RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 CAMSAP2Q08AD1 1489 aa10.88□□□□□ -0.67
LETMD1-236ENST00000553043 C19orf44Q9H6X5 657 aa10.88□□□□□ -0.67
LETMD1-236ENST00000553043 ADAMTS2O95450 1211 aa10.87□□□□□ -0.67
LETMD1-236ENST00000553043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.673e-14■□□□□ 10.9
LETMD1-236ENST00000553043 SHPRHQ149N8 1683 aa10.87□□□□□ -0.67
LETMD1-236ENST00000553043 CFAP65Q6ZU64 1925 aaKnown RBP10.87□□□□□ -0.67
LETMD1-236ENST00000553043 AHDC1Q5TGY3 1603 aaPredicted RBP10.87□□□□□ -0.67
LETMD1-236ENST00000553043 NWD1Q149M9 1564 aa10.86□□□□□ -0.67
LETMD1-236ENST00000553043 EFCAB6Q5THR3 1501 aa10.86□□□□□ -0.67
LETMD1-236ENST00000553043 PIK3C2BO00750 1634 aa10.86□□□□□ -0.67
LETMD1-236ENST00000553043 ARHGAP31Q2M1Z3 1444 aa10.85□□□□□ -0.67
LETMD1-236ENST00000553043 CCDC125Q86Z20 511 aa10.85□□□□□ -0.67
LETMD1-236ENST00000553043 LRRC59Q96AG4 307 aaKnown RBP10.85□□□□□ -0.67
LETMD1-236ENST00000553043 CEP162Q5TB80 1403 aa10.84□□□□□ -0.67
LETMD1-236ENST00000553043 PPP1R15AO75807 674 aaPredicted RBP10.84□□□□□ -0.67
LETMD1-236ENST00000553043 USP21Q9UK80 565 aa10.84□□□□□ -0.67
LETMD1-236ENST00000553043 KDM5AP29375 1690 aaKnown RBP10.84□□□□□ -0.67
LETMD1-236ENST00000553043 MROH1Q8NDA8 1641 aa10.84□□□□□ -0.67
LETMD1-236ENST00000553043 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
LETMD1-236ENST00000553043 DIP2AQ14689 1571 aa10.83□□□□□ -0.68
LETMD1-236ENST00000553043 DDX17Q92841 729 aaKnown RBP10.83□□□□□ -0.68
LETMD1-236ENST00000553043 TRPC5Q9UL62 973 aaPredicted RBP10.83□□□□□ -0.68
LETMD1-236ENST00000553043 CEP152O94986 1710 aa10.83□□□□□ -0.68
LETMD1-236ENST00000553043 SETD5Q9C0A6 1442 aa10.82□□□□□ -0.68
LETMD1-236ENST00000553043 MAST1Q9Y2H9 1570 aa10.82□□□□□ -0.68
LETMD1-236ENST00000553043 EHBP1L1Q8N3D4 1523 aa10.81□□□□□ -0.68
LETMD1-236ENST00000553043 TBX22Q9Y458 520 aa10.81□□□□□ -0.68
LETMD1-236ENST00000553043 PNPLA6Q8IY17 1366 aa10.8□□□□□ -0.68
LETMD1-236ENST00000553043 DEFB132Q7Z7B7 95 aa10.8□□□□□ -0.68
LETMD1-236ENST00000553043 PLEKHG1Q9ULL1 1385 aa10.79□□□□□ -0.68
LETMD1-236ENST00000553043 ARHGEF5Q12774 1597 aa10.79□□□□□ -0.68
LETMD1-236ENST00000553043 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
LETMD1-236ENST00000553043 EIF2AK4Q9P2K8 1649 aaKnown RBP10.78□□□□□ -0.68
LETMD1-236ENST00000553043 RRP7BPQ9NSQ0 103 aa10.78□□□□□ -0.68
LETMD1-236ENST00000553043 ASXL1Q8IXJ9 1541 aa10.78□□□□□ -0.68
LETMD1-236ENST00000553043 KANK1Q14678 1352 aa10.77□□□□□ -0.68
LETMD1-236ENST00000553043 PSDA5PKW4 1024 aaPredicted RBP10.77□□□□□ -0.69
LETMD1-236ENST00000553043 SLC52A1Q9NWF4 448 aa10.77□□□□□ -0.69
LETMD1-236ENST00000553043 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
LETMD1-236ENST00000553043 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.77□□□□□ -0.69
LETMD1-236ENST00000553043 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
LETMD1-236ENST00000553043 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 CHD2O14647 1828 aaKnown RBP10.75□□□□□ -0.69
LETMD1-236ENST00000553043 ADGRB3O60242 1522 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 DUOX2Q9NRD8 1548 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 YY1P25490 414 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 SF3B2Q13435 895 aaKnown RBP10.75□□□□□ -0.69
LETMD1-236ENST00000553043 KIF15Q9NS87 1388 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 ATRNO75882 1429 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 ZFYVE9O95405 1425 aa10.75□□□□□ -0.69
LETMD1-236ENST00000553043 BLMP54132 1417 aaPredicted RBP10.75□□□□□ -0.69
LETMD1-236ENST00000553043 CHGAP10645 457 aaKnown RBP10.74□□□□□ -0.69
LETMD1-236ENST00000553043 HRCP23327 699 aa10.74□□□□□ -0.69
LETMD1-236ENST00000553043 NOS1P29475 1434 aa10.74□□□□□ -0.69
LETMD1-236ENST00000553043 MST1RQ04912 1400 aa10.74□□□□□ -0.69
LETMD1-236ENST00000553043 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.73□□□□□ -0.69
LETMD1-236ENST00000553043 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
LETMD1-236ENST00000553043 GJD4Q96KN9 370 aaPredicted RBP10.72□□□□□ -0.69
LETMD1-236ENST00000553043 LRP5O75197 1615 aa10.72□□□□□ -0.69
LETMD1-236ENST00000553043 DCCP43146 1447 aa10.71□□□□□ -0.69
LETMD1-236ENST00000553043 ERBINQ96RT1 1412 aa10.71□□□□□ -0.69
LETMD1-236ENST00000553043 PIK3R4Q99570 1358 aa10.71□□□□□ -0.69
LETMD1-236ENST00000553043 PTPRUQ92729 1446 aa10.7□□□□□ -0.7
LETMD1-236ENST00000553043 PTCH1Q13635 1447 aa10.69□□□□□ -0.7
LETMD1-236ENST00000553043 NHSL1Q5SYE7 1610 aa10.69□□□□□ -0.7
LETMD1-236ENST00000553043 BCL9LQ86UU0 1499 aa10.68□□□□□ -0.7
LETMD1-236ENST00000553043 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
LETMD1-236ENST00000553043 LMTK2Q8IWU2 1503 aa10.68□□□□□ -0.7
LETMD1-236ENST00000553043 MYOM3Q5VTT5 1437 aa10.67□□□□□ -0.7
LETMD1-236ENST00000553043 SOS2Q07890 1332 aaPredicted RBP10.67□□□□□ -0.7
LETMD1-236ENST00000553043 ORAI2Q96SN7 254 aa10.67□□□□□ -0.7
LETMD1-236ENST00000553043 CHIC2Q9UKJ5 165 aa10.66□□□□□ -0.7
LETMD1-236ENST00000553043 BAG6P46379 1132 aa10.65□□□□□ -0.7
LETMD1-236ENST00000553043 R3HDM1Q15032 1099 aaKnown RBP10.65□□□□□ -0.7
LETMD1-236ENST00000553043 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
LETMD1-236ENST00000553043 TRPM2O94759 1503 aa10.64□□□□□ -0.71
LETMD1-236ENST00000553043 UNC5CLQ8IV45 518 aa10.64□□□□□ -0.71
LETMD1-236ENST00000553043 ABCC5O15440 1437 aa10.64□□□□□ -0.71
LETMD1-236ENST00000553043 C1orf167Q5SNV9 1468 aa10.63□□□□□ -0.71
LETMD1-236ENST00000553043 EP400Q96L91 3159 aa10.63□□□□□ -0.71
LETMD1-236ENST00000553043 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
LETMD1-236ENST00000553043 RALGAPBQ86X10 1494 aa10.62□□□□□ -0.71
LETMD1-236ENST00000553043 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
LETMD1-236ENST00000553043 KRT27Q7Z3Y8 459 aa10.62□□□□□ -0.71
LETMD1-236ENST00000553043 TMEM131LA2VDJ0 1609 aa10.62□□□□□ -0.71
LETMD1-236ENST00000553043 SENP3-EIF4A1A0A087X0R7 540 aa10.61□□□□□ -0.71
LETMD1-236ENST00000553043 KANK4Q5T7N3 995 aaPredicted RBP10.61□□□□□ -0.71
LETMD1-236ENST00000553043 METP08581 1390 aa10.61□□□□□ -0.71
LETMD1-236ENST00000553043 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
LETMD1-236ENST00000553043 CCDC9Q9Y3X0 531 aaKnown RBP10.6□□□□□ -0.71
LETMD1-236ENST00000553043 ANKRD30AQ9BXX3 1397 aa10.6□□□□□ -0.71
LETMD1-236ENST00000553043 MYOM2P54296 1465 aa10.6□□□□□ -0.71
LETMD1-236ENST00000553043 RPRD2Q5VT52 1461 aaKnown RBP10.6□□□□□ -0.71
LETMD1-236ENST00000553043 GCC2Q8IWJ2 1684 aa10.6□□□□□ -0.71
LETMD1-236ENST00000553043 A0A0G2JS52 829 aa10.59□□□□□ -0.71
LETMD1-236ENST00000553043 MYT1Q01538 1121 aa10.59□□□□□ -0.71
LETMD1-236ENST00000553043 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
LETMD1-236ENST00000553043 UNC13BO14795 1591 aa10.58□□□□□ -0.72
LETMD1-236ENST00000553043 GLI3P10071 1580 aa10.58□□□□□ -0.72
LETMD1-236ENST00000553043 DCAF8L1A6NGE4 600 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms