RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
USP44-207ENST00000552237 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
USP44-207ENST00000552237 TLL1O43897 1013 aa10.81□□□□□ -0.68
USP44-207ENST00000552237 MLLT3P42568 568 aaPredicted RBP10.79□□□□□ -0.68
USP44-207ENST00000552237 ARHGEF1Q92888 912 aaKnown RBP10.78□□□□□ -0.68
USP44-207ENST00000552237 CFHP08603 1231 aa10.77□□□□□ -0.69
USP44-207ENST00000552237 PTGDRQ13258 359 aa10.77□□□□□ -0.69
USP44-207ENST00000552237 ANKLE1Q8NAG6 615 aa10.77□□□□□ -0.69
USP44-207ENST00000552237 TMEM134Q9H6X4 195 aa10.77□□□□□ -0.69
USP44-207ENST00000552237 S1PR4O95977 384 aa10.76□□□□□ -0.69
USP44-207ENST00000552237 SPRYD7Q5W111 196 aa10.76□□□□□ -0.69
USP44-207ENST00000552237 NUTM2FA1L443 756 aa10.75□□□□□ -0.69
USP44-207ENST00000552237 ACTN4O43707 911 aaKnown RBP10.75□□□□□ -0.69
USP44-207ENST00000552237 TRIM67Q6ZTA4 783 aa10.75□□□□□ -0.69
USP44-207ENST00000552237 ZNF598Q86UK7 904 aaKnown RBP10.75□□□□□ -0.69
USP44-207ENST00000552237 ADGRG1Q9Y653 693 aa10.75□□□□□ -0.69
USP44-207ENST00000552237 RCCD1A6NED2 376 aa10.74□□□□□ -0.69
USP44-207ENST00000552237 PPEF1O14829 653 aaPredicted RBP10.74□□□□□ -0.69
USP44-207ENST00000552237 DGAT1O75907 488 aa10.74□□□□□ -0.69
USP44-207ENST00000552237 ZNF697Q5TEC3 545 aa10.74□□□□□ -0.69
USP44-207ENST00000552237 ZNF775Q96BV0 537 aaPredicted RBP10.74□□□□□ -0.69
USP44-207ENST00000552237 NR1I2O75469 434 aa10.73□□□□□ -0.69
USP44-207ENST00000552237 FAM187AA6NFU0 413 aa10.72□□□□□ -0.69
USP44-207ENST00000552237 ADH1BP00325 375 aa10.72□□□□□ -0.69
USP44-207ENST00000552237 PRR20EP86478 221 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 PRR20CP86479 221 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 PRR20DP86480 221 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 PRR20BP86481 221 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 PRR20AP86496 221 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 FAM161AQ3B820 660 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 KCNV2Q8TDN2 545 aa10.71□□□□□ -0.69
USP44-207ENST00000552237 EMID1Q96A84 441 aaPredicted RBP10.71□□□□□ -0.69
USP44-207ENST00000552237 TNFRSF10AO00220 468 aa10.7□□□□□ -0.7
USP44-207ENST00000552237 MYT1Q01538 1121 aa10.7□□□□□ -0.7
USP44-207ENST00000552237 SLC6A16Q9GZN6 736 aa10.69□□□□□ -0.7
USP44-207ENST00000552237 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.68□□□□□ -0.7
USP44-207ENST00000552237 LIAT1Q6ZQX7 453 aa10.68□□□□□ -0.7
USP44-207ENST00000552237 FCHSD2O94868 740 aa10.67□□□□□ -0.7
USP44-207ENST00000552237 RSPH4AQ5TD94 716 aa10.67□□□□□ -0.7
USP44-207ENST00000552237 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
USP44-207ENST00000552237 SLC10A3P09131 477 aa10.65□□□□□ -0.7
USP44-207ENST00000552237 GDF9O60383 454 aa10.63□□□□□ -0.71
USP44-207ENST00000552237 OATP04181 439 aa10.63□□□□□ -0.71
USP44-207ENST00000552237 TSHZ2Q9NRE2 1034 aa10.63□□□□□ -0.71
USP44-207ENST00000552237 P3H3Q8IVL6 736 aa10.62□□□□□ -0.71
USP44-207ENST00000552237 FOXC1Q12948 553 aa10.61□□□□□ -0.71
USP44-207ENST00000552237 PUS10Q3MIT2 529 aaKnown RBP10.61□□□□□ -0.71
USP44-207ENST00000552237 SCUBE3Q8IX30 993 aa10.61□□□□□ -0.71
USP44-207ENST00000552237 SPSB2Q99619 263 aa10.61□□□□□ -0.71
USP44-207ENST00000552237 POTECB2RU33 542 aa10.6□□□□□ -0.71
USP44-207ENST00000552237 PLA2G2CQ5R387 149 aa10.6□□□□□ -0.71
USP44-207ENST00000552237 PXYLP1Q8TE99 480 aa10.6□□□□□ -0.71
USP44-207ENST00000552237 ST8SIA5O15466 376 aa10.58□□□□□ -0.72
USP44-207ENST00000552237 RDH13Q8NBN7 331 aa10.58□□□□□ -0.72
USP44-207ENST00000552237 LMOD2Q6P5Q4 547 aa10.57□□□□□ -0.72
USP44-207ENST00000552237 AAASQ9NRG9 546 aa10.56□□□□□ -0.72
USP44-207ENST00000552237 SEMA3EO15041 775 aa10.55□□□□□ -0.72
USP44-207ENST00000552237 HIC1Q14526 733 aa10.55□□□□□ -0.72
USP44-207ENST00000552237 METTL3Q86U44 580 aaKnown RBP10.55□□□□□ -0.72
USP44-207ENST00000552237 RPIAP49247 311 aa10.53□□□□□ -0.72
USP44-207ENST00000552237 PKD2L1Q9P0L9 805 aa10.53□□□□□ -0.72
USP44-207ENST00000552237 FCF1Q9Y324 198 aaKnown RBP10.53□□□□□ -0.72
USP44-207ENST00000552237 CD2BP2O95400 341 aaKnown RBP10.52□□□□□ -0.73
USP44-207ENST00000552237 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
USP44-207ENST00000552237 CYP4X1Q8N118 509 aa10.51□□□□□ -0.73
USP44-207ENST00000552237 FMNL1O95466 1100 aaPredicted RBP10.5□□□□□ -0.73
USP44-207ENST00000552237 FUT2Q10981 343 aa10.49□□□□□ -0.73
USP44-207ENST00000552237 MORN1Q5T089 497 aa10.49□□□□□ -0.73
USP44-207ENST00000552237 DAXXQ9UER7 740 aaPredicted RBP10.49□□□□□ -0.73
USP44-207ENST00000552237 ZBTB24O43167 697 aaPredicted RBP10.48□□□□□ -0.73
USP44-207ENST00000552237 ATP6V1AP38606 617 aa10.48□□□□□ -0.73
USP44-207ENST00000552237 SMYD5Q6GMV2 418 aa10.48□□□□□ -0.73
USP44-207ENST00000552237 TREML4Q6UXN2 200 aa10.48□□□□□ -0.73
USP44-207ENST00000552237 AXIN1O15169 862 aa10.47□□□□□ -0.73
USP44-207ENST00000552237 GNPATO15228 680 aa10.47□□□□□ -0.73
USP44-207ENST00000552237 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
USP44-207ENST00000552237 RBM26Q5T8P6 1007 aaKnown RBP10.46□□□□□ -0.73
USP44-207ENST00000552237 CRIPAKQ8N1N5 446 aa10.46□□□□□ -0.73
USP44-207ENST00000552237 TTC24A2A3L6 582 aaPredicted RBP10.45□□□□□ -0.74
USP44-207ENST00000552237 TOR4AQ9NXH8 423 aa10.45□□□□□ -0.74
USP44-207ENST00000552237 SLC27A5Q9Y2P5 690 aa10.45□□□□□ -0.74
USP44-207ENST00000552237 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
USP44-207ENST00000552237 CTC1Q2NKJ3 1217 aa10.44□□□□□ -0.74
USP44-207ENST00000552237 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
USP44-207ENST00000552237 PRDM9Q9NQV7 894 aa10.44□□□□□ -0.74
USP44-207ENST00000552237 AVPP01185 164 aa10.43□□□□□ -0.74
USP44-207ENST00000552237 NLRP7Q8WX94 980 aa10.43□□□□□ -0.74
USP44-207ENST00000552237 GMPR2Q9P2T1 348 aaKnown RBP10.43□□□□□ -0.74
USP44-207ENST00000552237 DACH1Q9UI36 760 aa10.43□□□□□ -0.74
USP44-207ENST00000552237 FECHP22830 423 aa10.42□□□□□ -0.74
USP44-207ENST00000552237 GCGRP47871 477 aa10.42□□□□□ -0.74
USP44-207ENST00000552237 GRIPAP1Q4V328 841 aa10.42□□□□□ -0.74
USP44-207ENST00000552237 FAM160A2Q8N612 972 aaPredicted RBP10.42□□□□□ -0.74
USP44-207ENST00000552237 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.74
USP44-207ENST00000552237 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
USP44-207ENST00000552237 WFS1O76024 890 aa10.39□□□□□ -0.75
USP44-207ENST00000552237 MSS51Q4VC12 460 aa10.38□□□□□ -0.75
USP44-207ENST00000552237 BRICD5Q6PL45 260 aa10.38□□□□□ -0.75
USP44-207ENST00000552237 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
USP44-207ENST00000552237 Q3C1V9 767 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms