RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
PPFIA2-228ENST00000553058 ILDR1Q86SU0 546 aaPredicted RBP12.77□□□□□ -0.37
PPFIA2-228ENST00000553058 CARMIL1Q5VZK9 1371 aa12.77□□□□□ -0.37
PPFIA2-228ENST00000553058 KCNA1Q09470 495 aa12.76□□□□□ -0.37
PPFIA2-228ENST00000553058 CALR3Q96L12 384 aaKnown RBP12.76□□□□□ -0.37
PPFIA2-228ENST00000553058 ABCC10Q5T3U5 1492 aa12.76□□□□□ -0.37
PPFIA2-228ENST00000553058 ADCY10Q96PN6 1610 aa12.76□□□□□ -0.37
PPFIA2-228ENST00000553058 CUL7Q14999 1698 aa12.76□□□□□ -0.37
PPFIA2-228ENST00000553058 MAPKBP1O60336 1514 aa12.75□□□□□ -0.37
PPFIA2-228ENST00000553058 KIF13AQ9H1H9 1805 aa12.74□□□□□ -0.37
PPFIA2-228ENST00000553058 TBC1D12O60347 775 aa12.74□□□□□ -0.37
PPFIA2-228ENST00000553058 PRKAR2AP13861 404 aaKnown RBP12.74□□□□□ -0.37
PPFIA2-228ENST00000553058 BRD1O95696 1058 aa12.73□□□□□ -0.37
PPFIA2-228ENST00000553058 RFC5P40937 340 aa12.73□□□□□ -0.37
PPFIA2-228ENST00000553058 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
PPFIA2-228ENST00000553058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.73□□□□□ -0.37
PPFIA2-228ENST00000553058 GDPD2Q9HCC8 539 aa12.72□□□□□ -0.37
PPFIA2-228ENST00000553058 FAM69CQ0P6D2 419 aa12.71□□□□□ -0.37
PPFIA2-228ENST00000553058 WWC1Q8IX03 1113 aa12.71□□□□□ -0.37
PPFIA2-228ENST00000553058 PHOX2BQ99453 314 aa12.71□□□□□ -0.37
PPFIA2-228ENST00000553058 CLK2P49760 499 aaKnown RBP12.7□□□□□ -0.38
PPFIA2-228ENST00000553058 MICALL2Q8IY33 904 aa12.7□□□□□ -0.38
PPFIA2-228ENST00000553058 PTPRGP23470 1445 aa12.7□□□□□ -0.38
PPFIA2-228ENST00000553058 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 TMEM259Q4ZIN3 620 aa12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 GLMNQ92990 594 aa12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 FAM217BQ9NTX9 383 aaPredicted RBP12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 AMOTL2Q9Y2J4 779 aa12.69□□□□□ -0.38
PPFIA2-228ENST00000553058 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
PPFIA2-228ENST00000553058 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
PPFIA2-228ENST00000553058 USTQ9Y2C2 406 aa12.67□□□□□ -0.38
PPFIA2-228ENST00000553058 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
PPFIA2-228ENST00000553058 POM121CA8CG34 1229 aa12.66□□□□□ -0.38
PPFIA2-228ENST00000553058 MTMR14Q8NCE2 650 aa12.66□□□□□ -0.38
PPFIA2-228ENST00000553058 PBXIP1Q96AQ6 731 aa12.66□□□□□ -0.38
PPFIA2-228ENST00000553058 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
PPFIA2-228ENST00000553058 FBXO31Q5XUX0 539 aaPredicted RBP12.65□□□□□ -0.38
PPFIA2-228ENST00000553058 DPY19L2Q6NUT2 758 aa12.65□□□□□ -0.38
PPFIA2-228ENST00000553058 TRPC6Q9Y210 931 aa12.65□□□□□ -0.38
PPFIA2-228ENST00000553058 ABCC2Q92887 1545 aa12.64□□□□□ -0.39
PPFIA2-228ENST00000553058 PHF12Q96QT6 1004 aa12.64□□□□□ -0.39
PPFIA2-228ENST00000553058 UHRF1BP1LA0JNW5 1464 aa12.64□□□□□ -0.39
PPFIA2-228ENST00000553058 CARMIL2Q6F5E8 1435 aa12.63□□□□□ -0.39
PPFIA2-228ENST00000553058 ABL2P42684 1182 aa12.63□□□□□ -0.39
PPFIA2-228ENST00000553058 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
PPFIA2-228ENST00000553058 NPDC1Q9NQX5 325 aaPredicted RBP12.63□□□□□ -0.39
PPFIA2-228ENST00000553058 RAPGEF2Q9Y4G8 1499 aa12.63□□□□□ -0.39
PPFIA2-228ENST00000553058 UGGT2Q9NYU1 1516 aa12.62□□□□□ -0.39
PPFIA2-228ENST00000553058 KIF3CO14782 793 aa12.62□□□□□ -0.39
PPFIA2-228ENST00000553058 HMGB1P09429 215 aaKnown RBP12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 CSB-PGBD3P0DP91 1061 aa12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 PPP2R2DQ66LE6 453 aa12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 CDHR5Q9HBB8 845 aa12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 ZRANB1Q9UGI0 708 aa12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 UACAQ9BZF9 1416 aa12.61□□□□□ -0.39
PPFIA2-228ENST00000553058 TBC1D2Q9BYX2 928 aa12.6□□□□□ -0.39
PPFIA2-228ENST00000553058 ASXL2Q76L83 1435 aa12.6□□□□□ -0.39
PPFIA2-228ENST00000553058 TTBK1Q5TCY1 1321 aaPredicted RBP12.6□□□□□ -0.39
PPFIA2-228ENST00000553058 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.58□□□□□ -0.4
PPFIA2-228ENST00000553058 PRM3Q9NNZ6 103 aa12.58□□□□□ -0.4
PPFIA2-228ENST00000553058 PLB1Q6P1J6 1458 aa12.58□□□□□ -0.4
PPFIA2-228ENST00000553058 KDM5BQ9UGL1 1544 aa12.57□□□□□ -0.4
PPFIA2-228ENST00000553058 EVI5O60447 810 aa12.57□□□□□ -0.4
PPFIA2-228ENST00000553058 IVNS1ABPQ9Y6Y0 642 aa12.57□□□□□ -0.4
PPFIA2-228ENST00000553058 GLI2P10070 1586 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 SND1Q7KZF4 910 aaKnown RBP eCLIP12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 LIMD1Q9UGP4 676 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 TBC1D2BQ9UPU7 963 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
PPFIA2-228ENST00000553058 SOCS7O14512 581 aa12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 HSP90B1P14625 803 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 RFX1P22670 979 aa12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 SRPK2P78362 688 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 KIAA0556O60303 1618 aa12.55□□□□□ -0.4
PPFIA2-228ENST00000553058 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
PPFIA2-228ENST00000553058 PPRC1Q5VV67 1664 aaKnown RBP12.54□□□□□ -0.4
PPFIA2-228ENST00000553058 COL17A1Q9UMD9 1497 aaPredicted RBP12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 EPRSP07814 1512 aaKnown RBP12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 KDM6BO15054 1643 aa12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 CARNS1A5YM72 827 aa12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 METTL3Q86U44 580 aaKnown RBP12.53□□□□□ -0.4
PPFIA2-228ENST00000553058 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
PPFIA2-228ENST00000553058 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
PPFIA2-228ENST00000553058 MS4A3Q96HJ5 214 aa12.52□□□□□ -0.41
PPFIA2-228ENST00000553058 PUS7Q96PZ0 661 aaKnown RBP12.52□□□□□ -0.41
PPFIA2-228ENST00000553058 MYT1LQ9UL68 1186 aa12.52□□□□□ -0.41
PPFIA2-228ENST00000553058 TTLL13PA6NNM8 815 aa12.51□□□□□ -0.41
PPFIA2-228ENST00000553058 FXR2P51116 673 aaKnown RBP eCLIP12.51□□□□□ -0.41
PPFIA2-228ENST00000553058 FAM161AQ3B820 660 aa12.51□□□□□ -0.41
PPFIA2-228ENST00000553058 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
PPFIA2-228ENST00000553058 OATP04181 439 aa12.5□□□□□ -0.41
PPFIA2-228ENST00000553058 RIC3Q7Z5B4 369 aa12.5□□□□□ -0.41
PPFIA2-228ENST00000553058 ADAMTS19Q8TE59 1207 aa12.5□□□□□ -0.41
PPFIA2-228ENST00000553058 TSPOAP1O95153 1857 aa12.5□□□□□ -0.41
PPFIA2-228ENST00000553058 TIE1P35590 1138 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms