RNA–Protein interactions for RNA: ENST00000554417.1

HNRNPC-210, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-210ENST00000554417 KIDINS220Q9ULH0 1771 aa10.94□□□□□ -0.66
HNRNPC-210ENST00000554417 CROCC2H7BZ55 1655 aa10.93□□□□□ -0.66
HNRNPC-210ENST00000554417 RRP7BPQ9NSQ0 103 aa10.93□□□□□ -0.66
HNRNPC-210ENST00000554417 CHIC2Q9UKJ5 165 aa10.93□□□□□ -0.66
HNRNPC-210ENST00000554417 DIP2CQ9Y2E4 1556 aa10.93□□□□□ -0.66
HNRNPC-210ENST00000554417 FAM135AQ9P2D6 1515 aa10.92□□□□□ -0.66
HNRNPC-210ENST00000554417 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
HNRNPC-210ENST00000554417 KIF3BO15066 747 aa10.91□□□□□ -0.66
HNRNPC-210ENST00000554417 HRCP23327 699 aa10.91□□□□□ -0.66
HNRNPC-210ENST00000554417 MMRN1Q13201 1228 aa10.91□□□□□ -0.66
HNRNPC-210ENST00000554417 KANK1Q14678 1352 aa10.9□□□□□ -0.66
HNRNPC-210ENST00000554417 ABCA6Q8N139 1617 aa10.9□□□□□ -0.66
HNRNPC-210ENST00000554417 EIF2AK4Q9P2K8 1649 aaKnown RBP10.9□□□□□ -0.66
HNRNPC-210ENST00000554417 HFM1A2PYH4 1435 aa10.9□□□□□ -0.66
HNRNPC-210ENST00000554417 CNTLNQ9NXG0 1405 aa10.9□□□□□ -0.66
HNRNPC-210ENST00000554417 PTPRKQ15262 1439 aa10.88□□□□□ -0.67
HNRNPC-210ENST00000554417 GGT6Q6P531 493 aa10.88□□□□□ -0.67
HNRNPC-210ENST00000554417 SPNS2Q8IVW8 549 aa10.88□□□□□ -0.67
HNRNPC-210ENST00000554417 PCDHB13Q9Y5F0 798 aa10.87□□□□□ -0.67
HNRNPC-210ENST00000554417 BCORL1Q5H9F3 1711 aa10.87□□□□□ -0.67
HNRNPC-210ENST00000554417 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
HNRNPC-210ENST00000554417 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
HNRNPC-210ENST00000554417 TMEM121BQ9BXQ6 578 aaPredicted RBP10.86□□□□□ -0.67
HNRNPC-210ENST00000554417 NAIPQ13075 1403 aa10.85□□□□□ -0.67
HNRNPC-210ENST00000554417 SETD5Q9C0A6 1442 aa10.84□□□□□ -0.67
HNRNPC-210ENST00000554417 MLECQ14165 292 aa10.84□□□□□ -0.67
HNRNPC-210ENST00000554417 MIER1Q8N108 512 aa10.84□□□□□ -0.67
HNRNPC-210ENST00000554417 PLCG2P16885 1265 aa10.82□□□□□ -0.68
HNRNPC-210ENST00000554417 KDM5DQ9BY66 1539 aa10.82□□□□□ -0.68
HNRNPC-210ENST00000554417 RNF17Q9BXT8 1623 aaKnown RBP10.81□□□□□ -0.68
HNRNPC-210ENST00000554417 IRX5P78411 483 aaPredicted RBP10.81□□□□□ -0.68
HNRNPC-210ENST00000554417 IFNL1Q8IU54 200 aa10.81□□□□□ -0.68
HNRNPC-210ENST00000554417 NUP155O75694 1391 aa10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 PRDM15P57071 1507 aaPredicted RBP10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 ZC3H13Q5T200 1668 aaKnown RBP10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 GCC2Q8IWJ2 1684 aa10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 TRIM52Q96A61 297 aa10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 ARHGAP31Q2M1Z3 1444 aa10.8□□□□□ -0.68
HNRNPC-210ENST00000554417 ADAMTSL3P82987 1691 aa10.79□□□□□ -0.68
HNRNPC-210ENST00000554417 LMTK2Q8IWU2 1503 aa10.79□□□□□ -0.68
HNRNPC-210ENST00000554417 ZMYM3Q14202 1370 aa10.79□□□□□ -0.68
HNRNPC-210ENST00000554417 TMEM106CQ9BVX2 250 aa10.79□□□□□ -0.68
HNRNPC-210ENST00000554417 DEPDC5O75140 1603 aa10.79□□□□□ -0.68
HNRNPC-210ENST00000554417 NPATQ14207 1427 aa10.78□□□□□ -0.68
HNRNPC-210ENST00000554417 KDM4FA0A1W2PPD8 638 aa10.78□□□□□ -0.68
HNRNPC-210ENST00000554417 RPRD2Q5VT52 1461 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-210ENST00000554417 MROH2AA6NES4 1674 aa10.77□□□□□ -0.69
HNRNPC-210ENST00000554417 UNC13BO14795 1591 aa10.77□□□□□ -0.69
HNRNPC-210ENST00000554417 RAB3GAP2Q9H2M9 1393 aa10.77□□□□□ -0.69
HNRNPC-210ENST00000554417 PTPRMP28827 1452 aa10.76□□□□□ -0.69
HNRNPC-210ENST00000554417 NUBP1P53384 320 aa10.76□□□□□ -0.69
HNRNPC-210ENST00000554417 VWDEQ8N2E2 1590 aa10.76□□□□□ -0.69
HNRNPC-210ENST00000554417 PZPP20742 1482 aa10.75□□□□□ -0.69
HNRNPC-210ENST00000554417 ABCC3O15438 1527 aa10.75□□□□□ -0.69
HNRNPC-210ENST00000554417 SNPHO15079 494 aa10.75□□□□□ -0.69
HNRNPC-210ENST00000554417 SLC52A1Q9NWF4 448 aa10.75□□□□□ -0.69
HNRNPC-210ENST00000554417 FER1L4A9Z1Z3 1794 aa10.75□□□□□ -0.69
HNRNPC-210ENST00000554417 IQGAP3Q86VI3 1631 aa10.73□□□□□ -0.69
HNRNPC-210ENST00000554417 MADDQ8WXG6 1647 aa10.73□□□□□ -0.69
HNRNPC-210ENST00000554417 SIGLEC1Q9BZZ2 1709 aa10.73□□□□□ -0.69
HNRNPC-210ENST00000554417 MPHOSPH9Q99550 1183 aa10.73□□□□□ -0.69
HNRNPC-210ENST00000554417 MROH1Q8NDA8 1641 aa10.73□□□□□ -0.69
HNRNPC-210ENST00000554417 TET3O43151 1660 aa10.71□□□□□ -0.69
HNRNPC-210ENST00000554417 HDGFP51858 240 aaKnown RBP10.71□□□□□ -0.69
HNRNPC-210ENST00000554417 MARVELD3Q96A59 401 aa10.71□□□□□ -0.69
HNRNPC-210ENST00000554417 PCGF6Q9BYE7 350 aa10.71□□□□□ -0.69
HNRNPC-210ENST00000554417 OCEL1Q9H607 264 aa10.71□□□□□ -0.69
HNRNPC-210ENST00000554417 CLTCQ00610 1675 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 RIMS1Q86UR5 1692 aaKnown RBP10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 EFCAB6Q5THR3 1501 aa10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 NLRP1Q9C000 1473 aa10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 TNRQ92752 1358 aa10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 PKD2Q13563 968 aa10.7□□□□□ -0.7
HNRNPC-210ENST00000554417 CAMSAP1Q5T5Y3 1602 aa10.69□□□□□ -0.7
HNRNPC-210ENST00000554417 UHRF1BP1Q6BDS2 1440 aa10.69□□□□□ -0.7
HNRNPC-210ENST00000554417 SETD1BQ9UPS6 1966 aaKnown RBP10.69□□□□□ -0.7
HNRNPC-210ENST00000554417 CEBPAP49715 358 aaPredicted RBP10.69□□□□□ -0.7
HNRNPC-210ENST00000554417 NOS1P29475 1434 aa10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 THEMISQ8N1K5 641 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 SPATA31D1Q6ZQQ2 1576 aa10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 ERVK-7P63135 1459 aa10.68□□□□□ -0.7
HNRNPC-210ENST00000554417 PTPRTO14522 1441 aa10.67□□□□□ -0.7
HNRNPC-210ENST00000554417 C3P01024 1663 aa10.66□□□□□ -0.7
HNRNPC-210ENST00000554417 FAM212AQ96EL1 285 aa10.66□□□□□ -0.7
HNRNPC-210ENST00000554417 STAC3Q96MF2 364 aa10.66□□□□□ -0.7
HNRNPC-210ENST00000554417 CLSPNQ9HAW4 1339 aa10.65□□□□□ -0.7
HNRNPC-210ENST00000554417 CEP152O94986 1710 aa10.65□□□□□ -0.7
HNRNPC-210ENST00000554417 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
HNRNPC-210ENST00000554417 A2ML1A8K2U0 1454 aa10.64□□□□□ -0.71
HNRNPC-210ENST00000554417 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
HNRNPC-210ENST00000554417 IDI1Q13907 227 aa10.63□□□□□ -0.71
HNRNPC-210ENST00000554417 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.63□□□□□ -0.71
HNRNPC-210ENST00000554417 RPGRIP1LQ68CZ1 1315 aa10.62□□□□□ -0.71
HNRNPC-210ENST00000554417 KRTAP3-3Q9BYR6 98 aa10.62□□□□□ -0.71
HNRNPC-210ENST00000554417 KRTAP3-2Q9BYR7 98 aa10.62□□□□□ -0.71
HNRNPC-210ENST00000554417 EID1Q9Y6B2 187 aa10.62□□□□□ -0.71
HNRNPC-210ENST00000554417 E9PCH4 1651 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms