RNA–Protein interactions for RNA: ENST00000554064.5

FCF1-205, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-205ENST00000554064 IFFO2Q5TF58 517 aa9.49□□□□□ -0.89
FCF1-205ENST00000554064 LMOD2Q6P5Q4 547 aa9.48□□□□□ -0.89
FCF1-205ENST00000554064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.48□□□□□ -0.89
FCF1-205ENST00000554064 KCNC4Q03721 635 aa9.47□□□□□ -0.89
FCF1-205ENST00000554064 A0A0G2JS52 829 aa9.45□□□□□ -0.9
FCF1-205ENST00000554064 MAP2K5Q13163 448 aa9.45□□□□□ -0.9
FCF1-205ENST00000554064 NLRP7Q8WX94 980 aa9.45□□□□□ -0.9
FCF1-205ENST00000554064 MTRQ99707 1265 aa9.45□□□□□ -0.9
FCF1-205ENST00000554064 PRR14Q9BWN1 585 aa9.44□□□□□ -0.9
FCF1-205ENST00000554064 CFHP08603 1231 aa9.43□□□□□ -0.9
FCF1-205ENST00000554064 TJAP1Q5JTD0 557 aa9.43□□□□□ -0.9
FCF1-205ENST00000554064 IL21Q9HBE4 155 aa9.43□□□□□ -0.9
FCF1-205ENST00000554064 SLC24A1O60721 1099 aa9.42□□□□□ -0.9
FCF1-205ENST00000554064 COPS2P61201 443 aa9.42□□□□□ -0.9
FCF1-205ENST00000554064 KMT5BQ4FZB7 885 aa9.42□□□□□ -0.9
FCF1-205ENST00000554064 SLC10A3P09131 477 aa9.41□□□□□ -0.9
FCF1-205ENST00000554064 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
FCF1-205ENST00000554064 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
FCF1-205ENST00000554064 PCDHB3Q9Y5E6 796 aa9.41□□□□□ -0.9
FCF1-205ENST00000554064 RDH13Q8NBN7 331 aa9.4□□□□□ -0.9
FCF1-205ENST00000554064 MINK1Q8N4C8 1332 aaPredicted RBP9.39□□□□□ -0.91
FCF1-205ENST00000554064 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
FCF1-205ENST00000554064 IRF6O14896 467 aa9.39□□□□□ -0.91
FCF1-205ENST00000554064 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
FCF1-205ENST00000554064 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
FCF1-205ENST00000554064 ZNF516Q92618 1163 aa9.38□□□□□ -0.91
FCF1-205ENST00000554064 ACTN4O43707 911 aaKnown RBP9.37□□□□□ -0.91
FCF1-205ENST00000554064 BLOC1S3Q6QNY0 202 aa9.37□□□□□ -0.91
FCF1-205ENST00000554064 SULF1Q8IWU6 871 aa9.36□□□□□ -0.91
FCF1-205ENST00000554064 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
FCF1-205ENST00000554064 ZC3H15Q8WU90 426 aaKnown RBP9.35□□□□□ -0.91
FCF1-205ENST00000554064 ZPR1O75312 459 aa9.34□□□□□ -0.91
FCF1-205ENST00000554064 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
FCF1-205ENST00000554064 NKX2-3Q8TAU0 364 aa9.33□□□□□ -0.92
FCF1-205ENST00000554064 RGS20O76081 388 aa9.32□□□□□ -0.92
FCF1-205ENST00000554064 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
FCF1-205ENST00000554064 TLL1O43897 1013 aa9.31□□□□□ -0.92
FCF1-205ENST00000554064 ZMYND10O75800 440 aa9.31□□□□□ -0.92
FCF1-205ENST00000554064 PUS10Q3MIT2 529 aaKnown RBP9.31□□□□□ -0.92
FCF1-205ENST00000554064 NR1I2O75469 434 aa9.3□□□□□ -0.92
FCF1-205ENST00000554064 PPP1R18Q6NYC8 613 aa9.29□□□□□ -0.92
FCF1-205ENST00000554064 CLCN1P35523 988 aa9.28□□□□□ -0.92
FCF1-205ENST00000554064 GCGRP47871 477 aa9.28□□□□□ -0.92
FCF1-205ENST00000554064 FUT2Q10981 343 aa9.28□□□□□ -0.92
FCF1-205ENST00000554064 GPCPD1Q9NPB8 672 aa9.28□□□□□ -0.92
FCF1-205ENST00000554064 GGCXP38435 758 aa9.27□□□□□ -0.93
FCF1-205ENST00000554064 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.27□□□□□ -0.93
FCF1-205ENST00000554064 CD46P15529 392 aa9.26□□□□□ -0.93
FCF1-205ENST00000554064 BCANQ96GW7 911 aa9.26□□□□□ -0.93
FCF1-205ENST00000554064 ADH1BP00325 375 aa9.25□□□□□ -0.93
FCF1-205ENST00000554064 ATP6V1AP38606 617 aa9.24□□□□□ -0.93
FCF1-205ENST00000554064 TTLL12Q14166 644 aaPredicted RBP9.24□□□□□ -0.93
FCF1-205ENST00000554064 MORN1Q5T089 497 aa9.24□□□□□ -0.93
FCF1-205ENST00000554064 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
FCF1-205ENST00000554064 FAM217BQ9NTX9 383 aaPredicted RBP9.23□□□□□ -0.93
FCF1-205ENST00000554064 S1PR4O95977 384 aa9.22□□□□□ -0.93
FCF1-205ENST00000554064 GRIPAP1Q4V328 841 aa9.22□□□□□ -0.93
FCF1-205ENST00000554064 KDM4AO75164 1064 aa9.21□□□□□ -0.94
FCF1-205ENST00000554064 AMHR2Q16671 573 aa9.21□□□□□ -0.94
FCF1-205ENST00000554064 TMUB1Q9BVT8 246 aa9.21□□□□□ -0.94
FCF1-205ENST00000554064 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.94
FCF1-205ENST00000554064 PRKD2Q9BZL6 878 aa9.21□□□□□ -0.94
FCF1-205ENST00000554064 SLC27A5Q9Y2P5 690 aa9.21□□□□□ -0.94
FCF1-205ENST00000554064 SPSB2Q99619 263 aa9.2□□□□□ -0.94
FCF1-205ENST00000554064 SLC6A16Q9GZN6 736 aa9.2□□□□□ -0.94
FCF1-205ENST00000554064 RNF223E7ERA6 249 aa9.19□□□□□ -0.94
FCF1-205ENST00000554064 AK7Q96M32 723 aa9.19□□□□□ -0.94
FCF1-205ENST00000554064 FMNL1O95466 1100 aaPredicted RBP9.18□□□□□ -0.94
FCF1-205ENST00000554064 GIGYF2Q6Y7W6 1299 aaKnown RBP9.18□□□□□ -0.94
FCF1-205ENST00000554064 IRX2Q9BZI1 471 aaPredicted RBP9.18□□□□□ -0.94
FCF1-205ENST00000554064 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
FCF1-205ENST00000554064 TRIM66O15016 1216 aa9.17□□□□□ -0.94
FCF1-205ENST00000554064 SSTR3P32745 418 aaPredicted RBP9.17□□□□□ -0.94
FCF1-205ENST00000554064 USP46P62068 366 aa9.17□□□□□ -0.94
FCF1-205ENST00000554064 NUTM1Q86Y26 1132 aa9.17□□□□□ -0.94
FCF1-205ENST00000554064 HOXA2O43364 376 aa9.16□□□□□ -0.94
FCF1-205ENST00000554064 ANKLE1Q8NAG6 615 aa9.16□□□□□ -0.94
FCF1-205ENST00000554064 THAP11Q96EK4 314 aa9.16□□□□□ -0.94
FCF1-205ENST00000554064 SLC24A3Q9HC58 644 aa9.16□□□□□ -0.94
FCF1-205ENST00000554064 RNF19BQ6ZMZ0 732 aa9.15□□□□□ -0.94
FCF1-205ENST00000554064 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.94
FCF1-205ENST00000554064 HLA-CQ95604 372 aa9.15□□□□□ -0.94
FCF1-205ENST00000554064 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.94
FCF1-205ENST00000554064 Q3C1V9 767 aa9.14□□□□□ -0.95
FCF1-205ENST00000554064 BRICD5Q6PL45 260 aa9.14□□□□□ -0.95
FCF1-205ENST00000554064 GUCA2AQ02747 115 aa9.13□□□□□ -0.95
FCF1-205ENST00000554064 PRDM9Q9NQV7 894 aa9.13□□□□□ -0.95
FCF1-205ENST00000554064 SALL2Q9Y467 1007 aaPredicted RBP9.13□□□□□ -0.95
FCF1-205ENST00000554064 PDE4DQ08499 809 aa9.11□□□□□ -0.95
FCF1-205ENST00000554064 FAM160A2Q8N612 972 aaPredicted RBP9.11□□□□□ -0.95
FCF1-205ENST00000554064 BEGAINQ9BUH8 593 aa9.11□□□□□ -0.95
FCF1-205ENST00000554064 SLC19A1P41440 591 aa9.1□□□□□ -0.95
FCF1-205ENST00000554064 MSS51Q4VC12 460 aa9.1□□□□□ -0.95
FCF1-205ENST00000554064 FCF1Q9Y324 198 aaKnown RBP9.1□□□□□ -0.95
FCF1-205ENST00000554064 MS4A1P11836 297 aa9.09□□□□□ -0.95
FCF1-205ENST00000554064 SPIRE2Q8WWL2 714 aa9.09□□□□□ -0.95
FCF1-205ENST00000554064 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
FCF1-205ENST00000554064 EMID1Q96A84 441 aaPredicted RBP9.08□□□□□ -0.96
FCF1-205ENST00000554064 USB1Q9BQ65 265 aaKnown RBP9.08□□□□□ -0.96
FCF1-205ENST00000554064 FDX1P10109 184 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms