RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, humanhuman

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-223ENST00000550442 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
LETMD1-223ENST00000550442 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
LETMD1-223ENST00000550442 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
LETMD1-223ENST00000550442 KIF15Q9NS87 1388 aa16.47■□□□□ 0.23
LETMD1-223ENST00000550442 RTEL1-TNFRSF6BF6WH68 1400 aa16.46■□□□□ 0.23
LETMD1-223ENST00000550442 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
LETMD1-223ENST00000550442 STAC3Q96MF2 364 aa16.45■□□□□ 0.22
LETMD1-223ENST00000550442 SCAF11Q99590 1463 aaKnown RBP16.44■□□□□ 0.22
LETMD1-223ENST00000550442 NUP155O75694 1391 aa16.44■□□□□ 0.22
LETMD1-223ENST00000550442 JCADQ9P266 1359 aa16.42■□□□□ 0.22
LETMD1-223ENST00000550442 ZNF772Q68DY9 489 aaPredicted RBP16.42■□□□□ 0.22
LETMD1-223ENST00000550442 ERBINQ96RT1 1412 aa16.41■□□□□ 0.22
LETMD1-223ENST00000550442 PHLPP1O60346 1717 aa16.41■□□□□ 0.22
LETMD1-223ENST00000550442 DUOX2Q9NRD8 1548 aa16.4■□□□□ 0.22
LETMD1-223ENST00000550442 MEX3CQ5U5Q3 659 aaKnown RBP16.4■□□□□ 0.22
LETMD1-223ENST00000550442 YTHDC1Q96MU7 727 aaKnown RBP16.4■□□□□ 0.22
LETMD1-223ENST00000550442 UBR1Q8IWV7 1749 aa16.39■□□□□ 0.21
LETMD1-223ENST00000550442 TMEM94Q12767 1356 aa16.38■□□□□ 0.21
LETMD1-223ENST00000550442 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
LETMD1-223ENST00000550442 HSPA5P11021 654 aaKnown RBP16.38■□□□□ 0.21
LETMD1-223ENST00000550442 TXNDC2Q86VQ3 553 aa16.38■□□□□ 0.21
LETMD1-223ENST00000550442 EID1Q9Y6B2 187 aa16.37■□□□□ 0.21
LETMD1-223ENST00000550442 UNC13BO14795 1591 aa16.37■□□□□ 0.21
LETMD1-223ENST00000550442 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
LETMD1-223ENST00000550442 CFAP65Q6ZU64 1925 aaKnown RBP16.36■□□□□ 0.21
LETMD1-223ENST00000550442 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
LETMD1-223ENST00000550442 RXRBP28702 533 aa16.35■□□□□ 0.21
LETMD1-223ENST00000550442 LTKP29376 864 aa16.35■□□□□ 0.21
LETMD1-223ENST00000550442 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
LETMD1-223ENST00000550442 ARHGAP23Q9P227 1491 aa16.34■□□□□ 0.21
LETMD1-223ENST00000550442 SLIT1O75093 1534 aa16.34■□□□□ 0.21
LETMD1-223ENST00000550442 SPATA31A6Q5VVP1 1343 aa16.33■□□□□ 0.2
LETMD1-223ENST00000550442 ABCC3O15438 1527 aa16.32■□□□□ 0.2
LETMD1-223ENST00000550442 SRCAPQ6ZRS2 3230 aa16.32■□□□□ 0.2
LETMD1-223ENST00000550442 CCDC7Q96M83 1385 aa16.32■□□□□ 0.2
LETMD1-223ENST00000550442 RALGAPBQ86X10 1494 aa16.31■□□□□ 0.2
LETMD1-223ENST00000550442 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
LETMD1-223ENST00000550442 MSH6P52701 1360 aa16.31■□□□□ 0.2
LETMD1-223ENST00000550442 KCNA6P17658 529 aa16.31■□□□□ 0.2
LETMD1-223ENST00000550442 LRP6O75581 1613 aa16.3■□□□□ 0.2
LETMD1-223ENST00000550442 IQGAP3Q86VI3 1631 aa16.3■□□□□ 0.2
LETMD1-223ENST00000550442 WASHC2AQ641Q2 1341 aa16.3■□□□□ 0.2
LETMD1-223ENST00000550442 SLAIN2Q9P270 581 aa16.3■□□□□ 0.2
LETMD1-223ENST00000550442 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
LETMD1-223ENST00000550442 COL16A1Q07092 1604 aaPredicted RBP16.29■□□□□ 0.2
LETMD1-223ENST00000550442 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
LETMD1-223ENST00000550442 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
LETMD1-223ENST00000550442 FOXD1Q16676 465 aa16.28■□□□□ 0.2
LETMD1-223ENST00000550442 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
LETMD1-223ENST00000550442 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
LETMD1-223ENST00000550442 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.2
LETMD1-223ENST00000550442 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.19
LETMD1-223ENST00000550442 CEP152O94986 1710 aa16.25■□□□□ 0.19
LETMD1-223ENST00000550442 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
LETMD1-223ENST00000550442 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
LETMD1-223ENST00000550442 USP47Q96K76 1375 aa16.24■□□□□ 0.19
LETMD1-223ENST00000550442 TMEM2Q9UHN6 1383 aa16.24■□□□□ 0.19
LETMD1-223ENST00000550442 SLC26A8Q96RN1 970 aa16.22■□□□□ 0.19
LETMD1-223ENST00000550442 LAMC1P11047 1609 aa16.22■□□□□ 0.19
LETMD1-223ENST00000550442 KANK1Q14678 1352 aa16.22■□□□□ 0.19
LETMD1-223ENST00000550442 EIF2AK4Q9P2K8 1649 aaKnown RBP16.22■□□□□ 0.19
LETMD1-223ENST00000550442 NWD1Q149M9 1564 aa16.21■□□□□ 0.19
LETMD1-223ENST00000550442 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
LETMD1-223ENST00000550442 ZRANB1Q9UGI0 708 aa16.21■□□□□ 0.19
LETMD1-223ENST00000550442 GPRASP1Q5JY77 1395 aa16.21■□□□□ 0.19
LETMD1-223ENST00000550442 HIRIP3Q9BW71 556 aaPredicted RBP16.2■□□□□ 0.18
LETMD1-223ENST00000550442 KDM5AP29375 1690 aaKnown RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 NUTM2DQ5VT03 806 aaPredicted RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 PRKRIP1Q9H875 184 aaPredicted RBP16.19■□□□□ 0.18
LETMD1-223ENST00000550442 KIF7Q2M1P5 1343 aa16.19■□□□□ 0.18
LETMD1-223ENST00000550442 BCANQ96GW7 911 aa16.18■□□□□ 0.18
LETMD1-223ENST00000550442 CARD11Q9BXL7 1154 aa16.18■□□□□ 0.18
LETMD1-223ENST00000550442 EFCAB6Q5THR3 1501 aa16.18■□□□□ 0.18
LETMD1-223ENST00000550442 AFF2P51816 1311 aa16.18■□□□□ 0.18
LETMD1-223ENST00000550442 TET3O43151 1660 aa16.18■□□□□ 0.18
LETMD1-223ENST00000550442 AHDC1Q5TGY3 1603 aaPredicted RBP16.17■□□□□ 0.18
LETMD1-223ENST00000550442 MROH1Q8NDA8 1641 aa16.17■□□□□ 0.18
LETMD1-223ENST00000550442 ERICH6BQ5W0A0 696 aa16.17■□□□□ 0.18
LETMD1-223ENST00000550442 RGS12O14924 1447 aa16.17■□□□□ 0.18
LETMD1-223ENST00000550442 ARHGAP31Q2M1Z3 1444 aa16.16■□□□□ 0.18
LETMD1-223ENST00000550442 PRAG1Q86YV5 1406 aa16.16■□□□□ 0.18
LETMD1-223ENST00000550442 RBM6P78332 1123 aaKnown RBP16.15■□□□□ 0.18
LETMD1-223ENST00000550442 C14orf37Q86TY3 774 aa16.15■□□□□ 0.18
LETMD1-223ENST00000550442 DCAF11Q8TEB1 546 aa16.15■□□□□ 0.18
LETMD1-223ENST00000550442 ATAD2Q6PL18 1390 aa16.14■□□□□ 0.17
LETMD1-223ENST00000550442 NEFLP07196 543 aa16.13■□□□□ 0.17
LETMD1-223ENST00000550442 QTRT2Q9H974 415 aaKnown RBP16.13■□□□□ 0.17
LETMD1-223ENST00000550442 CHD2O14647 1828 aaKnown RBP16.12■□□□□ 0.17
LETMD1-223ENST00000550442 CADPS2Q86UW7 1296 aa16.12■□□□□ 0.17
LETMD1-223ENST00000550442 TRPM2O94759 1503 aa16.11■□□□□ 0.17
LETMD1-223ENST00000550442 RALBP1Q15311 655 aa16.11■□□□□ 0.17
LETMD1-223ENST00000550442 SETBP1Q9Y6X0 1596 aa16.11■□□□□ 0.17
LETMD1-223ENST00000550442 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
LETMD1-223ENST00000550442 ATF3P18847 181 aa16.1■□□□□ 0.17
LETMD1-223ENST00000550442 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
LETMD1-223ENST00000550442 NGLY1Q96IV0 654 aa16.1■□□□□ 0.17
LETMD1-223ENST00000550442 DIP2AQ14689 1571 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms