RNA–Protein interactions for RNA: ENST00000550536.5

RAB3IP-212, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 9,646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-212ENST00000550536 TEFQ10587 303 aa15.31■□□□□ 0.04
RAB3IP-212ENST00000550536 TRIM29Q14134 588 aa15.31■□□□□ 0.04
RAB3IP-212ENST00000550536 CADPSQ9ULU8 1353 aa15.31■□□□□ 0.04
RAB3IP-212ENST00000550536 VPS37DQ86XT2 251 aa15.31■□□□□ 0.04
RAB3IP-212ENST00000550536 KIF21BO75037 1637 aa15.3■□□□□ 0.04
RAB3IP-212ENST00000550536 MIA2Q96PC5 1412 aa15.3■□□□□ 0.04
RAB3IP-212ENST00000550536 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.29■□□□□ 0.04
RAB3IP-212ENST00000550536 ZKSCAN1P17029 563 aaPredicted RBP15.29■□□□□ 0.04
RAB3IP-212ENST00000550536 CPLX2Q6PUV4 134 aaKnown RBP15.29■□□□□ 0.04
RAB3IP-212ENST00000550536 ANKRD20A12PQ8NF67 263 aa15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 RRP1P56182 461 aaKnown RBP15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 DDX49Q9Y6V7 483 aaKnown RBP15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 GPS2Q13227 327 aa15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 DDX19BQ9UMR2 479 aa15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 CCAR2Q8N163 923 aaKnown RBP15.28■□□□□ 0.04
RAB3IP-212ENST00000550536 BCL2L13Q9BXK5 485 aa15.27■□□□□ 0.04
RAB3IP-212ENST00000550536 CTDP1Q9Y5B0 961 aaPredicted RBP15.27■□□□□ 0.03
RAB3IP-212ENST00000550536 GAPVD1Q14C86 1478 aa15.26■□□□□ 0.03
RAB3IP-212ENST00000550536 IPO7O95373 1038 aaKnown RBP15.26■□□□□ 0.03
RAB3IP-212ENST00000550536 APPP05067 770 aa15.26■□□□□ 0.03
RAB3IP-212ENST00000550536 RNF20Q5VTR2 975 aa15.26■□□□□ 0.03
RAB3IP-212ENST00000550536 DDX58O95786 925 aaKnown RBP15.26■□□□□ 0.03
RAB3IP-212ENST00000550536 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 CFAP65Q6ZU64 1925 aaKnown RBP15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 JPH4Q96JJ6 628 aa15.25■□□□□ 0.03
RAB3IP-212ENST00000550536 RAD21O60216 631 aa15.24■□□□□ 0.03
RAB3IP-212ENST00000550536 TRDNQ13061 729 aa15.24■□□□□ 0.03
RAB3IP-212ENST00000550536 CPLX1O14810 134 aa15.24■□□□□ 0.03
RAB3IP-212ENST00000550536 MYOM3Q5VTT5 1437 aa15.24■□□□□ 0.03
RAB3IP-212ENST00000550536 PSME1Q06323 249 aa15.24■□□□□ 0.03
RAB3IP-212ENST00000550536 HECW1Q76N89 1606 aa15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 CCDC47Q96A33 483 aaKnown RBP15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 PCMTD1Q96MG8 357 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 HSP90AA2PQ14568 343 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 MINK1Q8N4C8 1332 aaPredicted RBP15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 RSPH6AQ9H0K4 717 aa15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 TSHZ2Q9NRE2 1034 aa15.23■□□□□ 0.03
RAB3IP-212ENST00000550536 ERICH2A1L162 156 aa15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 PLIN1O60240 522 aa15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 ANO8Q9HCE9 1232 aaPredicted RBP15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 ELL2O00472 640 aaPredicted RBP15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 PTPRGP23470 1445 aa15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 MSH5O43196 834 aa15.22■□□□□ 0.03
RAB3IP-212ENST00000550536 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
RAB3IP-212ENST00000550536 PDE4AP27815 886 aa15.21■□□□□ 0.03
RAB3IP-212ENST00000550536 CRBNQ96SW2 442 aa15.21■□□□□ 0.03
RAB3IP-212ENST00000550536 ATAD2BQ9ULI0 1458 aa15.21■□□□□ 0.03
RAB3IP-212ENST00000550536 MEX3CQ5U5Q3 659 aaKnown RBP15.21■□□□□ 0.02
RAB3IP-212ENST00000550536 FGD5Q6ZNL6 1462 aa15.21■□□□□ 0.02
RAB3IP-212ENST00000550536 SYTL4Q96C24 671 aaPredicted RBP15.21■□□□□ 0.02
RAB3IP-212ENST00000550536 DHX57Q6P158 1386 aaKnown RBP15.21■□□□□ 0.02
RAB3IP-212ENST00000550536 DIAPH1O60610 1272 aaKnown RBP15.2■□□□□ 0.02
RAB3IP-212ENST00000550536 NFXL1Q6ZNB6 911 aa15.2■□□□□ 0.02
RAB3IP-212ENST00000550536 NINLQ9Y2I6 1382 aa15.2■□□□□ 0.02
RAB3IP-212ENST00000550536 G3BP1Q13283 466 aaKnown RBP eCLIP15.2■□□□□ 0.02
RAB3IP-212ENST00000550536 GSE1Q14687 1217 aa15.19■□□□□ 0.02
RAB3IP-212ENST00000550536 CCDC43Q96MW1 224 aaKnown RBP15.19■□□□□ 0.02
RAB3IP-212ENST00000550536 RIPK4P57078 832 aa15.19■□□□□ 0.02
RAB3IP-212ENST00000550536 FYCO1Q9BQS8 1478 aa15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 ERC2O15083 957 aa15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 DZIP1LQ8IYY4 767 aaKnown RBP15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 DHX16O60231 1041 aaKnown RBP15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 INTS3Q68E01 1043 aaKnown RBP15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 COG6Q9Y2V7 657 aa15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 ZNF592Q92610 1267 aa15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 PRKRIP1Q9H875 184 aaPredicted RBP15.18■□□□□ 0.02
RAB3IP-212ENST00000550536 NECTIN2Q92692 538 aa15.17■□□□□ 0.02
RAB3IP-212ENST00000550536 BICD2Q8TD16 824 aa15.17■□□□□ 0.02
RAB3IP-212ENST00000550536 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
RAB3IP-212ENST00000550536 API5Q9BZZ5 524 aaKnown RBP15.17■□□□□ 0.02
RAB3IP-212ENST00000550536 FKBP5Q13451 457 aaPredicted RBP15.17■□□□□ 0.02
RAB3IP-212ENST00000550536 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
RAB3IP-212ENST00000550536 TEX35Q5T0J7 233 aa15.16■□□□□ 0.02
RAB3IP-212ENST00000550536 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB3IP-212ENST00000550536 SAFBQ15424 915 aaKnown RBP eCLIP15.16■□□□□ 0.02
RAB3IP-212ENST00000550536 HOMER1Q86YM7 354 aa15.15■□□□□ 0.02
RAB3IP-212ENST00000550536 HSP90AB4PQ58FF6 505 aa15.15■□□□□ 0.02
RAB3IP-212ENST00000550536 FGD6Q6ZV73 1430 aa15.15■□□□□ 0.02
RAB3IP-212ENST00000550536 NAT10Q9H0A0 1025 aaKnown RBP15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 BRMS1Q9HCU9 246 aa15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 SMG6Q86US8 1419 aaKnown RBP15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 SASS6Q6UVJ0 657 aa15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 EPS15P42566 896 aa15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 EXOC6Q8TAG9 804 aa15.14■□□□□ 0.01
RAB3IP-212ENST00000550536 AAMPQ13685 434 aa15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 CNKSR2Q8WXI2 1034 aa15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 RBM33Q96EV2 1170 aaKnown RBP15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 ERICH3Q5RHP9 1530 aa15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 APAF1O14727 1248 aa15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
RAB3IP-212ENST00000550536 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
RAB3IP-212ENST00000550536 RALYLQ86SE5 291 aaKnown RBP15.12■□□□□ 0.01
RAB3IP-212ENST00000550536 WWC1Q8IX03 1113 aa15.12■□□□□ 0.01
RAB3IP-212ENST00000550536 GNAI1P63096 354 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms