RNA–Protein interactions for RNA: ENST00000550811.1

TUBA1A-208, Transcript of tubulin alpha 1a, human

TSL 4

Gene TUBA1A, Length 650 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBA1A-208	ENST00000550811	ANKRD30B	Q9BXX2	1392 aa		13.91	□□□□□ -0.18
TUBA1A-208	ENST00000550811	PTPRM	P28827	1452 aa		13.91	□□□□□ -0.18
TUBA1A-208	ENST00000550811	CLSPN	Q9HAW4	1339 aa		13.9	□□□□□ -0.18
TUBA1A-208	ENST00000550811	PIK3C2B	O00750	1634 aa		13.9	□□□□□ -0.18
TUBA1A-208	ENST00000550811	PLA2R1	Q13018	1463 aa		13.9	□□□□□ -0.18
TUBA1A-208	ENST00000550811	CCDC144A	A2RUR9	1427 aa		13.9	□□□□□ -0.19
TUBA1A-208	ENST00000550811	MKRN4P	Q13434	485 aa	Predicted RBP	13.89	□□□□□ -0.19
TUBA1A-208	ENST00000550811	UGGT1	Q9NYU2	1555 aa		13.88	□□□□□ -0.19
TUBA1A-208	ENST00000550811	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.88	□□□□□ -0.19
TUBA1A-208	ENST00000550811	MYO3A	Q8NEV4	1616 aa		13.88	□□□□□ -0.19
TUBA1A-208	ENST00000550811	TNR	Q92752	1358 aa		13.87	□□□□□ -0.19
TUBA1A-208	ENST00000550811	KIF1B	O60333	1816 aa		13.87	□□□□□ -0.19
TUBA1A-208	ENST00000550811	CEBPA	P49715	358 aa	Predicted RBP	13.86	□□□□□ -0.19
TUBA1A-208	ENST00000550811	FBXO31	Q5XUX0	539 aa	Predicted RBP	13.86	□□□□□ -0.19
TUBA1A-208	ENST00000550811	KDM4F	A0A1W2PPD8	638 aa		13.85	□□□□□ -0.19
TUBA1A-208	ENST00000550811	NLRP1	Q9C000	1473 aa		13.85	□□□□□ -0.19
TUBA1A-208	ENST00000550811	ZNF142	P52746	1687 aa	Predicted RBP	13.85	□□□□□ -0.19
TUBA1A-208	ENST00000550811	ADGRB3	O60242	1522 aa		13.84	□□□□□ -0.19
TUBA1A-208	ENST00000550811	NEURL4	Q96JN8	1562 aa		13.83	□□□□□ -0.19
TUBA1A-208	ENST00000550811	KDM5A	P29375	1690 aa	Known RBP	13.83	□□□□□ -0.2
TUBA1A-208	ENST00000550811	SETD1B	Q9UPS6	1966 aa	Known RBP	13.82	□□□□□ -0.2
TUBA1A-208	ENST00000550811	SLC52A1	Q9NWF4	448 aa		13.82	□□□□□ -0.2
TUBA1A-208	ENST00000550811	MYO5B	Q9ULV0	1848 aa		13.82	□□□□□ -0.2
TUBA1A-208	ENST00000550811	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.82	□□□□□ -0.2
TUBA1A-208	ENST00000550811	TMEM131L	A2VDJ0	1609 aa		13.81	□□□□□ -0.2
TUBA1A-208	ENST00000550811	UBR1	Q8IWV7	1749 aa		13.81	□□□□□ -0.2
TUBA1A-208	ENST00000550811	DSG3	P32926	999 aa		13.8	□□□□□ -0.2
TUBA1A-208	ENST00000550811	BBX	Q8WY36	941 aa	Predicted RBP	13.8	□□□□□ -0.2
TUBA1A-208	ENST00000550811	A2ML1	A8K2U0	1454 aa		13.8	□□□□□ -0.2
TUBA1A-208	ENST00000550811	SIN3A	Q96ST3	1273 aa		13.79	□□□□□ -0.2
TUBA1A-208	ENST00000550811	SPATA31E1	Q6ZUB1	1445 aa		13.79	□□□□□ -0.2
TUBA1A-208	ENST00000550811	NEUROD1	Q13562	356 aa		13.78	□□□□□ -0.2
TUBA1A-208	ENST00000550811	IDI1	Q13907	227 aa		13.78	□□□□□ -0.2
TUBA1A-208	ENST00000550811	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.78	□□□□□ -0.2
TUBA1A-208	ENST00000550811	UHRF1BP1	Q6BDS2	1440 aa		13.78	□□□□□ -0.2
TUBA1A-208	ENST00000550811	TONSL	Q96HA7	1378 aa		13.77	□□□□□ -0.21
TUBA1A-208	ENST00000550811	IFT172	Q9UG01	1749 aa		13.77	□□□□□ -0.21
TUBA1A-208	ENST00000550811	TAOK2	Q9UL54	1235 aa		13.77	□□□□□ -0.21
TUBA1A-208	ENST00000550811	PPL	O60437	1756 aa		13.76	□□□□□ -0.21
TUBA1A-208	ENST00000550811	CHGA	P10645	457 aa	Known RBP	13.75	□□□□□ -0.21
TUBA1A-208	ENST00000550811	STAG3	Q9UJ98	1225 aa		13.75	□□□□□ -0.21
TUBA1A-208	ENST00000550811	NEXMIF	Q5QGS0	1516 aa		13.74	□□□□□ -0.21
TUBA1A-208	ENST00000550811	SPOCK2	Q92563	424 aa		13.73	□□□□□ -0.21
TUBA1A-208	ENST00000550811	MYOM2	P54296	1465 aa		13.72	□□□□□ -0.21
TUBA1A-208	ENST00000550811	SLIT1	O75093	1534 aa		13.71	□□□□□ -0.21
TUBA1A-208	ENST00000550811	POLA2	Q14181	598 aa		13.71	□□□□□ -0.21
TUBA1A-208	ENST00000550811	RGL3	Q3MIN7	710 aa		13.71	□□□□□ -0.21
TUBA1A-208	ENST00000550811	ZNF326	Q5BKZ1	582 aa	Known RBP	13.71	□□□□□ -0.21
TUBA1A-208	ENST00000550811	KLHL34	Q8N239	644 aa		13.71	□□□□□ -0.21
TUBA1A-208	ENST00000550811	LMTK3	Q96Q04	1460 aa		13.7	□□□□□ -0.22
TUBA1A-208	ENST00000550811	ARHGAP23	Q9P227	1491 aa		13.7	□□□□□ -0.22
TUBA1A-208	ENST00000550811	TIMELESS	Q9UNS1	1208 aa		13.7	□□□□□ -0.22
TUBA1A-208	ENST00000550811	ZFYVE9	O95405	1425 aa		13.7	□□□□□ -0.22
TUBA1A-208	ENST00000550811	RPGRIP1L	Q68CZ1	1315 aa		13.69	□□□□□ -0.22
TUBA1A-208	ENST00000550811	RIMS2	Q9UQ26	1411 aa		13.69	□□□□□ -0.22
TUBA1A-208	ENST00000550811	POLR1A	O95602	1720 aa	Predicted RBP	13.69	□□□□□ -0.22
TUBA1A-208	ENST00000550811	TMEM2	Q9UHN6	1383 aa		13.69	□□□□□ -0.22
TUBA1A-208	ENST00000550811	L3MBTL2	Q969R5	705 aa		13.68	□□□□□ -0.22
TUBA1A-208	ENST00000550811	CAPN15	O75808	1086 aa		13.67	□□□□□ -0.22
TUBA1A-208	ENST00000550811	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.67	□□□□□ -0.22
TUBA1A-208	ENST00000550811	NRXN1	Q9ULB1	1477 aa		13.67	□□□□□ -0.22
TUBA1A-208	ENST00000550811	ECM2	O94769	699 aa	Predicted RBP	13.66	□□□□□ -0.22
TUBA1A-208	ENST00000550811	ZEB1	P37275	1124 aa	Predicted RBP	13.66	□□□□□ -0.22
TUBA1A-208	ENST00000550811	DCAF11	Q8TEB1	546 aa		13.66	□□□□□ -0.22
TUBA1A-208	ENST00000550811	SCAF11	Q99590	1463 aa	Known RBP	13.66	□□□□□ -0.22
TUBA1A-208	ENST00000550811	STAC3	Q96MF2	364 aa		13.65	□□□□□ -0.22
TUBA1A-208	ENST00000550811	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.65	□□□□□ -0.22
TUBA1A-208	ENST00000550811	PRAG1	Q86YV5	1406 aa		13.64	□□□□□ -0.23
TUBA1A-208	ENST00000550811	LAMC1	P11047	1609 aa		13.64	□□□□□ -0.23
TUBA1A-208	ENST00000550811	IQGAP1	P46940	1657 aa		13.64	□□□□□ -0.23
TUBA1A-208	ENST00000550811	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.64	□□□□□ -0.23
TUBA1A-208	ENST00000550811	PIK3C2G	O75747	1445 aa		13.64	□□□□□ -0.23
TUBA1A-208	ENST00000550811	SETBP1	Q9Y6X0	1596 aa		13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	PPP1R15A	O75807	674 aa	Predicted RBP	13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	HDGF	P51858	240 aa	Known RBP	13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	KDM2A	Q9Y2K7	1162 aa		13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	KIAA1210	Q9ULL0	1709 aa		13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	TRPM1	Q7Z4N2	1603 aa		13.63	□□□□□ -0.23
TUBA1A-208	ENST00000550811	NRXN3	Q9Y4C0	1643 aa		13.62	□□□□□ -0.23
TUBA1A-208	ENST00000550811	VGF	O15240	615 aa	Predicted RBP	13.62	□□□□□ -0.23
TUBA1A-208	ENST00000550811	SP7	Q8TDD2	431 aa	Predicted RBP	13.62	□□□□□ -0.23
TUBA1A-208	ENST00000550811	EID1	Q9Y6B2	187 aa		13.62	□□□□□ -0.23
TUBA1A-208	ENST00000550811	PLEKHG1	Q9ULL1	1385 aa		13.61	□□□□□ -0.23
TUBA1A-208	ENST00000550811	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.61	□□□□□ -0.23
TUBA1A-208	ENST00000550811	ADGRF5	Q8IZF2	1346 aa		13.61	□□□□□ -0.23
TUBA1A-208	ENST00000550811	RALGAPB	Q86X10	1494 aa		13.61	□□□□□ -0.23
TUBA1A-208	ENST00000550811	SETD1A	O15047	1707 aa	Known RBP	13.6	□□□□□ -0.23
TUBA1A-208	ENST00000550811	DIP2A	Q14689	1571 aa		13.6	□□□□□ -0.23
TUBA1A-208	ENST00000550811	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.6	□□□□□ -0.23
TUBA1A-208	ENST00000550811	PRKCSH	P14314	528 aa	Predicted RBP	13.59	□□□□□ -0.23
TUBA1A-208	ENST00000550811	TXNDC2	Q86VQ3	553 aa		13.59	□□□□□ -0.23
TUBA1A-208	ENST00000550811	ANKLE2	Q86XL3	938 aa		13.59	□□□□□ -0.23
TUBA1A-208	ENST00000550811	LTK	P29376	864 aa		13.58	□□□□□ -0.24
TUBA1A-208	ENST00000550811	HSPA2	P54652	639 aa		13.58	□□□□□ -0.24
TUBA1A-208	ENST00000550811	MED14	O60244	1454 aa		13.58	□□□□□ -0.24
TUBA1A-208	ENST00000550811	STRC	Q7RTU9	1775 aa		13.58	□□□□□ -0.24
TUBA1A-208	ENST00000550811	ALK	Q9UM73	1620 aa		13.57	□□□□□ -0.24
TUBA1A-208	ENST00000550811	NPHP4	O75161	1426 aa	Predicted RBP	13.57	□□□□□ -0.24
TUBA1A-208	ENST00000550811	NBPF8	Q3BBV2	869 aa		13.57	□□□□□ -0.24
TUBA1A-208	ENST00000550811	SPRYD3	Q8NCJ5	442 aa		13.56	□□□□□ -0.24

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