RNA–Protein interactions for RNA: ENST00000550770.1

PRIM1-206, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-206ENST00000550770 PLA2R1Q13018 1463 aa17.12■□□□□ 0.33
PRIM1-206ENST00000550770 VWDEQ8N2E2 1590 aa17.12■□□□□ 0.33
PRIM1-206ENST00000550770 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
PRIM1-206ENST00000550770 MNX1P50219 401 aaPredicted RBP17.11■□□□□ 0.33
PRIM1-206ENST00000550770 PTPRTO14522 1441 aa17.11■□□□□ 0.33
PRIM1-206ENST00000550770 ANKRD50Q9ULJ7 1429 aa17.11■□□□□ 0.33
PRIM1-206ENST00000550770 ARHGAP31Q2M1Z3 1444 aa17.1■□□□□ 0.33
PRIM1-206ENST00000550770 NLRP1Q9C000 1473 aa17.1■□□□□ 0.33
PRIM1-206ENST00000550770 LMTK2Q8IWU2 1503 aa17.1■□□□□ 0.33
PRIM1-206ENST00000550770 CD44P16070 742 aaKnown RBP17.09■□□□□ 0.33
PRIM1-206ENST00000550770 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
PRIM1-206ENST00000550770 ROCK1Q13464 1354 aa17.09■□□□□ 0.33
PRIM1-206ENST00000550770 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
PRIM1-206ENST00000550770 KANK1Q14678 1352 aa17.08■□□□□ 0.32
PRIM1-206ENST00000550770 SP7Q8TDD2 431 aaPredicted RBP17.07■□□□□ 0.32
PRIM1-206ENST00000550770 ILDR1Q86SU0 546 aaPredicted RBP17.06■□□□□ 0.32
PRIM1-206ENST00000550770 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
PRIM1-206ENST00000550770 VASPP50552 380 aaPredicted RBP17.05■□□□□ 0.32
PRIM1-206ENST00000550770 UGGT1Q9NYU2 1555 aa17.05■□□□□ 0.32
PRIM1-206ENST00000550770 EFCAB6Q5THR3 1501 aa17.05■□□□□ 0.32
PRIM1-206ENST00000550770 UNC13BO14795 1591 aa17.04■□□□□ 0.32
PRIM1-206ENST00000550770 ITGAEP38570 1179 aa17.03■□□□□ 0.32
PRIM1-206ENST00000550770 EVX2Q03828 476 aa17.03■□□□□ 0.32
PRIM1-206ENST00000550770 PKD2Q13563 968 aa17.02■□□□□ 0.32
PRIM1-206ENST00000550770 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
PRIM1-206ENST00000550770 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
PRIM1-206ENST00000550770 POLR1AO95602 1720 aaPredicted RBP17.01■□□□□ 0.31
PRIM1-206ENST00000550770 UBR1Q8IWV7 1749 aa16.99■□□□□ 0.31
PRIM1-206ENST00000550770 LTBP4Q8N2S1 1624 aa16.99■□□□□ 0.31
PRIM1-206ENST00000550770 SYNMO15061 1565 aa16.98■□□□□ 0.31
PRIM1-206ENST00000550770 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
PRIM1-206ENST00000550770 TET3O43151 1660 aa16.98■□□□□ 0.31
PRIM1-206ENST00000550770 THEMISQ8N1K5 641 aaPredicted RBP16.98■□□□□ 0.31
PRIM1-206ENST00000550770 CERKQ8TCT0 537 aa16.98■□□□□ 0.31
PRIM1-206ENST00000550770 NOS1P29475 1434 aa16.97■□□□□ 0.31
PRIM1-206ENST00000550770 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
PRIM1-206ENST00000550770 RPRD2Q5VT52 1461 aaKnown RBP16.97■□□□□ 0.31
PRIM1-206ENST00000550770 PIK3C2BO00750 1634 aa16.96■□□□□ 0.31
PRIM1-206ENST00000550770 IQGAP3Q86VI3 1631 aa16.96■□□□□ 0.31
PRIM1-206ENST00000550770 GCC2Q8IWJ2 1684 aa16.95■□□□□ 0.3
PRIM1-206ENST00000550770 MED14O60244 1454 aa16.94■□□□□ 0.3
PRIM1-206ENST00000550770 ZRANB1Q9UGI0 708 aa16.94■□□□□ 0.3
PRIM1-206ENST00000550770 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
PRIM1-206ENST00000550770 SLIT1O75093 1534 aa16.93■□□□□ 0.3
PRIM1-206ENST00000550770 ANKLE2Q86XL3 938 aa16.93■□□□□ 0.3
PRIM1-206ENST00000550770 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
PRIM1-206ENST00000550770 KDM5AP29375 1690 aaKnown RBP16.92■□□□□ 0.3
PRIM1-206ENST00000550770 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
PRIM1-206ENST00000550770 NAIPQ13075 1403 aa16.92■□□□□ 0.3
PRIM1-206ENST00000550770 E9PCH4 1651 aa16.91■□□□□ 0.3
PRIM1-206ENST00000550770 NUP155O75694 1391 aa16.9■□□□□ 0.3
PRIM1-206ENST00000550770 IDI1Q13907 227 aa16.9■□□□□ 0.3
PRIM1-206ENST00000550770 KLHL34Q8N239 644 aa16.9■□□□□ 0.3
PRIM1-206ENST00000550770 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
PRIM1-206ENST00000550770 ADGRB3O60242 1522 aa16.9■□□□□ 0.3
PRIM1-206ENST00000550770 HFM1A2PYH4 1435 aa16.89■□□□□ 0.29
PRIM1-206ENST00000550770 SCAF11Q99590 1463 aaKnown RBP16.89■□□□□ 0.29
PRIM1-206ENST00000550770 IQSEC2Q5JU85 1478 aa16.88■□□□□ 0.29
PRIM1-206ENST00000550770 TMEM2Q9UHN6 1383 aa16.88■□□□□ 0.29
PRIM1-206ENST00000550770 SLC52A1Q9NWF4 448 aa16.87■□□□□ 0.29
PRIM1-206ENST00000550770 LTKP29376 864 aa16.86■□□□□ 0.29
PRIM1-206ENST00000550770 ZNF579Q8NAF0 562 aaKnown RBP16.84■□□□□ 0.29
PRIM1-206ENST00000550770 CLCN6P51797 869 aa16.83■□□□□ 0.28
PRIM1-206ENST00000550770 TXNDC2Q86VQ3 553 aa16.83■□□□□ 0.28
PRIM1-206ENST00000550770 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
PRIM1-206ENST00000550770 CPS1P31327 1500 aa16.82■□□□□ 0.28
PRIM1-206ENST00000550770 TSPYL2Q9H2G4 693 aaPredicted RBP16.82■□□□□ 0.28
PRIM1-206ENST00000550770 EID1Q9Y6B2 187 aa16.81■□□□□ 0.28
PRIM1-206ENST00000550770 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
PRIM1-206ENST00000550770 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
PRIM1-206ENST00000550770 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
PRIM1-206ENST00000550770 MYO5BQ9ULV0 1848 aa16.79■□□□□ 0.28
PRIM1-206ENST00000550770 STRCP1A6NGW2 1772 aa16.79■□□□□ 0.28
PRIM1-206ENST00000550770 NUBP1P53384 320 aa16.78■□□□□ 0.28
PRIM1-206ENST00000550770 GABBR2O75899 941 aa16.77■□□□□ 0.28
PRIM1-206ENST00000550770 RIMS2Q9UQ26 1411 aa16.76■□□□□ 0.27
PRIM1-206ENST00000550770 TRPM2O94759 1503 aa16.75■□□□□ 0.27
PRIM1-206ENST00000550770 IFNLR1Q8IU57 520 aaPredicted RBP16.74■□□□□ 0.27
PRIM1-206ENST00000550770 FAM212AQ96EL1 285 aa16.74■□□□□ 0.27
PRIM1-206ENST00000550770 CHGAP10645 457 aaKnown RBP16.73■□□□□ 0.27
PRIM1-206ENST00000550770 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
PRIM1-206ENST00000550770 LRRC7Q96NW7 1537 aa16.73■□□□□ 0.27
PRIM1-206ENST00000550770 CLTCL1P53675 1640 aa16.73■□□□□ 0.27
PRIM1-206ENST00000550770 PLEKHG1Q9ULL1 1385 aa16.72■□□□□ 0.27
PRIM1-206ENST00000550770 PHF12Q96QT6 1004 aa16.71■□□□□ 0.27
PRIM1-206ENST00000550770 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
PRIM1-206ENST00000550770 SLC26A8Q96RN1 970 aa16.7■□□□□ 0.26
PRIM1-206ENST00000550770 CCDC61Q9Y6R9 512 aa16.69■□□□□ 0.26
PRIM1-206ENST00000550770 NWD1Q149M9 1564 aa16.68■□□□□ 0.26
PRIM1-206ENST00000550770 ALKQ9UM73 1620 aa16.68■□□□□ 0.26
PRIM1-206ENST00000550770 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
PRIM1-206ENST00000550770 SPOCK2Q92563 424 aa16.68■□□□□ 0.26
PRIM1-206ENST00000550770 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
PRIM1-206ENST00000550770 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.67■□□□□ 0.26
PRIM1-206ENST00000550770 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
PRIM1-206ENST00000550770 ADAMTS13Q76LX8 1427 aa16.66■□□□□ 0.26
PRIM1-206ENST00000550770 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
PRIM1-206ENST00000550770 KCNA6P17658 529 aa16.65■□□□□ 0.26
PRIM1-206ENST00000550770 DCAF8Q5TAQ9 597 aa16.65■□□□□ 0.26
PRIM1-206ENST00000550770 XIRP1Q702N8 1843 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms