RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SPIRE2Q8WWL2 714 aa10.39□□□□□ -0.75
SYNE2-210ENST00000553455 MARVELD3Q96A59 401 aa10.39□□□□□ -0.75
SYNE2-210ENST00000553455 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
SYNE2-210ENST00000553455 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
SYNE2-210ENST00000553455 FLIIQ13045 1269 aa10.37□□□□□ -0.75
SYNE2-210ENST00000553455 ZMYND15Q9H091 742 aa10.37□□□□□ -0.75
SYNE2-210ENST00000553455 PBX2P40425 430 aa10.36□□□□□ -0.75
SYNE2-210ENST00000553455 DIXDC1Q155Q3 683 aa10.36□□□□□ -0.75
SYNE2-210ENST00000553455 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
SYNE2-210ENST00000553455 SUPT5HO00267 1087 aaKnown RBP10.35□□□□□ -0.75
SYNE2-210ENST00000553455 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-210ENST00000553455 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
SYNE2-210ENST00000553455 SEPT9Q9UHD8 586 aaPredicted RBP10.35□□□□□ -0.75
SYNE2-210ENST00000553455 POTEB3A0JP26 581 aa10.34□□□□□ -0.75
SYNE2-210ENST00000553455 FAM205CA6NFA0 338 aa10.34□□□□□ -0.75
SYNE2-210ENST00000553455 POTEBQ6S5H4 581 aa10.34□□□□□ -0.75
SYNE2-210ENST00000553455 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
SYNE2-210ENST00000553455 SWT1Q5T5J6 900 aaKnown RBP10.33□□□□□ -0.76
SYNE2-210ENST00000553455 MCM6Q14566 821 aa10.32□□□□□ -0.76
SYNE2-210ENST00000553455 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
SYNE2-210ENST00000553455 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
SYNE2-210ENST00000553455 MOXD2PA6NHM9 499 aa10.31□□□□□ -0.76
SYNE2-210ENST00000553455 SPTLC1O15269 473 aa10.31□□□□□ -0.76
SYNE2-210ENST00000553455 SLC10A3P09131 477 aa10.31□□□□□ -0.76
SYNE2-210ENST00000553455 TUSC1Q2TAM9 212 aa10.31□□□□□ -0.76
SYNE2-210ENST00000553455 RSBN1LQ6PCB5 846 aaPredicted RBP10.31□□□□□ -0.76
SYNE2-210ENST00000553455 NUTM1Q86Y26 1132 aa10.31□□□□□ -0.76
SYNE2-210ENST00000553455 FAM98CQ17RN3 349 aaKnown RBP10.3□□□□□ -0.76
SYNE2-210ENST00000553455 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
SYNE2-210ENST00000553455 HS3ST6Q96QI5 342 aa10.3□□□□□ -0.76
SYNE2-210ENST00000553455 GCGRP47871 477 aa10.29□□□□□ -0.76
SYNE2-210ENST00000553455 PPP2R2DQ66LE6 453 aa10.29□□□□□ -0.76
SYNE2-210ENST00000553455 ATP1B4Q9UN42 357 aaPredicted RBP10.29□□□□□ -0.76
SYNE2-210ENST00000553455 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-210ENST00000553455 NDUFV2P19404 249 aa10.28□□□□□ -0.76
SYNE2-210ENST00000553455 GJA5P36382 358 aa10.28□□□□□ -0.76
SYNE2-210ENST00000553455 RFC5P40937 340 aa10.28□□□□□ -0.76
SYNE2-210ENST00000553455 FAM163AQ96GL9 167 aaPredicted RBP10.28□□□□□ -0.76
SYNE2-210ENST00000553455 KDM4AO75164 1064 aa10.27□□□□□ -0.77
SYNE2-210ENST00000553455 LAPTM4BQ86VI4 370 aa10.26□□□□□ -0.77
SYNE2-210ENST00000553455 PCDHB15Q9Y5E8 787 aa10.26□□□□□ -0.77
SYNE2-210ENST00000553455 TK2O00142 265 aa10.25□□□□□ -0.77
SYNE2-210ENST00000553455 HOXA2O43364 376 aa10.25□□□□□ -0.77
SYNE2-210ENST00000553455 QPCTQ16769 361 aa10.25□□□□□ -0.77
SYNE2-210ENST00000553455 SAMD7Q7Z3H4 446 aa10.25□□□□□ -0.77
SYNE2-210ENST00000553455 LILRB3O75022 631 aa10.24□□□□□ -0.77
SYNE2-210ENST00000553455 USP46P62068 366 aa10.24□□□□□ -0.77
SYNE2-210ENST00000553455 CLUAP1Q96AJ1 413 aa10.24□□□□□ -0.77
SYNE2-210ENST00000553455 NBPF3Q9H094 633 aa10.24□□□□□ -0.77
SYNE2-210ENST00000553455 CSPP1Q1MSJ5 1256 aa10.23□□□□□ -0.77
SYNE2-210ENST00000553455 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
SYNE2-210ENST00000553455 SPDYE5A6NIY4 337 aa10.22□□□□□ -0.77
SYNE2-210ENST00000553455 A6NJR5 290 aa10.22□□□□□ -0.77
SYNE2-210ENST00000553455 UBTFP17480 764 aaKnown RBP10.22□□□□□ -0.77
SYNE2-210ENST00000553455 LSM11P83369 360 aaKnown RBP eCLIP10.22□□□□□ -0.77
SYNE2-210ENST00000553455 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
SYNE2-210ENST00000553455 BANK1Q8NDB2 785 aa10.22□□□□□ -0.77
SYNE2-210ENST00000553455 HLA-CQ95604 372 aa10.22□□□□□ -0.77
SYNE2-210ENST00000553455 GUCA2AQ02747 115 aa10.21□□□□□ -0.77
SYNE2-210ENST00000553455 ADGRD1Q6QNK2 874 aa10.21□□□□□ -0.77
SYNE2-210ENST00000553455 ZFRQ96KR1 1074 aaKnown RBP10.21□□□□□ -0.77
SYNE2-210ENST00000553455 SNRKQ9NRH2 765 aa10.21□□□□□ -0.77
SYNE2-210ENST00000553455 PCDHGC3Q9UN70 934 aa10.21□□□□□ -0.77
SYNE2-210ENST00000553455 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
SYNE2-210ENST00000553455 TMEM259Q4ZIN3 620 aa10.2□□□□□ -0.78
SYNE2-210ENST00000553455 RTL5Q5HYW3 569 aaPredicted RBP10.2□□□□□ -0.78
SYNE2-210ENST00000553455 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
SYNE2-210ENST00000553455 POM121Q96HA1 1249 aa10.2□□□□□ -0.78
SYNE2-210ENST00000553455 C1orf115Q9H7X2 142 aa10.2□□□□□ -0.78
SYNE2-210ENST00000553455 HRO43593 1189 aa10.19□□□□□ -0.78
SYNE2-210ENST00000553455 CFHP08603 1231 aa10.19□□□□□ -0.78
SYNE2-210ENST00000553455 FDX1P10109 184 aa10.19□□□□□ -0.78
SYNE2-210ENST00000553455 PRPF38BQ5VTL8 546 aaKnown RBP10.19□□□□□ -0.78
SYNE2-210ENST00000553455 FUT2Q10981 343 aa10.18□□□□□ -0.78
SYNE2-210ENST00000553455 MRPL50Q8N5N7 158 aaKnown RBP10.18□□□□□ -0.78
SYNE2-210ENST00000553455 HRCP23327 699 aa10.17□□□□□ -0.78
SYNE2-210ENST00000553455 SLC4A3P48751 1232 aa10.17□□□□□ -0.78
SYNE2-210ENST00000553455 MTMR14Q8NCE2 650 aa10.17□□□□□ -0.78
SYNE2-210ENST00000553455 ARXQ96QS3 562 aa10.17□□□□□ -0.78
SYNE2-210ENST00000553455 RNF40O75150 1001 aa10.16□□□□□ -0.78
SYNE2-210ENST00000553455 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
SYNE2-210ENST00000553455 TRAK2O60296 914 aa10.15□□□□□ -0.78
SYNE2-210ENST00000553455 COG6Q9Y2V7 657 aa10.15□□□□□ -0.78
SYNE2-210ENST00000553455 ARID3CA6NKF2 412 aa10.14□□□□□ -0.79
SYNE2-210ENST00000553455 NUTM2BA6NNL0 878 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-210ENST00000553455 NUTM2EB1AL46 878 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-210ENST00000553455 NUTM2DQ5VT03 806 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-210ENST00000553455 NUTM2AQ8IVF1 878 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-210ENST00000553455 FNBP4Q8N3X1 1017 aaPredicted RBP10.14□□□□□ -0.79
SYNE2-210ENST00000553455 SOCS7O14512 581 aa10.13□□□□□ -0.79
SYNE2-210ENST00000553455 AP1G2O75843 785 aa10.13□□□□□ -0.79
SYNE2-210ENST00000553455 PROSER2Q86WR7 435 aaPredicted RBP10.13□□□□□ -0.79
SYNE2-210ENST00000553455 LRCH3Q96II8 777 aa10.13□□□□□ -0.79
SYNE2-210ENST00000553455 USP17L8P0C7I0 530 aa10.12□□□□□ -0.79
SYNE2-210ENST00000553455 ATP6V1AP38606 617 aa10.12□□□□□ -0.79
SYNE2-210ENST00000553455 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
SYNE2-210ENST00000553455 MTMR2Q13614 643 aa10.11□□□□□ -0.79
SYNE2-210ENST00000553455 APBB1O00213 710 aa10.1□□□□□ -0.79
SYNE2-210ENST00000553455 RAD21O60216 631 aa10.1□□□□□ -0.79
SYNE2-210ENST00000553455 KMT5BQ4FZB7 885 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms