RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 NOP58Q9Y2X3 529 aaKnown RBP20.75■□□□□ 0.91
ARHGEF40-203ENST00000554514 CCDC146Q8IYE0 955 aa20.74■□□□□ 0.91
ARHGEF40-203ENST00000554514 CRBNQ96SW2 442 aa20.74■□□□□ 0.91
ARHGEF40-203ENST00000554514 ADGRF5Q8IZF2 1346 aa20.74■□□□□ 0.91
ARHGEF40-203ENST00000554514 SKAP1Q86WV1 359 aa20.74■□□□□ 0.91
ARHGEF40-203ENST00000554514 PTPRTO14522 1441 aa20.73■□□□□ 0.91
ARHGEF40-203ENST00000554514 CEP152O94986 1710 aa20.73■□□□□ 0.91
ARHGEF40-203ENST00000554514 IQGAP1P46940 1657 aa20.72■□□□□ 0.91
ARHGEF40-203ENST00000554514 NBR1Q14596 966 aa20.71■□□□□ 0.91
ARHGEF40-203ENST00000554514 C20orf194Q5TEA3 1177 aa20.71■□□□□ 0.91
ARHGEF40-203ENST00000554514 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
ARHGEF40-203ENST00000554514 TET3O43151 1660 aa20.69■□□□□ 0.9
ARHGEF40-203ENST00000554514 PLEKHH1Q9ULM0 1364 aa20.69■□□□□ 0.9
ARHGEF40-203ENST00000554514 ZMYM4Q5VZL5 1548 aa20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 DEPDC5O75140 1603 aa20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 ASXL2Q76L83 1435 aa20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 GGT6Q6P531 493 aa20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 ARAP3Q8WWN8 1544 aa20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
ARHGEF40-203ENST00000554514 INO80Q9ULG1 1556 aaPredicted RBP20.66■□□□□ 0.9
ARHGEF40-203ENST00000554514 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
ARHGEF40-203ENST00000554514 ABCA9Q8IUA7 1624 aa20.65■□□□□ 0.9
ARHGEF40-203ENST00000554514 STAC3Q96MF2 364 aa20.65■□□□□ 0.9
ARHGEF40-203ENST00000554514 IPO9Q96P70 1041 aaKnown RBP20.65■□□□□ 0.9
ARHGEF40-203ENST00000554514 SYNMO15061 1565 aa20.64■□□□□ 0.9
ARHGEF40-203ENST00000554514 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF40-203ENST00000554514 GOLGA2Q08379 1002 aa20.63■□□□□ 0.89
ARHGEF40-203ENST00000554514 TRAK1Q9UPV9 953 aa20.63■□□□□ 0.89
ARHGEF40-203ENST00000554514 CFAP65Q6ZU64 1925 aaKnown RBP20.63■□□□□ 0.89
ARHGEF40-203ENST00000554514 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
ARHGEF40-203ENST00000554514 TCERG1O14776 1098 aaKnown RBP20.62■□□□□ 0.89
ARHGEF40-203ENST00000554514 DUSP27Q5VZP5 1158 aa20.62■□□□□ 0.89
ARHGEF40-203ENST00000554514 APAF1O14727 1248 aa20.62■□□□□ 0.89
ARHGEF40-203ENST00000554514 PDE4AP27815 886 aa20.62■□□□□ 0.89
ARHGEF40-203ENST00000554514 NUTM2DQ5VT03 806 aaPredicted RBP20.62■□□□□ 0.89
ARHGEF40-203ENST00000554514 NPM1P06748 294 aaKnown RBP eCLIP20.61■□□□□ 0.89
ARHGEF40-203ENST00000554514 CARD14Q9BXL6 1004 aa20.61■□□□□ 0.89
ARHGEF40-203ENST00000554514 INSRP06213 1382 aa20.61■□□□□ 0.89
ARHGEF40-203ENST00000554514 VWDEQ8N2E2 1590 aa20.6■□□□□ 0.89
ARHGEF40-203ENST00000554514 MYOM1P52179 1685 aa20.6■□□□□ 0.89
ARHGEF40-203ENST00000554514 TMEM132EQ6IEE7 984 aa20.6■□□□□ 0.89
ARHGEF40-203ENST00000554514 ABCA6Q8N139 1617 aa20.59■□□□□ 0.89
ARHGEF40-203ENST00000554514 MROH1Q8NDA8 1641 aa20.59■□□□□ 0.89
ARHGEF40-203ENST00000554514 NOS1P29475 1434 aa20.59■□□□□ 0.89
ARHGEF40-203ENST00000554514 KDM5AP29375 1690 aaKnown RBP20.59■□□□□ 0.89
ARHGEF40-203ENST00000554514 ERVK-7P63135 1459 aa20.58■□□□□ 0.89
ARHGEF40-203ENST00000554514 MAP3K4Q9Y6R4 1608 aa20.58■□□□□ 0.88
ARHGEF40-203ENST00000554514 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF40-203ENST00000554514 KIF1BO60333 1816 aa20.56■□□□□ 0.88
ARHGEF40-203ENST00000554514 PIK3C2GO75747 1445 aa20.56■□□□□ 0.88
ARHGEF40-203ENST00000554514 MROH2AA6NES4 1674 aa20.55■□□□□ 0.88
ARHGEF40-203ENST00000554514 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
ARHGEF40-203ENST00000554514 EFCAB6Q5THR3 1501 aa20.55■□□□□ 0.88
ARHGEF40-203ENST00000554514 KIDINS220Q9ULH0 1771 aa20.55■□□□□ 0.88
ARHGEF40-203ENST00000554514 CENPJQ9HC77 1338 aaPredicted RBP20.55■□□□□ 0.88
ARHGEF40-203ENST00000554514 ZNF521Q96K83 1311 aa20.54■□□□□ 0.88
ARHGEF40-203ENST00000554514 BACH2Q9BYV9 841 aa20.54■□□□□ 0.88
ARHGEF40-203ENST00000554514 SLFN5Q08AF3 891 aa20.54■□□□□ 0.88
ARHGEF40-203ENST00000554514 NEUROD2Q15784 382 aa20.54■□□□□ 0.88
ARHGEF40-203ENST00000554514 SLC12A5Q9H2X9 1139 aa20.53■□□□□ 0.88
ARHGEF40-203ENST00000554514 MYOM2P54296 1465 aa20.53■□□□□ 0.88
ARHGEF40-203ENST00000554514 DMRT2Q9Y5R5 561 aa20.52■□□□□ 0.88
ARHGEF40-203ENST00000554514 ZNF518AQ6AHZ1 1483 aa20.52■□□□□ 0.88
ARHGEF40-203ENST00000554514 KIAA1210Q9ULL0 1709 aa20.51■□□□□ 0.87
ARHGEF40-203ENST00000554514 BCAR3O75815 825 aa20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 MORC1Q86VD1 984 aa20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 CD109Q6YHK3 1445 aa20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 NPC1L1Q9UHC9 1359 aa20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 RAPGEF3O95398 923 aa20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
ARHGEF40-203ENST00000554514 RRP7AQ9Y3A4 280 aaKnown RBP20.49■□□□□ 0.87
ARHGEF40-203ENST00000554514 MS4A1P11836 297 aa20.49■□□□□ 0.87
ARHGEF40-203ENST00000554514 NPATQ14207 1427 aa20.48■□□□□ 0.87
ARHGEF40-203ENST00000554514 NSD3Q9BZ95 1437 aa20.48■□□□□ 0.87
ARHGEF40-203ENST00000554514 SLC24A1O60721 1099 aa20.47■□□□□ 0.87
ARHGEF40-203ENST00000554514 DEKP35659 375 aaKnown RBP20.47■□□□□ 0.87
ARHGEF40-203ENST00000554514 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
ARHGEF40-203ENST00000554514 RGS3P49796 1198 aa20.45■□□□□ 0.86
ARHGEF40-203ENST00000554514 C14orf93Q9H972 538 aaKnown RBP20.44■□□□□ 0.86
ARHGEF40-203ENST00000554514 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
ARHGEF40-203ENST00000554514 OSCARQ8IYS5 282 aa20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 E9PSI1 815 aa20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 POGZQ7Z3K3 1410 aa20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 ADGRB3O60242 1522 aa20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 CANXP27824 592 aaKnown RBP20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 RTL5Q5HYW3 569 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
ARHGEF40-203ENST00000554514 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
ARHGEF40-203ENST00000554514 NEURL4Q96JN8 1562 aa20.41■□□□□ 0.86
ARHGEF40-203ENST00000554514 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
ARHGEF40-203ENST00000554514 STK26Q9P289 416 aa20.41■□□□□ 0.86
ARHGEF40-203ENST00000554514 NRXN1Q9ULB1 1477 aa20.41■□□□□ 0.86
ARHGEF40-203ENST00000554514 FRMPD1Q5SYB0 1578 aa20.4■□□□□ 0.86
ARHGEF40-203ENST00000554514 WWC1Q8IX03 1113 aa20.4■□□□□ 0.86
ARHGEF40-203ENST00000554514 LMTK2Q8IWU2 1503 aa20.39■□□□□ 0.86
ARHGEF40-203ENST00000554514 FRAT1Q92837 279 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF40-203ENST00000554514 CABP2Q9NPB3 220 aa20.39■□□□□ 0.85
ARHGEF40-203ENST00000554514 MTHFSP49914 203 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms