RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 IDI1Q13907 227 aa16.74■□□□□ 0.27
SLC48A1-209ENST00000552003 NUTM2DQ5VT03 806 aaPredicted RBP16.74■□□□□ 0.27
SLC48A1-209ENST00000552003 QTRT2Q9H974 415 aaKnown RBP16.74■□□□□ 0.27
SLC48A1-209ENST00000552003 ZRANB1Q9UGI0 708 aa16.74■□□□□ 0.27
SLC48A1-209ENST00000552003 EHBP1L1Q8N3D4 1523 aa16.74■□□□□ 0.27
SLC48A1-209ENST00000552003 RBM6P78332 1123 aaKnown RBP16.73■□□□□ 0.27
SLC48A1-209ENST00000552003 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.72■□□□□ 0.27
SLC48A1-209ENST00000552003 TSPY4P0CV99 314 aa16.71■□□□□ 0.27
SLC48A1-209ENST00000552003 TSPY10P0CW01 314 aa16.71■□□□□ 0.27
SLC48A1-209ENST00000552003 BRINP3Q76B58 766 aa16.69■□□□□ 0.26
SLC48A1-209ENST00000552003 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
SLC48A1-209ENST00000552003 C8orf37Q96NL8 207 aa16.68■□□□□ 0.26
SLC48A1-209ENST00000552003 ATAD2Q6PL18 1390 aa16.66■□□□□ 0.26
SLC48A1-209ENST00000552003 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
SLC48A1-209ENST00000552003 NCOA3Q9Y6Q9 1424 aa16.65■□□□□ 0.26
SLC48A1-209ENST00000552003 ZFYVE9O95405 1425 aa16.63■□□□□ 0.25
SLC48A1-209ENST00000552003 CADPS2Q86UW7 1296 aa16.63■□□□□ 0.25
SLC48A1-209ENST00000552003 BCANQ96GW7 911 aa16.63■□□□□ 0.25
SLC48A1-209ENST00000552003 C19orf44Q9H6X5 657 aa16.63■□□□□ 0.25
SLC48A1-209ENST00000552003 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
SLC48A1-209ENST00000552003 MYO5BQ9ULV0 1848 aa16.62■□□□□ 0.25
SLC48A1-209ENST00000552003 ASXL1Q8IXJ9 1541 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 DUOX2Q9NRD8 1548 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 DDX17Q92841 729 aaKnown RBP16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 PNPLA6Q8IY17 1366 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 PLEKHG1Q9ULL1 1385 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 NOS1P29475 1434 aa16.61■□□□□ 0.25
SLC48A1-209ENST00000552003 ATF3P18847 181 aa16.6■□□□□ 0.25
SLC48A1-209ENST00000552003 C14orf37Q86TY3 774 aa16.6■□□□□ 0.25
SLC48A1-209ENST00000552003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.6■□□□□ 0.25
SLC48A1-209ENST00000552003 TBX22Q9Y458 520 aa16.58■□□□□ 0.24
SLC48A1-209ENST00000552003 ADAMTS13Q76LX8 1427 aa16.58■□□□□ 0.24
SLC48A1-209ENST00000552003 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
SLC48A1-209ENST00000552003 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
SLC48A1-209ENST00000552003 LRP5O75197 1615 aa16.56■□□□□ 0.24
SLC48A1-209ENST00000552003 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
SLC48A1-209ENST00000552003 MST1RQ04912 1400 aa16.55■□□□□ 0.24
SLC48A1-209ENST00000552003 PTPRUQ92729 1446 aa16.55■□□□□ 0.24
SLC48A1-209ENST00000552003 LRRC59Q96AG4 307 aaKnown RBP16.55■□□□□ 0.24
SLC48A1-209ENST00000552003 RIMS2Q9UQ26 1411 aa16.54■□□□□ 0.24
SLC48A1-209ENST00000552003 FOXD1Q16676 465 aa16.54■□□□□ 0.24
SLC48A1-209ENST00000552003 KIF15Q9NS87 1388 aa16.53■□□□□ 0.24
SLC48A1-209ENST00000552003 ATRNO75882 1429 aa16.53■□□□□ 0.24
SLC48A1-209ENST00000552003 ERBINQ96RT1 1412 aa16.53■□□□□ 0.24
SLC48A1-209ENST00000552003 CCDC125Q86Z20 511 aa16.52■□□□□ 0.24
SLC48A1-209ENST00000552003 RRP7BPQ9NSQ0 103 aa16.52■□□□□ 0.24
SLC48A1-209ENST00000552003 USP21Q9UK80 565 aa16.52■□□□□ 0.24
SLC48A1-209ENST00000552003 DEFB132Q7Z7B7 95 aa16.51■□□□□ 0.23
SLC48A1-209ENST00000552003 FNBP4Q8N3X1 1017 aaPredicted RBP16.51■□□□□ 0.23
SLC48A1-209ENST00000552003 GCC2Q8IWJ2 1684 aa16.5■□□□□ 0.23
SLC48A1-209ENST00000552003 TMEM131LA2VDJ0 1609 aa16.5■□□□□ 0.23
SLC48A1-209ENST00000552003 SLC52A1Q9NWF4 448 aa16.5■□□□□ 0.23
SLC48A1-209ENST00000552003 TRPC5Q9UL62 973 aaPredicted RBP16.5■□□□□ 0.23
SLC48A1-209ENST00000552003 AMOTL2Q9Y2J4 779 aa16.49■□□□□ 0.23
SLC48A1-209ENST00000552003 DCCP43146 1447 aa16.48■□□□□ 0.23
SLC48A1-209ENST00000552003 PPP1R15AO75807 674 aaPredicted RBP16.48■□□□□ 0.23
SLC48A1-209ENST00000552003 PIK3R4Q99570 1358 aa16.47■□□□□ 0.23
SLC48A1-209ENST00000552003 ABCC5O15440 1437 aa16.46■□□□□ 0.23
SLC48A1-209ENST00000552003 KANK1Q14678 1352 aa16.46■□□□□ 0.23
SLC48A1-209ENST00000552003 BCL9LQ86UU0 1499 aa16.46■□□□□ 0.23
SLC48A1-209ENST00000552003 TRPM2O94759 1503 aa16.45■□□□□ 0.22
SLC48A1-209ENST00000552003 BLMP54132 1417 aaPredicted RBP16.44■□□□□ 0.22
SLC48A1-209ENST00000552003 MYOM3Q5VTT5 1437 aa16.44■□□□□ 0.22
SLC48A1-209ENST00000552003 CROCC2H7BZ55 1655 aa16.43■□□□□ 0.22
SLC48A1-209ENST00000552003 XRN1Q8IZH2 1706 aaKnown RBP16.43■□□□□ 0.22
SLC48A1-209ENST00000552003 PSDA5PKW4 1024 aaPredicted RBP16.43■□□□□ 0.22
SLC48A1-209ENST00000552003 BRWD3Q6RI45 1802 aa16.42■□□□□ 0.22
SLC48A1-209ENST00000552003 LAMC1P11047 1609 aa16.41■□□□□ 0.22
SLC48A1-209ENST00000552003 HRCP23327 699 aa16.41■□□□□ 0.22
SLC48A1-209ENST00000552003 PTCH1Q13635 1447 aa16.41■□□□□ 0.22
SLC48A1-209ENST00000552003 SOS2Q07890 1332 aaPredicted RBP16.4■□□□□ 0.22
SLC48A1-209ENST00000552003 UNC13BO14795 1591 aa16.39■□□□□ 0.21
SLC48A1-209ENST00000552003 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
SLC48A1-209ENST00000552003 KANK4Q5T7N3 995 aaPredicted RBP16.39■□□□□ 0.21
SLC48A1-209ENST00000552003 GJD4Q96KN9 370 aaPredicted RBP16.39■□□□□ 0.21
SLC48A1-209ENST00000552003 GLI3P10071 1580 aa16.38■□□□□ 0.21
SLC48A1-209ENST00000552003 HDGFP51858 240 aaKnown RBP16.38■□□□□ 0.21
SLC48A1-209ENST00000552003 NALCNQ8IZF0 1738 aa16.38■□□□□ 0.21
SLC48A1-209ENST00000552003 COL22A1Q8NFW1 1626 aaPredicted RBP16.37■□□□□ 0.21
SLC48A1-209ENST00000552003 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
SLC48A1-209ENST00000552003 MYOM2P54296 1465 aa16.36■□□□□ 0.21
SLC48A1-209ENST00000552003 C1orf167Q5SNV9 1468 aa16.36■□□□□ 0.21
SLC48A1-209ENST00000552003 ORAI2Q96SN7 254 aa16.36■□□□□ 0.21
SLC48A1-209ENST00000552003 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
SLC48A1-209ENST00000552003 RPRD2Q5VT52 1461 aaKnown RBP16.35■□□□□ 0.21
SLC48A1-209ENST00000552003 CHGAP10645 457 aaKnown RBP16.35■□□□□ 0.21
SLC48A1-209ENST00000552003 MARF1Q9Y4F3 1742 aaKnown RBP16.34■□□□□ 0.21
SLC48A1-209ENST00000552003 METP08581 1390 aa16.34■□□□□ 0.21
SLC48A1-209ENST00000552003 DAPK1P53355 1430 aa16.34■□□□□ 0.21
SLC48A1-209ENST00000552003 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
SLC48A1-209ENST00000552003 CHIC2Q9UKJ5 165 aa16.33■□□□□ 0.2
SLC48A1-209ENST00000552003 YY1P25490 414 aa16.31■□□□□ 0.2
SLC48A1-209ENST00000552003 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
SLC48A1-209ENST00000552003 SPHKAPQ2M3C7 1700 aa16.29■□□□□ 0.2
SLC48A1-209ENST00000552003 PTPN23Q9H3S7 1636 aa16.28■□□□□ 0.2
SLC48A1-209ENST00000552003 SLIT2O94813 1529 aa16.27■□□□□ 0.2
SLC48A1-209ENST00000552003 ANKRD30AQ9BXX3 1397 aa16.26■□□□□ 0.19
SLC48A1-209ENST00000552003 UNC5CLQ8IV45 518 aa16.26■□□□□ 0.19
SLC48A1-209ENST00000552003 SEPT12Q8IYM1 358 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms