RNA–Protein interactions for RNA: ENST00000553500.5

RPGRIP1-203, Transcript of RPGR interacting protein 1, humanhuman

TSL 4

Gene RPGRIP1, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-203ENST00000553500 DDX27Q96GQ7 796 aaKnown RBP9.9□□□□□ -0.82
RPGRIP1-203ENST00000553500 ARIH1Q9Y4X5 557 aaPredicted RBP9.9□□□□□ -0.82
RPGRIP1-203ENST00000553500 TCOF1Q13428 1488 aaKnown RBP9.9□□□□□ -0.83
RPGRIP1-203ENST00000553500 CPS1P31327 1500 aa9.89□□□□□ -0.83
RPGRIP1-203ENST00000553500 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
RPGRIP1-203ENST00000553500 E2F4Q16254 413 aa9.89□□□□□ -0.83
RPGRIP1-203ENST00000553500 LARP6Q9BRS8 491 aaKnown RBP9.89□□□□□ -0.83
RPGRIP1-203ENST00000553500 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
RPGRIP1-203ENST00000553500 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
RPGRIP1-203ENST00000553500 G3V3G9 751 aa9.87□□□□□ -0.83
RPGRIP1-203ENST00000553500 KIF3CO14782 793 aa9.87□□□□□ -0.83
RPGRIP1-203ENST00000553500 PTPRKQ15262 1439 aa9.87□□□□□ -0.83
RPGRIP1-203ENST00000553500 VWDEQ8N2E2 1590 aa9.86□□□□□ -0.83
RPGRIP1-203ENST00000553500 STRCP1A6NGW2 1772 aa9.86□□□□□ -0.83
RPGRIP1-203ENST00000553500 SHANK2Q9UPX8 1470 aa9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 FOXK1P85037 733 aa9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 ZNF142P52746 1687 aaPredicted RBP9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
RPGRIP1-203ENST00000553500 ARID3CA6NKF2 412 aa9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 PPP1R15BQ5SWA1 713 aa9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 MYO3AQ8NEV4 1616 aa9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 RNF17Q9BXT8 1623 aaKnown RBP9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 PLA2R1Q13018 1463 aa9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 RAPGEF2Q9Y4G8 1499 aa9.84□□□□□ -0.83
RPGRIP1-203ENST00000553500 TMC2Q8TDI7 906 aa9.83□□□□□ -0.84
RPGRIP1-203ENST00000553500 UGGT2Q9NYU1 1516 aa9.82□□□□□ -0.84
RPGRIP1-203ENST00000553500 LRP5O75197 1615 aa9.82□□□□□ -0.84
RPGRIP1-203ENST00000553500 C9orf84Q5VXU9 1444 aa9.82□□□□□ -0.84
RPGRIP1-203ENST00000553500 RAPGEF6Q8TEU7 1601 aa9.81□□□□□ -0.84
RPGRIP1-203ENST00000553500 ATP10AO60312 1499 aa9.8□□□□□ -0.84
RPGRIP1-203ENST00000553500 IGF1RP08069 1367 aa9.8□□□□□ -0.84
RPGRIP1-203ENST00000553500 DSG2Q14126 1118 aa9.8□□□□□ -0.84
RPGRIP1-203ENST00000553500 MAGI2Q86UL8 1455 aa9.79□□□□□ -0.84
RPGRIP1-203ENST00000553500 LRP6O75581 1613 aa9.79□□□□□ -0.84
RPGRIP1-203ENST00000553500 C2orf72A6NCS6 295 aa9.79□□□□□ -0.84
RPGRIP1-203ENST00000553500 CEP170BQ9Y4F5 1589 aaPredicted RBP9.79□□□□□ -0.84
RPGRIP1-203ENST00000553500 POLR1AO95602 1720 aaPredicted RBP9.78□□□□□ -0.84
RPGRIP1-203ENST00000553500 TMEM92Q6UXU6 159 aa9.77□□□□□ -0.85
RPGRIP1-203ENST00000553500 ATP10BO94823 1461 aa9.77□□□□□ -0.85
RPGRIP1-203ENST00000553500 C3orf67Q6ZVT6 689 aa9.75□□□□□ -0.85
RPGRIP1-203ENST00000553500 XIRP1Q702N8 1843 aaKnown RBP9.75□□□□□ -0.85
RPGRIP1-203ENST00000553500 RGS12O14924 1447 aa9.74□□□□□ -0.85
RPGRIP1-203ENST00000553500 PLPP6Q8IY26 295 aa9.74□□□□□ -0.85
RPGRIP1-203ENST00000553500 CFAP74Q9C0B2 1584 aa9.73□□□□□ -0.85
RPGRIP1-203ENST00000553500 DIP2CQ9Y2E4 1556 aa9.73□□□□□ -0.85
RPGRIP1-203ENST00000553500 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.72□□□□□ -0.85
RPGRIP1-203ENST00000553500 SENP3-EIF4A1A0A087X0R7 540 aa9.72□□□□□ -0.85
RPGRIP1-203ENST00000553500 EMILIN3Q9NT22 766 aa9.72□□□□□ -0.85
RPGRIP1-203ENST00000553500 CDK12Q9NYV4 1490 aaPredicted RBP9.72□□□□□ -0.85
RPGRIP1-203ENST00000553500 TESPA1A2RU30 521 aaPredicted RBP9.71□□□□□ -0.86
RPGRIP1-203ENST00000553500 YY1P25490 414 aa9.71□□□□□ -0.86
RPGRIP1-203ENST00000553500 NPATQ14207 1427 aa9.71□□□□□ -0.86
RPGRIP1-203ENST00000553500 SYNMO15061 1565 aa9.71□□□□□ -0.86
RPGRIP1-203ENST00000553500 ABCA6Q8N139 1617 aa9.71□□□□□ -0.86
RPGRIP1-203ENST00000553500 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
RPGRIP1-203ENST00000553500 ROBO1Q9Y6N7 1651 aa9.7□□□□□ -0.86
RPGRIP1-203ENST00000553500 MROH2AA6NES4 1674 aa9.69□□□□□ -0.86
RPGRIP1-203ENST00000553500 SPDYE16A6NNV3 312 aaPredicted RBP9.69□□□□□ -0.86
RPGRIP1-203ENST00000553500 DNMT1P26358 1616 aaKnown RBP9.69□□□□□ -0.86
RPGRIP1-203ENST00000553500 PDIA6Q15084 440 aa9.68□□□□□ -0.86
RPGRIP1-203ENST00000553500 SLC34A2O95436 690 aa9.67□□□□□ -0.86
RPGRIP1-203ENST00000553500 AGLP35573 1532 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 SCAPERQ9BY12 1400 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 CARMIL1Q5VZK9 1371 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 SEMA3EO15041 775 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 OXER1Q8TDS5 423 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 REREQ9P2R6 1566 aa9.66□□□□□ -0.86
RPGRIP1-203ENST00000553500 DPYSL4O14531 572 aa9.65□□□□□ -0.86
RPGRIP1-203ENST00000553500 POTEJP0CG39 1038 aa9.65□□□□□ -0.86
RPGRIP1-203ENST00000553500 POTEB2H3BUK9 544 aa9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 RXRBP28702 533 aa9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 SMYD5Q6GMV2 418 aa9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 PTCD2Q8WV60 388 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 CDK13Q14004 1512 aaKnown RBP9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 FAM135BQ49AJ0 1406 aa9.64□□□□□ -0.87
RPGRIP1-203ENST00000553500 PHLPP1O60346 1717 aa9.63□□□□□ -0.87
RPGRIP1-203ENST00000553500 TPRNQ4KMQ1 711 aa9.63□□□□□ -0.87
RPGRIP1-203ENST00000553500 MAMSTRQ6ZN01 415 aa9.63□□□□□ -0.87
RPGRIP1-203ENST00000553500 CLTCQ00610 1675 aaKnown RBP9.63□□□□□ -0.87
RPGRIP1-203ENST00000553500 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
RPGRIP1-203ENST00000553500 COL16A1Q07092 1604 aaPredicted RBP9.62□□□□□ -0.87
RPGRIP1-203ENST00000553500 KDM5CP41229 1560 aa9.62□□□□□ -0.87
RPGRIP1-203ENST00000553500 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
RPGRIP1-203ENST00000553500 CNTLNQ9NXG0 1405 aa9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 ZNF772Q68DY9 489 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 IQGAP1P46940 1657 aa9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 ZMYM3Q14202 1370 aa9.6□□□□□ -0.87
RPGRIP1-203ENST00000553500 A2ML1A8K2U0 1454 aa9.59□□□□□ -0.87
RPGRIP1-203ENST00000553500 PLCH2O75038 1416 aa9.59□□□□□ -0.87
RPGRIP1-203ENST00000553500 PTGER2P43116 358 aa9.59□□□□□ -0.87
RPGRIP1-203ENST00000553500 MAP3K9P80192 1104 aa9.59□□□□□ -0.87
RPGRIP1-203ENST00000553500 SCUBE2Q9NQ36 999 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms