ENST00000554684 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
PPP4R3A-205ENST00000554684 USP35Q9P2H5 1018 aa20.86■□□□□ 0.93
PPP4R3A-205ENST00000554684 ERCC6L2Q5T890 1561 aa20.86■□□□□ 0.93
PPP4R3A-205ENST00000554684 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
PPP4R3A-205ENST00000554684 CDK19Q9BWU1 502 aa20.85■□□□□ 0.93
PPP4R3A-205ENST00000554684 CFAP43Q8NDM7 1665 aa20.85■□□□□ 0.93
PPP4R3A-205ENST00000554684 HMOX1P09601 288 aa20.85■□□□□ 0.93
PPP4R3A-205ENST00000554684 HSPA2P54652 639 aa20.85■□□□□ 0.93
PPP4R3A-205ENST00000554684 APAF1O14727 1248 aa20.84■□□□□ 0.93
PPP4R3A-205ENST00000554684 CLUAP1Q96AJ1 413 aa20.83■□□□□ 0.93
PPP4R3A-205ENST00000554684 NBR1Q14596 966 aa20.83■□□□□ 0.93
PPP4R3A-205ENST00000554684 BCL2L13Q9BXK5 485 aa20.83■□□□□ 0.93
PPP4R3A-205ENST00000554684 RPRD2Q5VT52 1461 aaKnown RBP20.82■□□□□ 0.92
PPP4R3A-205ENST00000554684 PNNQ9H307 717 aaKnown RBP20.81■□□□□ 0.92
PPP4R3A-205ENST00000554684 ABTB2Q8N961 1025 aa20.8■□□□□ 0.92
PPP4R3A-205ENST00000554684 TCERG1O14776 1098 aaKnown RBP20.8■□□□□ 0.92
PPP4R3A-205ENST00000554684 PLIN1O60240 522 aa20.8■□□□□ 0.92
PPP4R3A-205ENST00000554684 MYH16Q9H6N6 1097 aa20.8■□□□□ 0.92
PPP4R3A-205ENST00000554684 MTHFSP49914 203 aa20.79■□□□□ 0.92
PPP4R3A-205ENST00000554684 MAGI3Q5TCQ9 1506 aa20.79■□□□□ 0.92
PPP4R3A-205ENST00000554684 SAMD9Q5K651 1589 aa20.79■□□□□ 0.92
PPP4R3A-205ENST00000554684 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
PPP4R3A-205ENST00000554684 EVA1CP58658 441 aa20.78■□□□□ 0.92
PPP4R3A-205ENST00000554684 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
PPP4R3A-205ENST00000554684 NPHP1O15259 732 aa20.77■□□□□ 0.92
PPP4R3A-205ENST00000554684 KDM5BQ9UGL1 1544 aa20.77■□□□□ 0.91
PPP4R3A-205ENST00000554684 RBM19Q9Y4C8 960 aaKnown RBP20.76■□□□□ 0.91
PPP4R3A-205ENST00000554684 A2MP01023 1474 aa20.76■□□□□ 0.91
PPP4R3A-205ENST00000554684 TCOF1Q13428 1488 aaKnown RBP20.76■□□□□ 0.91
PPP4R3A-205ENST00000554684 APBB1O00213 710 aa20.76■□□□□ 0.91
PPP4R3A-205ENST00000554684 AMOTL2Q9Y2J4 779 aa20.75■□□□□ 0.91
PPP4R3A-205ENST00000554684 ERICH6BQ5W0A0 696 aa20.74■□□□□ 0.91
PPP4R3A-205ENST00000554684 TSHZ2Q9NRE2 1034 aa20.74■□□□□ 0.91
PPP4R3A-205ENST00000554684 HSP90AA1P07900 732 aaKnown RBP20.74■□□□□ 0.91
PPP4R3A-205ENST00000554684 ADAMTS8Q9UP79 889 aa20.74■□□□□ 0.91
PPP4R3A-205ENST00000554684 ZNF518AQ6AHZ1 1483 aa20.73■□□□□ 0.91
PPP4R3A-205ENST00000554684 CHD1O14646 1710 aa20.73■□□□□ 0.91
PPP4R3A-205ENST00000554684 NOS1P29475 1434 aa20.73■□□□□ 0.91
PPP4R3A-205ENST00000554684 DIAPH1O60610 1272 aaKnown RBP20.72■□□□□ 0.91
PPP4R3A-205ENST00000554684 NECTIN2Q92692 538 aa20.72■□□□□ 0.91
PPP4R3A-205ENST00000554684 FOXO3O43524 673 aa20.71■□□□□ 0.91
PPP4R3A-205ENST00000554684 NLRP2Q9NX02 1062 aa20.7■□□□□ 0.9
PPP4R3A-205ENST00000554684 PNISRQ8TF01 805 aaKnown RBP20.69■□□□□ 0.9
PPP4R3A-205ENST00000554684 RRS1Q15050 365 aaKnown RBP20.69■□□□□ 0.9
PPP4R3A-205ENST00000554684 SYTL4Q96C24 671 aaPredicted RBP20.69■□□□□ 0.9
PPP4R3A-205ENST00000554684 CDCA7LQ96GN5 454 aa20.69■□□□□ 0.9
PPP4R3A-205ENST00000554684 NUTM2BA6NNL0 878 aaPredicted RBP20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 NUTM2EB1AL46 878 aaPredicted RBP20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 NUTM2AQ8IVF1 878 aaPredicted RBP20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 CFAP65Q6ZU64 1925 aaKnown RBP20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 RPGRIP1LQ68CZ1 1315 aa20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 FBLN1P23142 703 aa20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 NUDT16Q96DE0 195 aaKnown RBP20.68■□□□□ 0.9
PPP4R3A-205ENST00000554684 BRD4O60885 1362 aaPredicted RBP20.67■□□□□ 0.9
PPP4R3A-205ENST00000554684 SLC4A10Q6U841 1118 aa20.67■□□□□ 0.9
PPP4R3A-205ENST00000554684 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
PPP4R3A-205ENST00000554684 ZC3H6P61129 1189 aaKnown RBP20.66■□□□□ 0.9
PPP4R3A-205ENST00000554684 RTEL1-TNFRSF6BF6WH68 1400 aa20.66■□□□□ 0.9
PPP4R3A-205ENST00000554684 SMC4Q9NTJ3 1288 aa20.66■□□□□ 0.9
PPP4R3A-205ENST00000554684 NGEFQ8N5V2 710 aa20.65■□□□□ 0.9
PPP4R3A-205ENST00000554684 STRN4Q9NRL3 753 aa20.65■□□□□ 0.9
PPP4R3A-205ENST00000554684 RRP1P56182 461 aaKnown RBP20.64■□□□□ 0.9
PPP4R3A-205ENST00000554684 CCDC61Q9Y6R9 512 aa20.64■□□□□ 0.89
PPP4R3A-205ENST00000554684 RIPK4P57078 832 aa20.63■□□□□ 0.89
PPP4R3A-205ENST00000554684 ABCC10Q5T3U5 1492 aa20.63■□□□□ 0.89
PPP4R3A-205ENST00000554684 MS4A1P11836 297 aa20.63■□□□□ 0.89
PPP4R3A-205ENST00000554684 TNRQ92752 1358 aa20.63■□□□□ 0.89
PPP4R3A-205ENST00000554684 ANP32EQ9BTT0 268 aa20.62■□□□□ 0.89
PPP4R3A-205ENST00000554684 ITSN2Q9NZM3 1697 aa20.61■□□□□ 0.89
PPP4R3A-205ENST00000554684 YEATS2Q9ULM3 1422 aa20.61■□□□□ 0.89
PPP4R3A-205ENST00000554684 ITPRIPQ8IWB1 547 aa20.61■□□□□ 0.89
PPP4R3A-205ENST00000554684 OS9Q13438 667 aaPredicted RBP20.6■□□□□ 0.89
PPP4R3A-205ENST00000554684 ZMYM3Q14202 1370 aa20.6■□□□□ 0.89
PPP4R3A-205ENST00000554684 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
PPP4R3A-205ENST00000554684 GPRASP1Q5JY77 1395 aa20.59■□□□□ 0.89
PPP4R3A-205ENST00000554684 TEFQ10587 303 aa20.59■□□□□ 0.89
PPP4R3A-205ENST00000554684 CRBNQ96SW2 442 aa20.58■□□□□ 0.89
PPP4R3A-205ENST00000554684 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.88
PPP4R3A-205ENST00000554684 E9PSI1 815 aa20.58■□□□□ 0.88
PPP4R3A-205ENST00000554684 NME9Q86XW9 330 aa20.58■□□□□ 0.88
PPP4R3A-205ENST00000554684 C1orf141Q5JVX7 400 aa20.57■□□□□ 0.88
PPP4R3A-205ENST00000554684 MEX3CQ5U5Q3 659 aaKnown RBP20.57■□□□□ 0.88
PPP4R3A-205ENST00000554684 NCKAP5LQ9HCH0 1330 aa20.56■□□□□ 0.88
PPP4R3A-205ENST00000554684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.56■□□□□ 0.881e-11■■■□□ 16.7
PPP4R3A-205ENST00000554684 ZNF428Q96B54 188 aa20.56■□□□□ 0.88
PPP4R3A-205ENST00000554684 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
PPP4R3A-205ENST00000554684 DUOX2Q9NRD8 1548 aa20.55■□□□□ 0.88
PPP4R3A-205ENST00000554684 IPO8O15397 1037 aaKnown RBP20.55■□□□□ 0.88
PPP4R3A-205ENST00000554684 PZPP20742 1482 aa20.55■□□□□ 0.88
PPP4R3A-205ENST00000554684 PRKAR2BP31323 418 aa20.55■□□□□ 0.88
PPP4R3A-205ENST00000554684 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
PPP4R3A-205ENST00000554684 SULT6B1Q6IMI4 303 aa20.54■□□□□ 0.88
PPP4R3A-205ENST00000554684 TCP11L2Q8N4U5 519 aa20.54■□□□□ 0.88
PPP4R3A-205ENST00000554684 CALD1Q05682 793 aaKnown RBP20.54■□□□□ 0.88
PPP4R3A-205ENST00000554684 RAPGEF4Q8WZA2 1011 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms