RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 PIK3C2BO00750 1634 aa15.16■□□□□ 0.02
CHPT1-206ENST00000550385 C3P01024 1663 aa15.16■□□□□ 0.02
CHPT1-206ENST00000550385 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
CHPT1-206ENST00000550385 RIMS1Q86UR5 1692 aaKnown RBP15.15■□□□□ 0.02
CHPT1-206ENST00000550385 UGGT1Q9NYU2 1555 aa15.15■□□□□ 0.02
CHPT1-206ENST00000550385 NLRP1Q9C000 1473 aa15.14■□□□□ 0.01
CHPT1-206ENST00000550385 VGFO15240 615 aaPredicted RBP15.13■□□□□ 0.01
CHPT1-206ENST00000550385 C1QBPQ07021 282 aaKnown RBP15.12■□□□□ 0.01
CHPT1-206ENST00000550385 ADGRB3O60242 1522 aa15.12■□□□□ 0.01
CHPT1-206ENST00000550385 SLC4A2P04920 1241 aa15.11■□□□□ 0.01
CHPT1-206ENST00000550385 THEMISQ8N1K5 641 aaPredicted RBP15.11■□□□□ 0.01
CHPT1-206ENST00000550385 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.11■□□□□ 0.01
CHPT1-206ENST00000550385 PTPRMP28827 1452 aa15.11■□□□□ 0.01
CHPT1-206ENST00000550385 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
CHPT1-206ENST00000550385 UHRF1BP1Q6BDS2 1440 aa15.1■□□□□ 0.01
CHPT1-206ENST00000550385 TMEM131LA2VDJ0 1609 aa15.08■□□□□ 0
CHPT1-206ENST00000550385 KDM4FA0A1W2PPD8 638 aa15.08■□□□□ 0
CHPT1-206ENST00000550385 NBPF8Q3BBV2 869 aa15.08■□□□□ 0
CHPT1-206ENST00000550385 A2ML1A8K2U0 1454 aa15.08■□□□□ 0
CHPT1-206ENST00000550385 KDM5AP29375 1690 aaKnown RBP15.07■□□□□ 0
CHPT1-206ENST00000550385 ZFYVE9O95405 1425 aa15.06■□□□□ 0
CHPT1-206ENST00000550385 MYOM2P54296 1465 aa15.06■□□□□ 0
CHPT1-206ENST00000550385 EID1Q9Y6B2 187 aa15.05■□□□□ -0
CHPT1-206ENST00000550385 PRAG1Q86YV5 1406 aa15.05■□□□□ -0
CHPT1-206ENST00000550385 CACNB1Q02641 598 aaPredicted RBP15.04■□□□□ -0
CHPT1-206ENST00000550385 RIMS2Q9UQ26 1411 aa15.03■□□□□ -0
CHPT1-206ENST00000550385 TMEM2Q9UHN6 1383 aa15.03■□□□□ -0
CHPT1-206ENST00000550385 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
CHPT1-206ENST00000550385 NEXMIFQ5QGS0 1516 aa15.02□□□□□ -0.01
CHPT1-206ENST00000550385 PPLO60437 1756 aa15.01□□□□□ -0.01
CHPT1-206ENST00000550385 TXNDC2Q86VQ3 553 aa15.01□□□□□ -0.01
CHPT1-206ENST00000550385 NRXN1Q9ULB1 1477 aa15.01□□□□□ -0.01
CHPT1-206ENST00000550385 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
CHPT1-206ENST00000550385 IFT172Q9UG01 1749 aa15□□□□□ -0.01
CHPT1-206ENST00000550385 MYO3AQ8NEV4 1616 aa15□□□□□ -0.01
CHPT1-206ENST00000550385 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
CHPT1-206ENST00000550385 CARD11Q9BXL7 1154 aa15□□□□□ -0.01
CHPT1-206ENST00000550385 C14orf93Q9H972 538 aaKnown RBP15□□□□□ -0.01
CHPT1-206ENST00000550385 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
CHPT1-206ENST00000550385 RALGAPBQ86X10 1494 aa15□□□□□ -0.01
CHPT1-206ENST00000550385 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
CHPT1-206ENST00000550385 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
CHPT1-206ENST00000550385 CEP170BQ9Y4F5 1589 aaPredicted RBP14.99□□□□□ -0.01
CHPT1-206ENST00000550385 EIF4G2P78344 907 aaKnown RBP eCLIP14.99□□□□□ -0.01
CHPT1-206ENST00000550385 ANKLE2Q86XL3 938 aa14.99□□□□□ -0.01
CHPT1-206ENST00000550385 CFAP70Q5T0N1 1121 aa14.98□□□□□ -0.01
CHPT1-206ENST00000550385 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
CHPT1-206ENST00000550385 SLIT1O75093 1534 aa14.97□□□□□ -0.01
CHPT1-206ENST00000550385 ARHGAP23Q9P227 1491 aa14.97□□□□□ -0.01
CHPT1-206ENST00000550385 BCANQ96GW7 911 aa14.97□□□□□ -0.01
CHPT1-206ENST00000550385 LTKP29376 864 aa14.96□□□□□ -0.01
CHPT1-206ENST00000550385 NBPF1Q3BBV0 1214 aa14.96□□□□□ -0.01
CHPT1-206ENST00000550385 ZNF142P52746 1687 aaPredicted RBP14.96□□□□□ -0.01
CHPT1-206ENST00000550385 GPRASP1Q5JY77 1395 aa14.96□□□□□ -0.02
CHPT1-206ENST00000550385 KIAA1210Q9ULL0 1709 aa14.95□□□□□ -0.02
CHPT1-206ENST00000550385 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
CHPT1-206ENST00000550385 TRPM1Q7Z4N2 1603 aa14.95□□□□□ -0.02
CHPT1-206ENST00000550385 PLEKHG1Q9ULL1 1385 aa14.94□□□□□ -0.02
CHPT1-206ENST00000550385 SLC24A1O60721 1099 aa14.93□□□□□ -0.02
CHPT1-206ENST00000550385 HSPA5P11021 654 aaKnown RBP14.92□□□□□ -0.02
CHPT1-206ENST00000550385 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
CHPT1-206ENST00000550385 LAMC1P11047 1609 aa14.91□□□□□ -0.02
CHPT1-206ENST00000550385 SETBP1Q9Y6X0 1596 aa14.9□□□□□ -0.02
CHPT1-206ENST00000550385 USP47Q96K76 1375 aa14.9□□□□□ -0.02
CHPT1-206ENST00000550385 TBX22Q9Y458 520 aa14.9□□□□□ -0.02
CHPT1-206ENST00000550385 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
CHPT1-206ENST00000550385 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
CHPT1-206ENST00000550385 TMEM132EQ6IEE7 984 aa14.88□□□□□ -0.03
CHPT1-206ENST00000550385 FOXD4L1Q9NU39 408 aa14.88□□□□□ -0.03
CHPT1-206ENST00000550385 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
CHPT1-206ENST00000550385 SIRT1Q96EB6 747 aa14.85□□□□□ -0.03
CHPT1-206ENST00000550385 TRAK1Q9UPV9 953 aa14.85□□□□□ -0.03
CHPT1-206ENST00000550385 ADGRB1O14514 1584 aa14.85□□□□□ -0.03
CHPT1-206ENST00000550385 ADAMTS13Q76LX8 1427 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 MED14O60244 1454 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 SLC26A8Q96RN1 970 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 HIRIP3Q9BW71 556 aaPredicted RBP14.84□□□□□ -0.03
CHPT1-206ENST00000550385 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
CHPT1-206ENST00000550385 ABCC11Q96J66 1382 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 PIK3R4Q99570 1358 aa14.84□□□□□ -0.03
CHPT1-206ENST00000550385 YTHDC2Q9H6S0 1430 aaKnown RBP14.83□□□□□ -0.03
CHPT1-206ENST00000550385 DIP2AQ14689 1571 aa14.83□□□□□ -0.04
CHPT1-206ENST00000550385 STK26Q9P289 416 aa14.83□□□□□ -0.04
CHPT1-206ENST00000550385 NPHP4O75161 1426 aaPredicted RBP14.83□□□□□ -0.04
CHPT1-206ENST00000550385 LMTK3Q96Q04 1460 aa14.82□□□□□ -0.04
CHPT1-206ENST00000550385 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
CHPT1-206ENST00000550385 HSPA2P54652 639 aa14.81□□□□□ -0.04
CHPT1-206ENST00000550385 CDCA8Q53HL2 280 aa14.81□□□□□ -0.04
CHPT1-206ENST00000550385 POGKQ9P215 609 aa14.81□□□□□ -0.04
CHPT1-206ENST00000550385 CENPJQ9HC77 1338 aaPredicted RBP14.81□□□□□ -0.04
CHPT1-206ENST00000550385 METP08581 1390 aa14.81□□□□□ -0.04
CHPT1-206ENST00000550385 MYCNP04198 464 aaPredicted RBP14.8□□□□□ -0.04
CHPT1-206ENST00000550385 TMF1P82094 1093 aa14.8□□□□□ -0.04
CHPT1-206ENST00000550385 IQGAP1P46940 1657 aa14.8□□□□□ -0.04
CHPT1-206ENST00000550385 TESK2Q96S53 571 aa14.79□□□□□ -0.04
CHPT1-206ENST00000550385 AMOTL2Q9Y2J4 779 aa14.79□□□□□ -0.04
CHPT1-206ENST00000550385 POLR1AO95602 1720 aaPredicted RBP14.78□□□□□ -0.04
CHPT1-206ENST00000550385 ASXL1Q8IXJ9 1541 aa14.77□□□□□ -0.04
CHPT1-206ENST00000550385 DLC1Q96QB1 1528 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms