RNA–Protein interactions for RNA: ENST00000551551.1

ATXN2-223, Transcript of ataxin 2, human

TSL 2

Gene ATXN2, Length 1,256 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN2-223	ENST00000551551	CFAP65	Q6ZU64	1925 aa	Known RBP	13.46	□□□□□ -0.25
ATXN2-223	ENST00000551551	CHGA	P10645	457 aa	Known RBP	13.45	□□□□□ -0.26
ATXN2-223	ENST00000551551	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.45	□□□□□ -0.26
ATXN2-223	ENST00000551551	IQGAP3	Q86VI3	1631 aa		13.45	□□□□□ -0.26
ATXN2-223	ENST00000551551	NAIP	Q13075	1403 aa		13.45	□□□□□ -0.26
ATXN2-223	ENST00000551551	IQGAP1	P46940	1657 aa		13.44	□□□□□ -0.26
ATXN2-223	ENST00000551551	GCC2	Q8IWJ2	1684 aa		13.44	□□□□□ -0.26
ATXN2-223	ENST00000551551	PIK3R4	Q99570	1358 aa		13.44	□□□□□ -0.26
ATXN2-223	ENST00000551551	RPGRIP1L	Q68CZ1	1315 aa		13.43	□□□□□ -0.26
ATXN2-223	ENST00000551551	VGF	O15240	615 aa	Predicted RBP	13.43	□□□□□ -0.26
ATXN2-223	ENST00000551551	HRC	P23327	699 aa		13.43	□□□□□ -0.26
ATXN2-223	ENST00000551551	NEURL4	Q96JN8	1562 aa		13.43	□□□□□ -0.26
ATXN2-223	ENST00000551551	PLEKHG1	Q9ULL1	1385 aa		13.43	□□□□□ -0.26
ATXN2-223	ENST00000551551	CACNB1	Q02641	598 aa	Predicted RBP	13.42	□□□□□ -0.26
ATXN2-223	ENST00000551551	ADGRB3	O60242	1522 aa		13.42	□□□□□ -0.26
ATXN2-223	ENST00000551551	NCOA3	Q9Y6Q9	1424 aa		13.41	□□□□□ -0.26
ATXN2-223	ENST00000551551	DCAF8L1	A6NGE4	600 aa		13.41	□□□□□ -0.26
ATXN2-223	ENST00000551551	PIK3C2B	O00750	1634 aa		13.41	□□□□□ -0.26
ATXN2-223	ENST00000551551	RIMS2	Q9UQ26	1411 aa		13.4	□□□□□ -0.26
ATXN2-223	ENST00000551551	ZNF326	Q5BKZ1	582 aa	Known RBP	13.4	□□□□□ -0.26
ATXN2-223	ENST00000551551	PROSER2	Q86WR7	435 aa	Predicted RBP	13.4	□□□□□ -0.26
ATXN2-223	ENST00000551551	PPP4R3CP	Q6ZMV5	832 aa		13.39	□□□□□ -0.27
ATXN2-223	ENST00000551551	SYNM	O15061	1565 aa		13.39	□□□□□ -0.27
ATXN2-223	ENST00000551551	SLC26A8	Q96RN1	970 aa		13.38	□□□□□ -0.27
ATXN2-223	ENST00000551551	STAC3	Q96MF2	364 aa		13.37	□□□□□ -0.27
ATXN2-223	ENST00000551551	ZFYVE9	O95405	1425 aa		13.37	□□□□□ -0.27
ATXN2-223	ENST00000551551	TMEM131L	A2VDJ0	1609 aa		13.35	□□□□□ -0.27
ATXN2-223	ENST00000551551		E9PCH4	1651 aa		13.35	□□□□□ -0.27
ATXN2-223	ENST00000551551	MPHOSPH9	Q99550	1183 aa		13.35	□□□□□ -0.27
ATXN2-223	ENST00000551551	NKTR	P30414	1462 aa	Known RBP	13.35	□□□□□ -0.27
ATXN2-223	ENST00000551551	LRRC7	Q96NW7	1537 aa		13.34	□□□□□ -0.27
ATXN2-223	ENST00000551551	SETD5	Q9C0A6	1442 aa		13.34	□□□□□ -0.27
ATXN2-223	ENST00000551551	PIP4K2B	P78356	416 aa		13.34	□□□□□ -0.27
ATXN2-223	ENST00000551551	CADPS2	Q86UW7	1296 aa		13.34	□□□□□ -0.27
ATXN2-223	ENST00000551551	C19orf44	Q9H6X5	657 aa		13.34	□□□□□ -0.27
ATXN2-223	ENST00000551551	MSH6	P52701	1360 aa		13.33	□□□□□ -0.27
ATXN2-223	ENST00000551551	DIP2A	Q14689	1571 aa		13.32	□□□□□ -0.28
ATXN2-223	ENST00000551551	ATF3	P18847	181 aa		13.31	□□□□□ -0.28
ATXN2-223	ENST00000551551	C14orf37	Q86TY3	774 aa		13.31	□□□□□ -0.28
ATXN2-223	ENST00000551551	TMEM94	Q12767	1356 aa		13.31	□□□□□ -0.28
ATXN2-223	ENST00000551551	CCDC144A	A2RUR9	1427 aa		13.3	□□□□□ -0.28
ATXN2-223	ENST00000551551	FAM135B	Q49AJ0	1406 aa		13.3	□□□□□ -0.28
ATXN2-223	ENST00000551551	TRPM2	O94759	1503 aa		13.3	□□□□□ -0.28
ATXN2-223	ENST00000551551	ANKRD30B	Q9BXX2	1392 aa		13.3	□□□□□ -0.28
ATXN2-223	ENST00000551551	SLAIN2	Q9P270	581 aa		13.29	□□□□□ -0.28
ATXN2-223	ENST00000551551	AMOTL2	Q9Y2J4	779 aa		13.29	□□□□□ -0.28
ATXN2-223	ENST00000551551	SPHKAP	Q2M3C7	1700 aa		13.28	□□□□□ -0.28
ATXN2-223	ENST00000551551	HOXD11	P31277	338 aa	Predicted RBP	13.25	□□□□□ -0.29
ATXN2-223	ENST00000551551	HSPA1L	P34931	641 aa		13.25	□□□□□ -0.29
ATXN2-223	ENST00000551551	KIF1B	O60333	1816 aa		13.25	□□□□□ -0.29
ATXN2-223	ENST00000551551	ADAMTS13	Q76LX8	1427 aa		13.24	□□□□□ -0.29
ATXN2-223	ENST00000551551	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.24	□□□□□ -0.29
ATXN2-223	ENST00000551551	NWD1	Q149M9	1564 aa		13.24	□□□□□ -0.29
ATXN2-223	ENST00000551551	SETBP1	Q9Y6X0	1596 aa		13.24	□□□□□ -0.29
ATXN2-223	ENST00000551551	DISP3	Q9P2K9	1392 aa		13.23	□□□□□ -0.29
ATXN2-223	ENST00000551551	DCC	P43146	1447 aa		13.22	□□□□□ -0.29
ATXN2-223	ENST00000551551	RTN4	Q9NQC3	1192 aa	Known RBP	13.22	□□□□□ -0.29
ATXN2-223	ENST00000551551	CHD2	O14647	1828 aa	Known RBP	13.22	□□□□□ -0.29
ATXN2-223	ENST00000551551	RAB3GAP2	Q9H2M9	1393 aa		13.21	□□□□□ -0.29
ATXN2-223	ENST00000551551	SIRT1	Q96EB6	747 aa		13.21	□□□□□ -0.29
ATXN2-223	ENST00000551551	RGL3	Q3MIN7	710 aa		13.2	□□□□□ -0.3
ATXN2-223	ENST00000551551	CNKSR2	Q8WXI2	1034 aa		13.19	□□□□□ -0.3
ATXN2-223	ENST00000551551	STRCP1	A6NGW2	1772 aa		13.19	□□□□□ -0.3
ATXN2-223	ENST00000551551	MYO5B	Q9ULV0	1848 aa		13.18	□□□□□ -0.3
ATXN2-223	ENST00000551551	CLTCL1	P53675	1640 aa		13.17	□□□□□ -0.3
ATXN2-223	ENST00000551551	NEXMIF	Q5QGS0	1516 aa		13.17	□□□□□ -0.3
ATXN2-223	ENST00000551551	MET	P08581	1390 aa		13.17	□□□□□ -0.3
ATXN2-223	ENST00000551551	PRAG1	Q86YV5	1406 aa		13.16	□□□□□ -0.3
ATXN2-223	ENST00000551551	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.16	□□□□□ -0.3
ATXN2-223	ENST00000551551	SPATA31E1	Q6ZUB1	1445 aa		13.15	□□□□□ -0.3
ATXN2-223	ENST00000551551	LRRC59	Q96AG4	307 aa	Known RBP	13.15	□□□□□ -0.3
ATXN2-223	ENST00000551551	C14orf93	Q9H972	538 aa	Known RBP	13.15	□□□□□ -0.3
ATXN2-223	ENST00000551551	DHX57	Q6P158	1386 aa	Known RBP	13.15	□□□□□ -0.3
ATXN2-223	ENST00000551551	SPATA31A6	Q5VVP1	1343 aa		13.14	□□□□□ -0.31
ATXN2-223	ENST00000551551	PTCH1	Q13635	1447 aa		13.14	□□□□□ -0.31
ATXN2-223	ENST00000551551	ABCC11	Q96J66	1382 aa		13.14	□□□□□ -0.31
ATXN2-223	ENST00000551551	JCAD	Q9P266	1359 aa		13.14	□□□□□ -0.31
ATXN2-223	ENST00000551551	RBM33	Q96EV2	1170 aa	Known RBP	13.13	□□□□□ -0.31
ATXN2-223	ENST00000551551	LRPPRC	P42704	1394 aa	Known RBP	13.12	□□□□□ -0.31
ATXN2-223	ENST00000551551	RNF39	Q9H2S5	420 aa		13.12	□□□□□ -0.31
ATXN2-223	ENST00000551551	ALK	Q9UM73	1620 aa		13.12	□□□□□ -0.31
ATXN2-223	ENST00000551551	PTPRU	Q92729	1446 aa		13.12	□□□□□ -0.31
ATXN2-223	ENST00000551551	ADGRL3	Q9HAR2	1447 aa		13.11	□□□□□ -0.31
ATXN2-223	ENST00000551551	ADGRF5	Q8IZF2	1346 aa		13.11	□□□□□ -0.31
ATXN2-223	ENST00000551551	RNF216	Q9NWF9	866 aa	Predicted RBP	13.1	□□□□□ -0.31
ATXN2-223	ENST00000551551	XIRP1	Q702N8	1843 aa	Known RBP	13.09	□□□□□ -0.31
ATXN2-223	ENST00000551551	SOCS7	O14512	581 aa		13.09	□□□□□ -0.31
ATXN2-223	ENST00000551551	BRINP3	Q76B58	766 aa		13.09	□□□□□ -0.31
ATXN2-223	ENST00000551551	PIK3C2G	O75747	1445 aa		13.08	□□□□□ -0.32
ATXN2-223	ENST00000551551	DCAF11	Q8TEB1	546 aa		13.08	□□□□□ -0.32
ATXN2-223	ENST00000551551	NRXN3	Q9Y4C0	1643 aa		13.08	□□□□□ -0.32
ATXN2-223	ENST00000551551	MYOM2	P54296	1465 aa		13.08	□□□□□ -0.32
ATXN2-223	ENST00000551551	XRN1	Q8IZH2	1706 aa	Known RBP	13.08	□□□□□ -0.32
ATXN2-223	ENST00000551551	PPL	O60437	1756 aa		13.07	□□□□□ -0.32
ATXN2-223	ENST00000551551	TECPR2	O15040	1411 aa		13.07	□□□□□ -0.32
ATXN2-223	ENST00000551551	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.07	□□□□□ -0.32
ATXN2-223	ENST00000551551	ROBO1	Q9Y6N7	1651 aa		13.06	□□□□□ -0.32
ATXN2-223	ENST00000551551	ZNF772	Q68DY9	489 aa	Predicted RBP	13.06	□□□□□ -0.32
ATXN2-223	ENST00000551551	POGK	Q9P215	609 aa		13.06	□□□□□ -0.32
ATXN2-223	ENST00000551551	STK26	Q9P289	416 aa		13.06	□□□□□ -0.32

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