RNA–Protein interactions for RNA: ENST00000553189.5

TMTC1-209, Transcript of transmembrane and tetratricopeptide repeat containing 1, humanhuman

TSL 2

Gene TMTC1, Length 5,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMTC1-209ENST00000553189 CHMP3Q9Y3E7 222 aa9.24□□□□□ -0.93
TMTC1-209ENST00000553189 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
TMTC1-209ENST00000553189 HIRIP3Q9BW71 556 aaPredicted RBP9.23□□□□□ -0.93
TMTC1-209ENST00000553189 STK31Q9BXU1 1019 aa9.23□□□□□ -0.93
TMTC1-209ENST00000553189 ROCK2O75116 1388 aaKnown RBP9.23□□□□□ -0.93
TMTC1-209ENST00000553189 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
TMTC1-209ENST00000553189 EXOC5O00471 708 aa9.22□□□□□ -0.93
TMTC1-209ENST00000553189 ROCK1Q13464 1354 aa9.22□□□□□ -0.93
TMTC1-209ENST00000553189 TROQ12816 1431 aaPredicted RBP9.22□□□□□ -0.93
TMTC1-209ENST00000553189 ERICH3Q5RHP9 1530 aa9.22□□□□□ -0.93
TMTC1-209ENST00000553189 DDX54Q8TDD1 881 aaKnown RBP9.22□□□□□ -0.93
TMTC1-209ENST00000553189 MIA2Q96PC5 1412 aa9.22□□□□□ -0.93
TMTC1-209ENST00000553189 WDR62O43379 1518 aa9.22□□□□□ -0.93
TMTC1-209ENST00000553189 WDR7Q9Y4E6 1490 aa9.21□□□□□ -0.93
TMTC1-209ENST00000553189 IQGAP2Q13576 1575 aa9.21□□□□□ -0.93
TMTC1-209ENST00000553189 HSP90AB1P08238 724 aaKnown RBP9.21□□□□□ -0.94
TMTC1-209ENST00000553189 PMFBP1Q8TBY8 1022 aa9.21□□□□□ -0.94
TMTC1-209ENST00000553189 MPHOSPH9Q99550 1183 aa9.21□□□□□ -0.94
TMTC1-209ENST00000553189 SPG7Q9UQ90 795 aa9.21□□□□□ -0.94
TMTC1-209ENST00000553189 ARHGEF11O15085 1522 aa9.21□□□□□ -0.94
TMTC1-209ENST00000553189 RPGRIP1LQ68CZ1 1315 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 KCNH5Q8NCM2 988 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 AMOTL2Q9Y2J4 779 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
TMTC1-209ENST00000553189 NEUROD2Q15784 382 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 AK7Q96M32 723 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 PLCB2Q00722 1185 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 C19orf44Q9H6X5 657 aa9.2□□□□□ -0.94
TMTC1-209ENST00000553189 CLEC11AQ9Y240 323 aa9.19□□□□□ -0.94
TMTC1-209ENST00000553189 XPCQ01831 940 aaPredicted RBP9.19□□□□□ -0.94
TMTC1-209ENST00000553189 FTSJ3Q8IY81 847 aaKnown RBP9.18□□□□□ -0.94
TMTC1-209ENST00000553189 AMOTL1Q8IY63 956 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 USP21Q9UK80 565 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 RGS3P49796 1198 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 ZNF692Q9BU19 519 aaPredicted RBP9.18□□□□□ -0.94
TMTC1-209ENST00000553189 TRPC5Q9UL62 973 aaPredicted RBP9.18□□□□□ -0.94
TMTC1-209ENST00000553189 PLEKHO1Q53GL0 409 aaPredicted RBP9.18□□□□□ -0.94
TMTC1-209ENST00000553189 KRT28Q7Z3Y7 464 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 HSCBQ8IWL3 235 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 PHF8Q9UPP1 1060 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
TMTC1-209ENST00000553189 VPS8Q8N3P4 1428 aa9.17□□□□□ -0.94
TMTC1-209ENST00000553189 PTMSP20962 102 aa9.17□□□□□ -0.94
TMTC1-209ENST00000553189 TULP1O00294 542 aaPredicted RBP9.17□□□□□ -0.94
TMTC1-209ENST00000553189 ZPR1O75312 459 aa9.17□□□□□ -0.94
TMTC1-209ENST00000553189 NCOA2Q15596 1464 aa9.17□□□□□ -0.94
TMTC1-209ENST00000553189 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
TMTC1-209ENST00000553189 NEXNQ0ZGT2 675 aa9.16□□□□□ -0.94
TMTC1-209ENST00000553189 U2AF1L5P0DN76 240 aaPredicted RBP9.16□□□□□ -0.94
TMTC1-209ENST00000553189 U2AF1Q01081 240 aaKnown RBP eCLIP9.16□□□□□ -0.94
TMTC1-209ENST00000553189 NCBP3Q53F19 620 aaKnown RBP9.16□□□□□ -0.94
TMTC1-209ENST00000553189 AMER1Q5JTC6 1135 aaPredicted RBP9.16□□□□□ -0.94
TMTC1-209ENST00000553189 MS4A1P11836 297 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 B4GALNT3Q6L9W6 998 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 KIF6Q6ZMV9 814 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 FYCO1Q9BQS8 1478 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 FOXO3O43524 673 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 TPRNQ4KMQ1 711 aa9.15□□□□□ -0.94
TMTC1-209ENST00000553189 RRBP1Q9P2E9 1410 aaKnown RBP9.15□□□□□ -0.94
TMTC1-209ENST00000553189 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.95
TMTC1-209ENST00000553189 CUX1P39880 1505 aa9.15□□□□□ -0.95
TMTC1-209ENST00000553189 UHRF1BP1LA0JNW5 1464 aa9.14□□□□□ -0.95
TMTC1-209ENST00000553189 QTRT2Q9H974 415 aaKnown RBP9.14□□□□□ -0.95
TMTC1-209ENST00000553189 CENPJQ9HC77 1338 aaPredicted RBP9.14□□□□□ -0.95
TMTC1-209ENST00000553189 CABP4P57796 275 aa9.14□□□□□ -0.95
TMTC1-209ENST00000553189 CC2D1BQ5T0F9 858 aaKnown RBP9.14□□□□□ -0.95
TMTC1-209ENST00000553189 ABCC2Q92887 1545 aa9.14□□□□□ -0.95
TMTC1-209ENST00000553189 AIDAQ96BJ3 306 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 CGNL1Q0VF96 1302 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 DDX58O95786 925 aaKnown RBP9.13□□□□□ -0.95
TMTC1-209ENST00000553189 FBXO31Q5XUX0 539 aaPredicted RBP9.13□□□□□ -0.95
TMTC1-209ENST00000553189 ZNF652Q9Y2D9 606 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 EFCAB5A4FU69 1503 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 C9orf84Q5VXU9 1444 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 HECW1Q76N89 1606 aa9.13□□□□□ -0.95
TMTC1-209ENST00000553189 CUL7Q14999 1698 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 ZNF518AQ6AHZ1 1483 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 TNNT3P45378 269 aaPredicted RBP9.12□□□□□ -0.95
TMTC1-209ENST00000553189 GRM1Q13255 1194 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 ANKRD50Q9ULJ7 1429 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 PRAM1Q96QH2 718 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 CDCA7Q9BWT1 371 aaPredicted RBP9.12□□□□□ -0.95
TMTC1-209ENST00000553189 SMC4Q9NTJ3 1288 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 TFCP2L1Q9NZI6 479 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
TMTC1-209ENST00000553189 KDM6BO15054 1643 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 NGEFQ8N5V2 710 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 KCNA6P17658 529 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 DDB1Q16531 1140 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 RTEL1-TNFRSF6BF6WH68 1400 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 CCER2I3L3R5 266 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 APBA3O96018 575 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
TMTC1-209ENST00000553189 PTPRKQ15262 1439 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 GBP4Q96PP9 640 aa9.11□□□□□ -0.95
TMTC1-209ENST00000553189 CLSTN1O94985 981 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 LMOD1P29536 600 aaPredicted RBP9.1□□□□□ -0.95
TMTC1-209ENST00000553189 ATP10AO60312 1499 aa9.1□□□□□ -0.95
TMTC1-209ENST00000553189 DRC7Q8IY82 874 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms