RNA–Protein interactions for RNA: ENST00000550590.5

PMEL-216, Transcript of premelanosome protein, humanhuman

TSL 2

Gene PMEL, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMEL-216ENST00000550590 TRIM44Q96DX7 344 aaPredicted RBP7.78□□□□□ -1.16
PMEL-216ENST00000550590 NCOA1Q15788 1441 aa7.78□□□□□ -1.16
PMEL-216ENST00000550590 SCAPERQ9BY12 1400 aa7.78□□□□□ -1.16
PMEL-216ENST00000550590 INSRP06213 1382 aa7.77□□□□□ -1.17
PMEL-216ENST00000550590 LETM1O95202 739 aaPredicted RBP7.77□□□□□ -1.17
PMEL-216ENST00000550590 CHRM1P11229 460 aaPredicted RBP7.77□□□□□ -1.17
PMEL-216ENST00000550590 PDAP1Q13442 181 aaKnown RBP7.77□□□□□ -1.17
PMEL-216ENST00000550590 SIN3AQ96ST3 1273 aa7.77□□□□□ -1.17
PMEL-216ENST00000550590 MYH16Q9H6N6 1097 aa7.77□□□□□ -1.17
PMEL-216ENST00000550590 CABP2Q9NPB3 220 aa7.77□□□□□ -1.17
PMEL-216ENST00000550590 HS1BP3Q53T59 392 aa7.76□□□□□ -1.17
PMEL-216ENST00000550590 FTSJ3Q8IY81 847 aaKnown RBP7.76□□□□□ -1.17
PMEL-216ENST00000550590 CECR2Q9BXF3 1484 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 KTN1Q86UP2 1357 aaKnown RBP7.75□□□□□ -1.17
PMEL-216ENST00000550590 DYNC1I1O14576 645 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 PTMSP20962 102 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 TMEM92Q6UXU6 159 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 TEX2Q8IWB9 1127 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 POGKQ9P215 609 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 RAPGEF2Q9Y4G8 1499 aa7.75□□□□□ -1.17
PMEL-216ENST00000550590 CCDC7Q96M83 1385 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 ZMYM4Q5VZL5 1548 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 KDM5BQ9UGL1 1544 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 SLC20A2Q08357 652 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 KIAA1211Q6ZU35 1233 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 KLHL34Q8N239 644 aa7.74□□□□□ -1.17
PMEL-216ENST00000550590 ZMYM3Q14202 1370 aa7.73□□□□□ -1.17
PMEL-216ENST00000550590 POLR1AO95602 1720 aaPredicted RBP7.73□□□□□ -1.17
PMEL-216ENST00000550590 MYOM3Q5VTT5 1437 aa7.73□□□□□ -1.17
PMEL-216ENST00000550590 UACAQ9BZF9 1416 aa7.73□□□□□ -1.17
PMEL-216ENST00000550590 EIF4G2P78344 907 aaKnown RBP eCLIP7.73□□□□□ -1.17
PMEL-216ENST00000550590 PPP4R3BQ5MIZ7 849 aa7.73□□□□□ -1.17
PMEL-216ENST00000550590 KANK4Q5T7N3 995 aaPredicted RBP7.73□□□□□ -1.17
PMEL-216ENST00000550590 CENPQQ7L2Z9 268 aaPredicted RBP7.73□□□□□ -1.17
PMEL-216ENST00000550590 CCDC173Q0VFZ6 552 aa7.72□□□□□ -1.17
PMEL-216ENST00000550590 CSPP1Q1MSJ5 1256 aa7.72□□□□□ -1.17
PMEL-216ENST00000550590 IFFO2Q5TF58 517 aa7.72□□□□□ -1.17
PMEL-216ENST00000550590 ADGRD1Q6QNK2 874 aa7.72□□□□□ -1.17
PMEL-216ENST00000550590 CCDC94Q9BW85 323 aaPredicted RBP7.72□□□□□ -1.17
PMEL-216ENST00000550590 AXIN2Q9Y2T1 843 aa7.72□□□□□ -1.17
PMEL-216ENST00000550590 CCDC18Q5T9S5 1454 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 PRXQ9BXM0 1461 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 MCM5P33992 734 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 RIPK4P57078 832 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 ZSCAN30Q86W11 494 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 KHSRPQ92945 711 aaKnown RBP eCLIP7.71□□□□□ -1.18
PMEL-216ENST00000550590 GRPEL1Q9HAV7 217 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 TMEM51Q9NW97 253 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 KDM2BQ8NHM5 1336 aa7.71□□□□□ -1.18
PMEL-216ENST00000550590 ROCK2O75116 1388 aaKnown RBP7.71□□□□□ -1.18
PMEL-216ENST00000550590 LRPPRCP42704 1394 aaKnown RBP7.71□□□□□ -1.18
PMEL-216ENST00000550590 DDX11L8A8MPP1 907 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 HSPA5P11021 654 aaKnown RBP7.7□□□□□ -1.18
PMEL-216ENST00000550590 C8orf34Q49A92 452 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 POTEEQ6S8J3 1075 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 Q6ZNB5 142 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 MICALL2Q8IY33 904 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 EXOC6Q8TAG9 804 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 PPP1R9BQ96SB3 815 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 CHMP4BQ9H444 224 aaKnown RBP7.7□□□□□ -1.18
PMEL-216ENST00000550590 ANTXR1Q9H6X2 564 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 BCCIPQ9P287 314 aaKnown RBP eCLIP7.7□□□□□ -1.18
PMEL-216ENST00000550590 RCAN3Q9UKA8 241 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 TIAM1Q13009 1591 aa7.7□□□□□ -1.18
PMEL-216ENST00000550590 ZSCAN20P17040 1043 aaPredicted RBP7.69□□□□□ -1.18
PMEL-216ENST00000550590 CCDC184Q52MB2 194 aa7.69□□□□□ -1.18
PMEL-216ENST00000550590 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
PMEL-216ENST00000550590 MCM4P33991 863 aa7.68□□□□□ -1.18
PMEL-216ENST00000550590 SKOR2Q2VWA4 1001 aaPredicted RBP7.68□□□□□ -1.18
PMEL-216ENST00000550590 IBTKQ9P2D0 1353 aaPredicted RBP7.68□□□□□ -1.18
PMEL-216ENST00000550590 PLEKHH2Q8IVE3 1493 aa7.68□□□□□ -1.18
PMEL-216ENST00000550590 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
PMEL-216ENST00000550590 HIRIP3Q9BW71 556 aaPredicted RBP7.67□□□□□ -1.18
PMEL-216ENST00000550590 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
PMEL-216ENST00000550590 BRD4O60885 1362 aaPredicted RBP7.67□□□□□ -1.18
PMEL-216ENST00000550590 MIA2Q96PC5 1412 aa7.67□□□□□ -1.18
PMEL-216ENST00000550590 VIRMAQ69YN4 1812 aaKnown RBP7.66□□□□□ -1.18
PMEL-216ENST00000550590 A0A0G2JS52 829 aa7.66□□□□□ -1.18
PMEL-216ENST00000550590 MSNP26038 577 aaKnown RBP7.66□□□□□ -1.18
PMEL-216ENST00000550590 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
PMEL-216ENST00000550590 HFM1A2PYH4 1435 aa7.66□□□□□ -1.18
PMEL-216ENST00000550590 LRRC9Q6ZRR7 1453 aa7.66□□□□□ -1.18
PMEL-216ENST00000550590 TRAK2O60296 914 aa7.65□□□□□ -1.18
PMEL-216ENST00000550590 CDK11BP21127 795 aaKnown RBP7.65□□□□□ -1.18
PMEL-216ENST00000550590 SLC4A3P48751 1232 aa7.65□□□□□ -1.18
PMEL-216ENST00000550590 SASS6Q6UVJ0 657 aa7.65□□□□□ -1.18
PMEL-216ENST00000550590 PNISRQ8TF01 805 aaKnown RBP7.65□□□□□ -1.18
PMEL-216ENST00000550590 PANK2Q9BZ23 570 aa7.65□□□□□ -1.18
PMEL-216ENST00000550590 TSPYL1Q9H0U9 437 aa7.65□□□□□ -1.18
PMEL-216ENST00000550590 ZHX1Q9UKY1 873 aaPredicted RBP7.65□□□□□ -1.18
PMEL-216ENST00000550590 EIF3AQ14152 1382 aaKnown RBP7.64□□□□□ -1.19
PMEL-216ENST00000550590 DHX29Q7Z478 1369 aaKnown RBP7.64□□□□□ -1.19
PMEL-216ENST00000550590 NINLQ9Y2I6 1382 aa7.64□□□□□ -1.19
PMEL-216ENST00000550590 TK2O00142 265 aa7.64□□□□□ -1.19
PMEL-216ENST00000550590 ARHGAP33O14559 1287 aa7.64□□□□□ -1.19
PMEL-216ENST00000550590 FAM193AP78312 1265 aa7.64□□□□□ -1.19
PMEL-216ENST00000550590 HOMEZQ8IX15 550 aa7.64□□□□□ -1.19
PMEL-216ENST00000550590 DNAJC2Q99543 621 aaKnown RBP7.64□□□□□ -1.19
PMEL-216ENST00000550590 FAM13BQ9NYF5 915 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms