RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 MYO5BQ9ULV0 1848 aa8.86□□□□□ -0.99
CCDC65-204ENST00000552188 PTPRTO14522 1441 aa8.86□□□□□ -0.99
CCDC65-204ENST00000552188 NUP155O75694 1391 aa8.86□□□□□ -0.99
CCDC65-204ENST00000552188 E9PCH4 1651 aa8.85□□□□□ -0.99
CCDC65-204ENST00000552188 TRIM52Q96A61 297 aa8.85□□□□□ -0.99
CCDC65-204ENST00000552188 SPDYE2BA6NHP3 402 aa8.84□□□□□ -0.99
CCDC65-204ENST00000552188 SPDYE6P0CI01 402 aa8.84□□□□□ -0.99
CCDC65-204ENST00000552188 SPDYE2Q495Y8 402 aa8.84□□□□□ -0.99
CCDC65-204ENST00000552188 KDM5AP29375 1690 aaKnown RBP8.84□□□□□ -0.99
CCDC65-204ENST00000552188 RPRD2Q5VT52 1461 aaKnown RBP8.83□□□□□ -1
CCDC65-204ENST00000552188 SPHKAPQ2M3C7 1700 aa8.83□□□□□ -1
CCDC65-204ENST00000552188 CHGAP10645 457 aaKnown RBP8.83□□□□□ -1
CCDC65-204ENST00000552188 EID1Q9Y6B2 187 aa8.83□□□□□ -1
CCDC65-204ENST00000552188 IQGAP1P46940 1657 aa8.83□□□□□ -1
CCDC65-204ENST00000552188 SYNMO15061 1565 aa8.82□□□□□ -1
CCDC65-204ENST00000552188 CERKQ8TCT0 537 aa8.82□□□□□ -1
CCDC65-204ENST00000552188 KIF1BO60333 1816 aa8.82□□□□□ -1
CCDC65-204ENST00000552188 NAIPQ13075 1403 aa8.81□□□□□ -1
CCDC65-204ENST00000552188 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
CCDC65-204ENST00000552188 TXNDC2Q86VQ3 553 aa8.81□□□□□ -1
CCDC65-204ENST00000552188 BCANQ96GW7 911 aa8.81□□□□□ -1
CCDC65-204ENST00000552188 SLC52A1Q9NWF4 448 aa8.81□□□□□ -1
CCDC65-204ENST00000552188 HDGFP51858 240 aaKnown RBP8.8□□□□□ -1
CCDC65-204ENST00000552188 IDI1Q13907 227 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 FBXO41Q8TF61 875 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 NEURL4Q96JN8 1562 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 ADGRB3O60242 1522 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 HFM1A2PYH4 1435 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 NPHP4O75161 1426 aaPredicted RBP8.8□□□□□ -1
CCDC65-204ENST00000552188 NOS1P29475 1434 aa8.8□□□□□ -1
CCDC65-204ENST00000552188 SCAF11Q99590 1463 aaKnown RBP8.78□□□□□ -1
CCDC65-204ENST00000552188 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
CCDC65-204ENST00000552188 SSUH2Q9Y2M2 353 aa8.78□□□□□ -1
CCDC65-204ENST00000552188 SLIT1O75093 1534 aa8.78□□□□□ -1
CCDC65-204ENST00000552188 ZNF335Q9H4Z2 1342 aaPredicted RBP8.78□□□□□ -1
CCDC65-204ENST00000552188 MED14O60244 1454 aa8.77□□□□□ -1
CCDC65-204ENST00000552188 TMEM131LA2VDJ0 1609 aa8.77□□□□□ -1.01
CCDC65-204ENST00000552188 RBM42Q9BTD8 480 aaKnown RBP8.77□□□□□ -1.01
CCDC65-204ENST00000552188 ACIN1Q9UKV3 1341 aaKnown RBP8.77□□□□□ -1.01
CCDC65-204ENST00000552188 LTBP4Q8N2S1 1624 aa8.76□□□□□ -1.01
CCDC65-204ENST00000552188 TMEM2Q9UHN6 1383 aa8.76□□□□□ -1.01
CCDC65-204ENST00000552188 ZNF326Q5BKZ1 582 aaKnown RBP8.76□□□□□ -1.01
CCDC65-204ENST00000552188 ARHGAP23Q9P227 1491 aa8.76□□□□□ -1.01
CCDC65-204ENST00000552188 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
CCDC65-204ENST00000552188 LTKP29376 864 aa8.75□□□□□ -1.01
CCDC65-204ENST00000552188 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.75□□□□□ -1.01
CCDC65-204ENST00000552188 CPS1P31327 1500 aa8.75□□□□□ -1.01
CCDC65-204ENST00000552188 RIMS2Q9UQ26 1411 aa8.74□□□□□ -1.01
CCDC65-204ENST00000552188 PROM2Q8N271 834 aa8.74□□□□□ -1.01
CCDC65-204ENST00000552188 IQSEC2Q5JU85 1478 aa8.74□□□□□ -1.01
CCDC65-204ENST00000552188 STRCP1A6NGW2 1772 aa8.73□□□□□ -1.01
CCDC65-204ENST00000552188 CLTCL1P53675 1640 aa8.73□□□□□ -1.01
CCDC65-204ENST00000552188 TRPM2O94759 1503 aa8.73□□□□□ -1.01
CCDC65-204ENST00000552188 UBAP1LF5GYI3 381 aa8.72□□□□□ -1.01
CCDC65-204ENST00000552188 NUTM2DQ5VT03 806 aaPredicted RBP8.72□□□□□ -1.01
CCDC65-204ENST00000552188 SLC26A8Q96RN1 970 aa8.72□□□□□ -1.01
CCDC65-204ENST00000552188 CHD2O14647 1828 aaKnown RBP8.72□□□□□ -1.01
CCDC65-204ENST00000552188 MPHOSPH9Q99550 1183 aa8.71□□□□□ -1.02
CCDC65-204ENST00000552188 RAB3GAP2Q9H2M9 1393 aa8.7□□□□□ -1.02
CCDC65-204ENST00000552188 PLEKHG1Q9ULL1 1385 aa8.7□□□□□ -1.02
CCDC65-204ENST00000552188 ZFYVE9O95405 1425 aa8.7□□□□□ -1.02
CCDC65-204ENST00000552188 XIRP1Q702N8 1843 aaKnown RBP8.69□□□□□ -1.02
CCDC65-204ENST00000552188 TOM1O60784 492 aa8.69□□□□□ -1.02
CCDC65-204ENST00000552188 CCDC144AA2RUR9 1427 aa8.69□□□□□ -1.02
CCDC65-204ENST00000552188 PPLO60437 1756 aa8.68□□□□□ -1.02
CCDC65-204ENST00000552188 PIP4K2BP78356 416 aa8.68□□□□□ -1.02
CCDC65-204ENST00000552188 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
CCDC65-204ENST00000552188 AKT1S1Q96B36 256 aa8.68□□□□□ -1.02
CCDC65-204ENST00000552188 DIP2AQ14689 1571 aa8.68□□□□□ -1.02
CCDC65-204ENST00000552188 KCNA6P17658 529 aa8.67□□□□□ -1.02
CCDC65-204ENST00000552188 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
CCDC65-204ENST00000552188 NEXMIFQ5QGS0 1516 aa8.66□□□□□ -1.02
CCDC65-204ENST00000552188 VGFO15240 615 aaPredicted RBP8.66□□□□□ -1.02
CCDC65-204ENST00000552188 RGL3Q3MIN7 710 aa8.66□□□□□ -1.02
CCDC65-204ENST00000552188 C14orf37Q86TY3 774 aa8.66□□□□□ -1.02
CCDC65-204ENST00000552188 TBX22Q9Y458 520 aa8.66□□□□□ -1.02
CCDC65-204ENST00000552188 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
CCDC65-204ENST00000552188 RPGRIP1LQ68CZ1 1315 aa8.65□□□□□ -1.02
CCDC65-204ENST00000552188 IFT172Q9UG01 1749 aa8.65□□□□□ -1.03
CCDC65-204ENST00000552188 HRCP23327 699 aa8.64□□□□□ -1.03
CCDC65-204ENST00000552188 FBXO3Q9UK99 471 aa8.64□□□□□ -1.03
CCDC65-204ENST00000552188 SETBP1Q9Y6X0 1596 aa8.64□□□□□ -1.03
CCDC65-204ENST00000552188 NKTRP30414 1462 aaKnown RBP8.64□□□□□ -1.03
CCDC65-204ENST00000552188 PIK3R4Q99570 1358 aa8.63□□□□□ -1.03
CCDC65-204ENST00000552188 NRXN3Q9Y4C0 1643 aa8.63□□□□□ -1.03
CCDC65-204ENST00000552188 REM2Q8IYK8 340 aaPredicted RBP8.63□□□□□ -1.03
CCDC65-204ENST00000552188 RBM33Q96EV2 1170 aaKnown RBP8.63□□□□□ -1.03
CCDC65-204ENST00000552188 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
CCDC65-204ENST00000552188 MSH6P52701 1360 aa8.62□□□□□ -1.03
CCDC65-204ENST00000552188 TMEM94Q12767 1356 aa8.62□□□□□ -1.03
CCDC65-204ENST00000552188 CLEC11AQ9Y240 323 aa8.62□□□□□ -1.03
CCDC65-204ENST00000552188 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
CCDC65-204ENST00000552188 ALKQ9UM73 1620 aa8.61□□□□□ -1.03
CCDC65-204ENST00000552188 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.6□□□□□ -1.03
CCDC65-204ENST00000552188 SETD1AO15047 1707 aaKnown RBP8.6□□□□□ -1.03
CCDC65-204ENST00000552188 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
CCDC65-204ENST00000552188 ANKRD30BQ9BXX2 1392 aa8.6□□□□□ -1.03
CCDC65-204ENST00000552188 ATF3P18847 181 aa8.59□□□□□ -1.03
CCDC65-204ENST00000552188 ROBO1Q9Y6N7 1651 aa8.59□□□□□ -1.03
CCDC65-204ENST00000552188 SPATA31E1Q6ZUB1 1445 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms