RNA–Protein interactions for RNA: ENST00000554240.5

SKOR1-204, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-204ENST00000554240 RCAN3Q9UKA8 241 aa24.03■■□□□ 1.44
SKOR1-204ENST00000554240 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
SKOR1-204ENST00000554240 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
SKOR1-204ENST00000554240 ZNF518AQ6AHZ1 1483 aa24■■□□□ 1.43
SKOR1-204ENST00000554240 APAF1O14727 1248 aa24■■□□□ 1.43
SKOR1-204ENST00000554240 TRHP20396 242 aaPredicted RBP24■■□□□ 1.43
SKOR1-204ENST00000554240 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
SKOR1-204ENST00000554240 EIF3AQ14152 1382 aaKnown RBP23.99■■□□□ 1.43
SKOR1-204ENST00000554240 NPM2Q86SE8 214 aaKnown RBP23.98■■□□□ 1.43
SKOR1-204ENST00000554240 PLEKHG5O94827 1062 aa23.98■■□□□ 1.43
SKOR1-204ENST00000554240 NBR1Q14596 966 aa23.98■■□□□ 1.43
SKOR1-204ENST00000554240 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
SKOR1-204ENST00000554240 YEATS2Q9ULM3 1422 aa23.96■■□□□ 1.43
SKOR1-204ENST00000554240 PLXNC1O60486 1568 aa23.95■■□□□ 1.42
SKOR1-204ENST00000554240 U2SURPO15042 1029 aaKnown RBP23.95■■□□□ 1.42
SKOR1-204ENST00000554240 SKAP1Q86WV1 359 aa23.95■■□□□ 1.42
SKOR1-204ENST00000554240 CARD14Q9BXL6 1004 aa23.94■■□□□ 1.42
SKOR1-204ENST00000554240 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
SKOR1-204ENST00000554240 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.93■■□□□ 1.42
SKOR1-204ENST00000554240 UNC13BO14795 1591 aa23.93■■□□□ 1.42
SKOR1-204ENST00000554240 SOX12O15370 315 aa23.92■■□□□ 1.42
SKOR1-204ENST00000554240 AMER1Q5JTC6 1135 aaPredicted RBP23.92■■□□□ 1.42
SKOR1-204ENST00000554240 E9PCH4 1651 aa23.92■■□□□ 1.42
SKOR1-204ENST00000554240 GGNBP2Q9H3C7 697 aa23.92■■□□□ 1.42
SKOR1-204ENST00000554240 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
SKOR1-204ENST00000554240 NPATQ14207 1427 aa23.91■■□□□ 1.42
SKOR1-204ENST00000554240 PRAM1Q96QH2 718 aa23.9■■□□□ 1.42
SKOR1-204ENST00000554240 FBLN1P23142 703 aa23.9■■□□□ 1.42
SKOR1-204ENST00000554240 SCAF11Q99590 1463 aaKnown RBP23.9■■□□□ 1.42
SKOR1-204ENST00000554240 GPRASP1Q5JY77 1395 aa23.9■■□□□ 1.42
SKOR1-204ENST00000554240 COL17A1Q9UMD9 1497 aaPredicted RBP23.89■■□□□ 1.42
SKOR1-204ENST00000554240 PRDM15P57071 1507 aaPredicted RBP23.88■■□□□ 1.41
SKOR1-204ENST00000554240 POGZQ7Z3K3 1410 aa23.88■■□□□ 1.41
SKOR1-204ENST00000554240 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
SKOR1-204ENST00000554240 WAPLQ7Z5K2 1190 aa23.88■■□□□ 1.41
SKOR1-204ENST00000554240 PARD3Q8TEW0 1356 aa23.88■■□□□ 1.41
SKOR1-204ENST00000554240 CLTCL1P53675 1640 aa23.87■■□□□ 1.41
SKOR1-204ENST00000554240 TSPOAP1O95153 1857 aa23.86■■□□□ 1.41
SKOR1-204ENST00000554240 RRP1P56182 461 aaKnown RBP23.86■■□□□ 1.41
SKOR1-204ENST00000554240 U2AF1L5P0DN76 240 aaPredicted RBP23.86■■□□□ 1.41
SKOR1-204ENST00000554240 U2AF1Q01081 240 aaKnown RBP eCLIP23.86■■□□□ 1.41
SKOR1-204ENST00000554240 MAGI2Q86UL8 1455 aa23.86■■□□□ 1.41
SKOR1-204ENST00000554240 FRAT1Q92837 279 aaPredicted RBP23.85■■□□□ 1.41
SKOR1-204ENST00000554240 CEBPAP49715 358 aaPredicted RBP23.84■■□□□ 1.41
SKOR1-204ENST00000554240 MTHFSP49914 203 aa23.84■■□□□ 1.41
SKOR1-204ENST00000554240 C14orf93Q9H972 538 aaKnown RBP23.84■■□□□ 1.41
SKOR1-204ENST00000554240 BCL2L13Q9BXK5 485 aa23.84■■□□□ 1.41
SKOR1-204ENST00000554240 ABCA9Q8IUA7 1624 aa23.83■■□□□ 1.41
SKOR1-204ENST00000554240 C20orf194Q5TEA3 1177 aa23.81■■□□□ 1.4
SKOR1-204ENST00000554240 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
SKOR1-204ENST00000554240 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
SKOR1-204ENST00000554240 CRBNQ96SW2 442 aa23.8■■□□□ 1.4
SKOR1-204ENST00000554240 PTPRTO14522 1441 aa23.8■■□□□ 1.4
SKOR1-204ENST00000554240 EVC2Q86UK5 1308 aa23.8■■□□□ 1.4
SKOR1-204ENST00000554240 TXNDC2Q86VQ3 553 aa23.79■■□□□ 1.4
SKOR1-204ENST00000554240 STAC3Q96MF2 364 aa23.79■■□□□ 1.4
SKOR1-204ENST00000554240 TRPM2O94759 1503 aa23.78■■□□□ 1.4
SKOR1-204ENST00000554240 NSD3Q9BZ95 1437 aa23.78■■□□□ 1.4
SKOR1-204ENST00000554240 KIDINS220Q9ULH0 1771 aa23.77■■□□□ 1.4
SKOR1-204ENST00000554240 DEKP35659 375 aaKnown RBP23.75■■□□□ 1.39
SKOR1-204ENST00000554240 CABP1Q9NZU7 370 aa23.75■■□□□ 1.39
SKOR1-204ENST00000554240 LAS1LQ9Y4W2 734 aaKnown RBP23.75■■□□□ 1.39
SKOR1-204ENST00000554240 CEP152O94986 1710 aa23.74■■□□□ 1.39
SKOR1-204ENST00000554240 SPINK5Q9NQ38 1064 aaPredicted RBP23.74■■□□□ 1.39
SKOR1-204ENST00000554240 SLC52A1Q9NWF4 448 aa23.74■■□□□ 1.39
SKOR1-204ENST00000554240 CFAP53Q96M91 514 aa23.73■■□□□ 1.39
SKOR1-204ENST00000554240 SPHKAPQ2M3C7 1700 aa23.73■■□□□ 1.39
SKOR1-204ENST00000554240 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
SKOR1-204ENST00000554240 CLUAP1Q96AJ1 413 aa23.73■■□□□ 1.39
SKOR1-204ENST00000554240 NCKAP5LQ9HCH0 1330 aa23.72■■□□□ 1.39
SKOR1-204ENST00000554240 DMRT2Q9Y5R5 561 aa23.72■■□□□ 1.39
SKOR1-204ENST00000554240 EIF2AK4Q9P2K8 1649 aaKnown RBP23.72■■□□□ 1.39
SKOR1-204ENST00000554240 CGNL1Q0VF96 1302 aa23.72■■□□□ 1.39
SKOR1-204ENST00000554240 BCAR3O75815 825 aa23.72■■□□□ 1.39
SKOR1-204ENST00000554240 INO80Q9ULG1 1556 aaPredicted RBP23.71■■□□□ 1.39
SKOR1-204ENST00000554240 RGS3P49796 1198 aa23.71■■□□□ 1.39
SKOR1-204ENST00000554240 CDK19Q9BWU1 502 aa23.7■■□□□ 1.38
SKOR1-204ENST00000554240 SLC26A8Q96RN1 970 aa23.7■■□□□ 1.38
SKOR1-204ENST00000554240 PLEKHH1Q9ULM0 1364 aa23.69■■□□□ 1.38
SKOR1-204ENST00000554240 TET3O43151 1660 aa23.69■■□□□ 1.38
SKOR1-204ENST00000554240 PDE3BQ13370 1112 aa23.69■■□□□ 1.38
SKOR1-204ENST00000554240 ARAP3Q8WWN8 1544 aa23.68■■□□□ 1.38
SKOR1-204ENST00000554240 SLC24A1O60721 1099 aa23.67■■□□□ 1.38
SKOR1-204ENST00000554240 PPRC1Q5VV67 1664 aaKnown RBP23.67■■□□□ 1.38
SKOR1-204ENST00000554240 TCP11L2Q8N4U5 519 aa23.67■■□□□ 1.38
SKOR1-204ENST00000554240 MADDQ8WXG6 1647 aa23.67■■□□□ 1.38
SKOR1-204ENST00000554240 EFCAB6Q5THR3 1501 aa23.65■■□□□ 1.38
SKOR1-204ENST00000554240 POLR1AO95602 1720 aaPredicted RBP23.65■■□□□ 1.38
SKOR1-204ENST00000554240 MLH3Q9UHC1 1453 aa23.65■■□□□ 1.38
SKOR1-204ENST00000554240 ERICH6BQ5W0A0 696 aa23.65■■□□□ 1.38
SKOR1-204ENST00000554240 HDGFL2Q7Z4V5 671 aaPredicted RBP23.64■■□□□ 1.37
SKOR1-204ENST00000554240 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
SKOR1-204ENST00000554240 ERVK-7P63135 1459 aa23.63■■□□□ 1.37
SKOR1-204ENST00000554240 RPGRIP1LQ68CZ1 1315 aa23.63■■□□□ 1.37
SKOR1-204ENST00000554240 HECW2Q9P2P5 1572 aa23.63■■□□□ 1.37
SKOR1-204ENST00000554240 TERF2IPQ9NYB0 399 aa23.63■■□□□ 1.37
SKOR1-204ENST00000554240 RNF17Q9BXT8 1623 aaKnown RBP23.63■■□□□ 1.37
SKOR1-204ENST00000554240 PAK3O75914 559 aaPredicted RBP23.62■■□□□ 1.37
SKOR1-204ENST00000554240 HMOX1P09601 288 aa23.62■■□□□ 1.37
SKOR1-204ENST00000554240 RTN4Q9NQC3 1192 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms