RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 NUTM2FA1L443 756 aa7.66□□□□□ -1.18
USP44-208ENST00000552440 RSPH4AQ5TD94 716 aa7.66□□□□□ -1.18
USP44-208ENST00000552440 ERICH6Q7L0X2 663 aa7.66□□□□□ -1.18
USP44-208ENST00000552440 TMUB1Q9BVT8 246 aa7.66□□□□□ -1.18
USP44-208ENST00000552440 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
USP44-208ENST00000552440 MLLT3P42568 568 aaPredicted RBP7.66□□□□□ -1.18
USP44-208ENST00000552440 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.66□□□□□ -1.18
USP44-208ENST00000552440 APLP1P51693 650 aa7.65□□□□□ -1.18
USP44-208ENST00000552440 KMT5BQ4FZB7 885 aa7.65□□□□□ -1.18
USP44-208ENST00000552440 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
USP44-208ENST00000552440 OATP04181 439 aa7.64□□□□□ -1.19
USP44-208ENST00000552440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.63□□□□□ -1.19
USP44-208ENST00000552440 PPP1R18Q6NYC8 613 aa7.63□□□□□ -1.19
USP44-208ENST00000552440 Q6ZNB5 142 aa7.63□□□□□ -1.19
USP44-208ENST00000552440 PCDHB3Q9Y5E6 796 aa7.63□□□□□ -1.19
USP44-208ENST00000552440 PRKD2Q9BZL6 878 aa7.62□□□□□ -1.19
USP44-208ENST00000552440 TMEM134Q9H6X4 195 aa7.62□□□□□ -1.19
USP44-208ENST00000552440 ADGRG1Q9Y653 693 aa7.62□□□□□ -1.19
USP44-208ENST00000552440 ZPR1O75312 459 aa7.61□□□□□ -1.19
USP44-208ENST00000552440 HIC1Q14526 733 aa7.6□□□□□ -1.19
USP44-208ENST00000552440 GFRA3O60609 400 aa7.59□□□□□ -1.19
USP44-208ENST00000552440 ZNF516Q92618 1163 aa7.59□□□□□ -1.19
USP44-208ENST00000552440 RCCD1A6NED2 376 aa7.59□□□□□ -1.19
USP44-208ENST00000552440 NRG2O14511 850 aaPredicted RBP7.59□□□□□ -1.19
USP44-208ENST00000552440 RANGAP1P46060 587 aaPredicted RBP7.59□□□□□ -1.19
USP44-208ENST00000552440 COPS2P61201 443 aa7.59□□□□□ -1.19
USP44-208ENST00000552440 ACTN4O43707 911 aaKnown RBP7.58□□□□□ -1.2
USP44-208ENST00000552440 SEMA3EO15041 775 aa7.57□□□□□ -1.2
USP44-208ENST00000552440 NR1I2O75469 434 aa7.57□□□□□ -1.2
USP44-208ENST00000552440 TESPA1A2RU30 521 aaPredicted RBP7.56□□□□□ -1.2
USP44-208ENST00000552440 CFHP08603 1231 aa7.54□□□□□ -1.2
USP44-208ENST00000552440 TRAF7Q6Q0C0 670 aa7.54□□□□□ -1.2
USP44-208ENST00000552440 BLOC1S3Q6QNY0 202 aa7.54□□□□□ -1.2
USP44-208ENST00000552440 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
USP44-208ENST00000552440 PXYLP1Q8TE99 480 aa7.54□□□□□ -1.2
USP44-208ENST00000552440 GNPATO15228 680 aa7.53□□□□□ -1.2
USP44-208ENST00000552440 ANKLE1Q8NAG6 615 aa7.52□□□□□ -1.21
USP44-208ENST00000552440 PDZRN3Q9UPQ7 1066 aa7.52□□□□□ -1.21
USP44-208ENST00000552440 METTL3Q86U44 580 aaKnown RBP7.51□□□□□ -1.21
USP44-208ENST00000552440 SULF1Q8IWU6 871 aa7.51□□□□□ -1.21
USP44-208ENST00000552440 SLC19A1P41440 591 aa7.5□□□□□ -1.21
USP44-208ENST00000552440 ADH1BP00325 375 aa7.5□□□□□ -1.21
USP44-208ENST00000552440 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
USP44-208ENST00000552440 TMEM132AQ24JP5 1023 aa7.49□□□□□ -1.21
USP44-208ENST00000552440 SLC10A3P09131 477 aa7.48□□□□□ -1.21
USP44-208ENST00000552440 FAM161AQ3B820 660 aa7.48□□□□□ -1.21
USP44-208ENST00000552440 RBM26Q5T8P6 1007 aaKnown RBP7.48□□□□□ -1.21
USP44-208ENST00000552440 SLC6A16Q9GZN6 736 aa7.48□□□□□ -1.21
USP44-208ENST00000552440 GRIPAP1Q4V328 841 aa7.47□□□□□ -1.21
USP44-208ENST00000552440 ZNF598Q86UK7 904 aaKnown RBP7.47□□□□□ -1.21
USP44-208ENST00000552440 SCUBE3Q8IX30 993 aa7.46□□□□□ -1.21
USP44-208ENST00000552440 RDH13Q8NBN7 331 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 PRR20EP86478 221 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 PRR20CP86479 221 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 PRR20DP86480 221 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 PRR20BP86481 221 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 PRR20AP86496 221 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 SPRYD7Q5W111 196 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 LMOD2Q6P5Q4 547 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 GPIHBP1Q8IV16 184 aa7.45□□□□□ -1.22
USP44-208ENST00000552440 S1PR4O95977 384 aa7.44□□□□□ -1.22
USP44-208ENST00000552440 ATP6V1AP38606 617 aa7.44□□□□□ -1.22
USP44-208ENST00000552440 SPSB2Q99619 263 aa7.44□□□□□ -1.22
USP44-208ENST00000552440 PODXL2Q9NZ53 605 aa7.44□□□□□ -1.22
USP44-208ENST00000552440 SALL2Q9Y467 1007 aaPredicted RBP7.44□□□□□ -1.22
USP44-208ENST00000552440 DGAT1O75907 488 aa7.43□□□□□ -1.22
USP44-208ENST00000552440 TLL1O43897 1013 aa7.43□□□□□ -1.22
USP44-208ENST00000552440 C14orf37Q86TY3 774 aa7.43□□□□□ -1.22
USP44-208ENST00000552440 DDX11L8A8MPP1 907 aa7.42□□□□□ -1.22
USP44-208ENST00000552440 FMNL1O95466 1100 aaPredicted RBP7.42□□□□□ -1.22
USP44-208ENST00000552440 PKDCCQ504Y2 493 aa7.42□□□□□ -1.22
USP44-208ENST00000552440 CD2BP2O95400 341 aaKnown RBP7.41□□□□□ -1.22
USP44-208ENST00000552440 GCGRP47871 477 aa7.41□□□□□ -1.22
USP44-208ENST00000552440 RPIAP49247 311 aa7.41□□□□□ -1.22
USP44-208ENST00000552440 ZNF697Q5TEC3 545 aa7.41□□□□□ -1.22
USP44-208ENST00000552440 GPR37O15354 613 aa7.4□□□□□ -1.23
USP44-208ENST00000552440 Q3C1V9 767 aa7.4□□□□□ -1.23
USP44-208ENST00000552440 MORN1Q5T089 497 aa7.4□□□□□ -1.23
USP44-208ENST00000552440 FECHP22830 423 aa7.38□□□□□ -1.23
USP44-208ENST00000552440 ZNF787Q6DD87 383 aa7.38□□□□□ -1.23
USP44-208ENST00000552440 FUT2Q10981 343 aa7.38□□□□□ -1.23
USP44-208ENST00000552440 PUS10Q3MIT2 529 aaKnown RBP7.38□□□□□ -1.23
USP44-208ENST00000552440 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
USP44-208ENST00000552440 PPEF1O14829 653 aaPredicted RBP7.37□□□□□ -1.23
USP44-208ENST00000552440 MAP2K5Q13163 448 aa7.37□□□□□ -1.23
USP44-208ENST00000552440 MINK1Q8N4C8 1332 aaPredicted RBP7.36□□□□□ -1.23
USP44-208ENST00000552440 ZBTB24O43167 697 aaPredicted RBP7.36□□□□□ -1.23
USP44-208ENST00000552440 USP46P62068 366 aa7.36□□□□□ -1.23
USP44-208ENST00000552440 MSS51Q4VC12 460 aa7.35□□□□□ -1.23
USP44-208ENST00000552440 TRIM67Q6ZTA4 783 aa7.35□□□□□ -1.23
USP44-208ENST00000552440 THAP11Q96EK4 314 aa7.35□□□□□ -1.23
USP44-208ENST00000552440 SLC27A5Q9Y2P5 690 aa7.35□□□□□ -1.23
USP44-208ENST00000552440 GDF9O60383 454 aa7.34□□□□□ -1.23
USP44-208ENST00000552440 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
USP44-208ENST00000552440 EMID1Q96A84 441 aaPredicted RBP7.34□□□□□ -1.23
USP44-208ENST00000552440 LCE2BO14633 110 aa7.34□□□□□ -1.24
USP44-208ENST00000552440 IRF6O14896 467 aa7.34□□□□□ -1.24
USP44-208ENST00000552440 FAM187AA6NFU0 413 aa7.32□□□□□ -1.24
USP44-208ENST00000552440 MYT1Q01538 1121 aa7.32□□□□□ -1.24
USP44-208ENST00000552440 FCF1Q9Y324 198 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms