RNA–Protein interactions for RNA: ENST00000553942.5

MARK3-207, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best) BASIC

Gene MARK3, Length 2,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-207ENST00000553942 HSPA5P11021 654 aaKnown RBP12.91□□□□□ -0.34
MARK3-207ENST00000553942 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
MARK3-207ENST00000553942 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
MARK3-207ENST00000553942 KIF1BO60333 1816 aa12.9□□□□□ -0.34
MARK3-207ENST00000553942 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.34
MARK3-207ENST00000553942 PRAG1Q86YV5 1406 aa12.9□□□□□ -0.34
MARK3-207ENST00000553942 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.35
MARK3-207ENST00000553942 ADGRB3O60242 1522 aa12.89□□□□□ -0.35
MARK3-207ENST00000553942 C11orf95C9JLR9 678 aaPredicted RBP12.88□□□□□ -0.35
MARK3-207ENST00000553942 ADAMTSL3P82987 1691 aa12.88□□□□□ -0.35
MARK3-207ENST00000553942 LTKP29376 864 aa12.88□□□□□ -0.35
MARK3-207ENST00000553942 POLR3GLQ9BT43 218 aa12.88□□□□□ -0.35
MARK3-207ENST00000553942 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
MARK3-207ENST00000553942 TMEM131LA2VDJ0 1609 aa12.88□□□□□ -0.35
MARK3-207ENST00000553942 BCANQ96GW7 911 aa12.87□□□□□ -0.35
MARK3-207ENST00000553942 A2ML1A8K2U0 1454 aa12.87□□□□□ -0.35
MARK3-207ENST00000553942 HSPA2P54652 639 aa12.86□□□□□ -0.35
MARK3-207ENST00000553942 STK26Q9P289 416 aa12.86□□□□□ -0.35
MARK3-207ENST00000553942 PTPRMP28827 1452 aa12.86□□□□□ -0.35
MARK3-207ENST00000553942 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
MARK3-207ENST00000553942 ST20-MTHFSA0A0A6YYL1 179 aa12.85□□□□□ -0.35
MARK3-207ENST00000553942 SLC26A8Q96RN1 970 aa12.84□□□□□ -0.35
MARK3-207ENST00000553942 TRAK1Q9UPV9 953 aa12.84□□□□□ -0.35
MARK3-207ENST00000553942 NEXMIFQ5QGS0 1516 aa12.84□□□□□ -0.35
MARK3-207ENST00000553942 EIF4G2P78344 907 aaKnown RBP eCLIP12.83□□□□□ -0.351e-6■□□□□ 9.8
MARK3-207ENST00000553942 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.35
MARK3-207ENST00000553942 UHRF1BP1Q6BDS2 1440 aa12.83□□□□□ -0.36
MARK3-207ENST00000553942 USP47Q96K76 1375 aa12.83□□□□□ -0.36
MARK3-207ENST00000553942 TXNDC2Q86VQ3 553 aa12.82□□□□□ -0.36
MARK3-207ENST00000553942 RIMS2Q9UQ26 1411 aa12.82□□□□□ -0.36
MARK3-207ENST00000553942 DDX10Q13206 875 aaKnown RBP12.82□□□□□ -0.36
MARK3-207ENST00000553942 PPLO60437 1756 aa12.81□□□□□ -0.36
MARK3-207ENST00000553942 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
MARK3-207ENST00000553942 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
MARK3-207ENST00000553942 IFT172Q9UG01 1749 aa12.8□□□□□ -0.36
MARK3-207ENST00000553942 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
MARK3-207ENST00000553942 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
MARK3-207ENST00000553942 UBR1Q8IWV7 1749 aa12.8□□□□□ -0.36
MARK3-207ENST00000553942 MYO3AQ8NEV4 1616 aa12.79□□□□□ -0.36
MARK3-207ENST00000553942 TMEM2Q9UHN6 1383 aa12.79□□□□□ -0.36
MARK3-207ENST00000553942 PIK3C2GO75747 1445 aa12.79□□□□□ -0.36
MARK3-207ENST00000553942 C14orf93Q9H972 538 aaKnown RBP12.78□□□□□ -0.36
MARK3-207ENST00000553942 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
MARK3-207ENST00000553942 WASHC2AQ641Q2 1341 aa12.78□□□□□ -0.36
MARK3-207ENST00000553942 NCKAP5LQ9HCH0 1330 aa12.78□□□□□ -0.36
MARK3-207ENST00000553942 TSHZ2Q9NRE2 1034 aa12.77□□□□□ -0.37
MARK3-207ENST00000553942 RPGRIP1LQ68CZ1 1315 aa12.77□□□□□ -0.37
MARK3-207ENST00000553942 METP08581 1390 aa12.76□□□□□ -0.37
MARK3-207ENST00000553942 MYOM2P54296 1465 aa12.76□□□□□ -0.37
MARK3-207ENST00000553942 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
MARK3-207ENST00000553942 THEMISQ8N1K5 641 aaPredicted RBP12.76□□□□□ -0.37
MARK3-207ENST00000553942 CEP170BQ9Y4F5 1589 aaPredicted RBP12.75□□□□□ -0.37
MARK3-207ENST00000553942 NRXN1Q9ULB1 1477 aa12.75□□□□□ -0.37
MARK3-207ENST00000553942 NLRP1Q9C000 1473 aa12.75□□□□□ -0.37
MARK3-207ENST00000553942 ASXL1Q8IXJ9 1541 aa12.74□□□□□ -0.37
MARK3-207ENST00000553942 TESK2Q96S53 571 aa12.73□□□□□ -0.37
MARK3-207ENST00000553942 EID1Q9Y6B2 187 aa12.73□□□□□ -0.37
MARK3-207ENST00000553942 KIF7Q2M1P5 1343 aa12.73□□□□□ -0.37
MARK3-207ENST00000553942 DISP3Q9P2K9 1392 aa12.72□□□□□ -0.37
MARK3-207ENST00000553942 IQGAP1P46940 1657 aa12.72□□□□□ -0.37
MARK3-207ENST00000553942 ALKQ9UM73 1620 aa12.72□□□□□ -0.37
MARK3-207ENST00000553942 GPRASP1Q5JY77 1395 aa12.72□□□□□ -0.37
MARK3-207ENST00000553942 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
MARK3-207ENST00000553942 ADGRB1O14514 1584 aa12.71□□□□□ -0.37
MARK3-207ENST00000553942 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
MARK3-207ENST00000553942 MINK1Q8N4C8 1332 aaPredicted RBP12.71□□□□□ -0.37
MARK3-207ENST00000553942 PRAM1Q96QH2 718 aa12.71□□□□□ -0.37
MARK3-207ENST00000553942 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.38
MARK3-207ENST00000553942 NUTM2FA1L443 756 aa12.71□□□□□ -0.38
MARK3-207ENST00000553942 SUPT16HQ9Y5B9 1047 aaKnown RBP12.7□□□□□ -0.38
MARK3-207ENST00000553942 ADAMTS13Q76LX8 1427 aa12.7□□□□□ -0.38
MARK3-207ENST00000553942 ANKLE2Q86XL3 938 aa12.69□□□□□ -0.38
MARK3-207ENST00000553942 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
MARK3-207ENST00000553942 YTHDC1Q96MU7 727 aaKnown RBP12.69□□□□□ -0.38
MARK3-207ENST00000553942 SCAF11Q99590 1463 aaKnown RBP12.68□□□□□ -0.38
MARK3-207ENST00000553942 MIER1Q8N108 512 aa12.68□□□□□ -0.38
MARK3-207ENST00000553942 SETD1BQ9UPS6 1966 aaKnown RBP12.68□□□□□ -0.38
MARK3-207ENST00000553942 PTPRUQ92729 1446 aa12.67□□□□□ -0.38
MARK3-207ENST00000553942 YTHDC2Q9H6S0 1430 aaKnown RBP12.67□□□□□ -0.38
MARK3-207ENST00000553942 CCDC7Q96M83 1385 aa12.67□□□□□ -0.38
MARK3-207ENST00000553942 ARHGAP23Q9P227 1491 aa12.67□□□□□ -0.38
MARK3-207ENST00000553942 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
MARK3-207ENST00000553942 POGKQ9P215 609 aa12.67□□□□□ -0.38
MARK3-207ENST00000553942 CENPJQ9HC77 1338 aaPredicted RBP12.66□□□□□ -0.38
MARK3-207ENST00000553942 SLIT1O75093 1534 aa12.66□□□□□ -0.38
MARK3-207ENST00000553942 HDGFP51858 240 aaKnown RBP12.66□□□□□ -0.38
MARK3-207ENST00000553942 CABP2Q9NPB3 220 aa12.66□□□□□ -0.38
MARK3-207ENST00000553942 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
MARK3-207ENST00000553942 KCNA6P17658 529 aa12.65□□□□□ -0.38
MARK3-207ENST00000553942 PLEKHG1Q9ULL1 1385 aa12.65□□□□□ -0.38
MARK3-207ENST00000553942 ROBO2Q9HCK4 1378 aa12.64□□□□□ -0.39
MARK3-207ENST00000553942 SETD1AO15047 1707 aaKnown RBP12.64□□□□□ -0.39
MARK3-207ENST00000553942 LMTK3Q96Q04 1460 aa12.64□□□□□ -0.39
MARK3-207ENST00000553942 ZNF142P52746 1687 aaPredicted RBP12.62□□□□□ -0.39
MARK3-207ENST00000553942 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
MARK3-207ENST00000553942 TMF1P82094 1093 aa12.62□□□□□ -0.39
MARK3-207ENST00000553942 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
MARK3-207ENST00000553942 SETBP1Q9Y6X0 1596 aa12.61□□□□□ -0.39
MARK3-207ENST00000553942 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
MARK3-207ENST00000553942 ARHGEF28Q8N1W1 1705 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms