RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 MYOM2P54296 1465 aa17.7■□□□□ 0.42
CACNB3-214ENST00000550168 LAMC1P11047 1609 aa17.7■□□□□ 0.42
CACNB3-214ENST00000550168 KIF1BO60333 1816 aa17.7■□□□□ 0.42
CACNB3-214ENST00000550168 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
CACNB3-214ENST00000550168 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
CACNB3-214ENST00000550168 GPRASP1Q5JY77 1395 aa17.68■□□□□ 0.42
CACNB3-214ENST00000550168 PIK3C2BO00750 1634 aa17.68■□□□□ 0.42
CACNB3-214ENST00000550168 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CACNB3-214ENST00000550168 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
CACNB3-214ENST00000550168 TRPM1Q7Z4N2 1603 aa17.66■□□□□ 0.42
CACNB3-214ENST00000550168 HSPA5P11021 654 aaKnown RBP17.65■□□□□ 0.42
CACNB3-214ENST00000550168 ZNF326Q5BKZ1 582 aaKnown RBP17.65■□□□□ 0.42
CACNB3-214ENST00000550168 ESF1Q9H501 851 aaKnown RBP17.65■□□□□ 0.42
CACNB3-214ENST00000550168 KDM2AQ9Y2K7 1162 aa17.65■□□□□ 0.42
CACNB3-214ENST00000550168 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
CACNB3-214ENST00000550168 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
CACNB3-214ENST00000550168 USP47Q96K76 1375 aa17.64■□□□□ 0.41
CACNB3-214ENST00000550168 ERVK-7P63135 1459 aa17.63■□□□□ 0.41
CACNB3-214ENST00000550168 SYNMO15061 1565 aa17.63■□□□□ 0.41
CACNB3-214ENST00000550168 CARD11Q9BXL7 1154 aa17.63■□□□□ 0.41
CACNB3-214ENST00000550168 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
CACNB3-214ENST00000550168 UGGT1Q9NYU2 1555 aa17.61■□□□□ 0.41
CACNB3-214ENST00000550168 CLTCQ00610 1675 aaKnown RBP17.61■□□□□ 0.41
CACNB3-214ENST00000550168 NRXN1Q9ULB1 1477 aa17.6■□□□□ 0.41
CACNB3-214ENST00000550168 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
CACNB3-214ENST00000550168 IFT172Q9UG01 1749 aa17.59■□□□□ 0.41
CACNB3-214ENST00000550168 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
CACNB3-214ENST00000550168 SLC24A1O60721 1099 aa17.56■□□□□ 0.4
CACNB3-214ENST00000550168 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
CACNB3-214ENST00000550168 POLR1AO95602 1720 aaPredicted RBP17.55■□□□□ 0.4
CACNB3-214ENST00000550168 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
CACNB3-214ENST00000550168 ZMYM3Q14202 1370 aa17.54■□□□□ 0.4
CACNB3-214ENST00000550168 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
CACNB3-214ENST00000550168 PPLO60437 1756 aa17.53■□□□□ 0.4
CACNB3-214ENST00000550168 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
CACNB3-214ENST00000550168 SETBP1Q9Y6X0 1596 aa17.53■□□□□ 0.4
CACNB3-214ENST00000550168 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
CACNB3-214ENST00000550168 NCKAP5LQ9HCH0 1330 aa17.52■□□□□ 0.4
CACNB3-214ENST00000550168 TMEM131LA2VDJ0 1609 aa17.52■□□□□ 0.4
CACNB3-214ENST00000550168 IDI1Q13907 227 aa17.52■□□□□ 0.4
CACNB3-214ENST00000550168 SCAF11Q99590 1463 aaKnown RBP17.51■□□□□ 0.39
CACNB3-214ENST00000550168 PIK3C2GO75747 1445 aa17.51■□□□□ 0.39
CACNB3-214ENST00000550168 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
CACNB3-214ENST00000550168 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
CACNB3-214ENST00000550168 WASHC2AQ641Q2 1341 aa17.5■□□□□ 0.39
CACNB3-214ENST00000550168 HIRIP3Q9BW71 556 aaPredicted RBP17.5■□□□□ 0.39
CACNB3-214ENST00000550168 DDX10Q13206 875 aaKnown RBP17.49■□□□□ 0.39
CACNB3-214ENST00000550168 IQGAP1P46940 1657 aa17.48■□□□□ 0.39
CACNB3-214ENST00000550168 NBPF1Q3BBV0 1214 aa17.47■□□□□ 0.39
CACNB3-214ENST00000550168 TNRQ92752 1358 aa17.47■□□□□ 0.39
CACNB3-214ENST00000550168 NLRP1Q9C000 1473 aa17.47■□□□□ 0.39
CACNB3-214ENST00000550168 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.39
CACNB3-214ENST00000550168 STAG3Q9UJ98 1225 aa17.46■□□□□ 0.39
CACNB3-214ENST00000550168 ALKQ9UM73 1620 aa17.46■□□□□ 0.39
CACNB3-214ENST00000550168 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.38
CACNB3-214ENST00000550168 ADGRF5Q8IZF2 1346 aa17.46■□□□□ 0.38
CACNB3-214ENST00000550168 CFAP65Q6ZU64 1925 aaKnown RBP17.45■□□□□ 0.38
CACNB3-214ENST00000550168 ST20-MTHFSA0A0A6YYL1 179 aa17.45■□□□□ 0.38
CACNB3-214ENST00000550168 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
CACNB3-214ENST00000550168 C14orf93Q9H972 538 aaKnown RBP17.45■□□□□ 0.38
CACNB3-214ENST00000550168 CPS1P31327 1500 aa17.45■□□□□ 0.38
CACNB3-214ENST00000550168 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
CACNB3-214ENST00000550168 MIER1Q8N108 512 aa17.44■□□□□ 0.38
CACNB3-214ENST00000550168 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
CACNB3-214ENST00000550168 ANP32CO43423 234 aa17.43■□□□□ 0.38
CACNB3-214ENST00000550168 CDCA8Q53HL2 280 aa17.43■□□□□ 0.38
CACNB3-214ENST00000550168 SBNO2Q9Y2G9 1366 aa17.41■□□□□ 0.38
CACNB3-214ENST00000550168 TMF1P82094 1093 aa17.41■□□□□ 0.38
CACNB3-214ENST00000550168 C3P01024 1663 aa17.4■□□□□ 0.38
CACNB3-214ENST00000550168 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
CACNB3-214ENST00000550168 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.38
CACNB3-214ENST00000550168 ADGRB1O14514 1584 aa17.39■□□□□ 0.37
CACNB3-214ENST00000550168 C11orf95C9JLR9 678 aaPredicted RBP17.38■□□□□ 0.37
CACNB3-214ENST00000550168 TESK2Q96S53 571 aa17.38■□□□□ 0.37
CACNB3-214ENST00000550168 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
CACNB3-214ENST00000550168 CCER2I3L3R5 266 aa17.37■□□□□ 0.37
CACNB3-214ENST00000550168 RBM33Q96EV2 1170 aaKnown RBP17.37■□□□□ 0.37
CACNB3-214ENST00000550168 MYO5BQ9ULV0 1848 aa17.35■□□□□ 0.37
CACNB3-214ENST00000550168 UBR1Q8IWV7 1749 aa17.33■□□□□ 0.36
CACNB3-214ENST00000550168 KTN1Q86UP2 1357 aaKnown RBP17.32■□□□□ 0.36
CACNB3-214ENST00000550168 TMEM2Q9UHN6 1383 aa17.32■□□□□ 0.36
CACNB3-214ENST00000550168 CENPJQ9HC77 1338 aaPredicted RBP17.31■□□□□ 0.36
CACNB3-214ENST00000550168 ZRANB1Q9UGI0 708 aa17.31■□□□□ 0.36
CACNB3-214ENST00000550168 PUS7Q96PZ0 661 aaKnown RBP17.3■□□□□ 0.36
CACNB3-214ENST00000550168 SLIT1O75093 1534 aa17.29■□□□□ 0.36
CACNB3-214ENST00000550168 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
CACNB3-214ENST00000550168 ARHGAP23Q9P227 1491 aa17.27■□□□□ 0.36
CACNB3-214ENST00000550168 THEMISQ8N1K5 641 aaPredicted RBP17.27■□□□□ 0.36
CACNB3-214ENST00000550168 POLR3GLQ9BT43 218 aa17.26■□□□□ 0.35
CACNB3-214ENST00000550168 EID1Q9Y6B2 187 aa17.26■□□□□ 0.35
CACNB3-214ENST00000550168 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
CACNB3-214ENST00000550168 PLEKHG1Q9ULL1 1385 aa17.26■□□□□ 0.35
CACNB3-214ENST00000550168 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
CACNB3-214ENST00000550168 ARHGEF28Q8N1W1 1705 aaKnown RBP17.24■□□□□ 0.35
CACNB3-214ENST00000550168 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
CACNB3-214ENST00000550168 QRICH2Q9H0J4 1663 aa17.23■□□□□ 0.35
CACNB3-214ENST00000550168 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-214ENST00000550168 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
CACNB3-214ENST00000550168 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
CACNB3-214ENST00000550168 PRKRIP1Q9H875 184 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms