RNA–Protein interactions for RNA: ENST00000550160.5

CNOT2-223, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-223ENST00000550160 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
CNOT2-223ENST00000550160 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
CNOT2-223ENST00000550160 TMEM131LA2VDJ0 1609 aa16.58■□□□□ 0.24
CNOT2-223ENST00000550160 KDM5AP29375 1690 aaKnown RBP16.56■□□□□ 0.24
CNOT2-223ENST00000550160 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
CNOT2-223ENST00000550160 HDGFP51858 240 aaKnown RBP16.56■□□□□ 0.24
CNOT2-223ENST00000550160 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
CNOT2-223ENST00000550160 MYOM2P54296 1465 aa16.55■□□□□ 0.24
CNOT2-223ENST00000550160 UHRF1BP1Q6BDS2 1440 aa16.55■□□□□ 0.24
CNOT2-223ENST00000550160 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
CNOT2-223ENST00000550160 SETD1BQ9UPS6 1966 aaKnown RBP16.53■□□□□ 0.24
CNOT2-223ENST00000550160 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
CNOT2-223ENST00000550160 THEMISQ8N1K5 641 aaPredicted RBP16.53■□□□□ 0.24
CNOT2-223ENST00000550160 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
CNOT2-223ENST00000550160 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
CNOT2-223ENST00000550160 CEP170BQ9Y4F5 1589 aaPredicted RBP16.51■□□□□ 0.23
CNOT2-223ENST00000550160 NEXMIFQ5QGS0 1516 aa16.51■□□□□ 0.23
CNOT2-223ENST00000550160 ZFYVE9O95405 1425 aa16.51■□□□□ 0.23
CNOT2-223ENST00000550160 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
CNOT2-223ENST00000550160 UBR1Q8IWV7 1749 aa16.5■□□□□ 0.23
CNOT2-223ENST00000550160 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
CNOT2-223ENST00000550160 NBPF8Q3BBV2 869 aa16.5■□□□□ 0.23
CNOT2-223ENST00000550160 PPLO60437 1756 aa16.5■□□□□ 0.23
CNOT2-223ENST00000550160 TMEM2Q9UHN6 1383 aa16.5■□□□□ 0.23
CNOT2-223ENST00000550160 ZNF142P52746 1687 aaPredicted RBP16.5■□□□□ 0.23
CNOT2-223ENST00000550160 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
CNOT2-223ENST00000550160 RALGAPBQ86X10 1494 aa16.48■□□□□ 0.23
CNOT2-223ENST00000550160 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
CNOT2-223ENST00000550160 NRXN1Q9ULB1 1477 aa16.48■□□□□ 0.23
CNOT2-223ENST00000550160 ADGRF5Q8IZF2 1346 aa16.47■□□□□ 0.23
CNOT2-223ENST00000550160 DMRT2Q9Y5R5 561 aa16.46■□□□□ 0.23
CNOT2-223ENST00000550160 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
CNOT2-223ENST00000550160 PIK3C2GO75747 1445 aa16.45■□□□□ 0.22
CNOT2-223ENST00000550160 SLIT1O75093 1534 aa16.45■□□□□ 0.22
CNOT2-223ENST00000550160 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
CNOT2-223ENST00000550160 ARHGAP23Q9P227 1491 aa16.44■□□□□ 0.22
CNOT2-223ENST00000550160 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
CNOT2-223ENST00000550160 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
CNOT2-223ENST00000550160 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
CNOT2-223ENST00000550160 KIAA1210Q9ULL0 1709 aa16.42■□□□□ 0.22
CNOT2-223ENST00000550160 LAMC1P11047 1609 aa16.42■□□□□ 0.22
CNOT2-223ENST00000550160 GPRASP1Q5JY77 1395 aa16.41■□□□□ 0.22
CNOT2-223ENST00000550160 BCANQ96GW7 911 aa16.41■□□□□ 0.22
CNOT2-223ENST00000550160 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
CNOT2-223ENST00000550160 SCAF11Q99590 1463 aaKnown RBP16.41■□□□□ 0.22
CNOT2-223ENST00000550160 PLEKHG1Q9ULL1 1385 aa16.4■□□□□ 0.22
CNOT2-223ENST00000550160 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNOT2-223ENST00000550160 ANKLE2Q86XL3 938 aa16.4■□□□□ 0.22
CNOT2-223ENST00000550160 CFAP70Q5T0N1 1121 aa16.39■□□□□ 0.21
CNOT2-223ENST00000550160 RNF216Q9NWF9 866 aaPredicted RBP16.39■□□□□ 0.21
CNOT2-223ENST00000550160 SETBP1Q9Y6X0 1596 aa16.38■□□□□ 0.21
CNOT2-223ENST00000550160 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
CNOT2-223ENST00000550160 LTKP29376 864 aa16.36■□□□□ 0.21
CNOT2-223ENST00000550160 EIF3AQ14152 1382 aaKnown RBP16.36■□□□□ 0.21
CNOT2-223ENST00000550160 USP47Q96K76 1375 aa16.36■□□□□ 0.21
CNOT2-223ENST00000550160 ALKQ9UM73 1620 aa16.35■□□□□ 0.21
CNOT2-223ENST00000550160 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
CNOT2-223ENST00000550160 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
CNOT2-223ENST00000550160 DIP2AQ14689 1571 aa16.32■□□□□ 0.2
CNOT2-223ENST00000550160 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
CNOT2-223ENST00000550160 ADGRB1O14514 1584 aa16.31■□□□□ 0.2
CNOT2-223ENST00000550160 IQGAP1P46940 1657 aa16.3■□□□□ 0.2
CNOT2-223ENST00000550160 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
CNOT2-223ENST00000550160 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
CNOT2-223ENST00000550160 TMEM132EQ6IEE7 984 aa16.3■□□□□ 0.2
CNOT2-223ENST00000550160 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
CNOT2-223ENST00000550160 POLR1AO95602 1720 aaPredicted RBP16.3■□□□□ 0.2
CNOT2-223ENST00000550160 ADAMTS13Q76LX8 1427 aa16.29■□□□□ 0.2
CNOT2-223ENST00000550160 MED14O60244 1454 aa16.29■□□□□ 0.2
CNOT2-223ENST00000550160 SLC24A1O60721 1099 aa16.28■□□□□ 0.2
CNOT2-223ENST00000550160 HSPA2P54652 639 aa16.28■□□□□ 0.2
CNOT2-223ENST00000550160 SLC26A8Q96RN1 970 aa16.28■□□□□ 0.2
CNOT2-223ENST00000550160 YTHDC2Q9H6S0 1430 aaKnown RBP16.28■□□□□ 0.2
CNOT2-223ENST00000550160 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
CNOT2-223ENST00000550160 NCKAP5LQ9HCH0 1330 aa16.27■□□□□ 0.2
CNOT2-223ENST00000550160 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.2
CNOT2-223ENST00000550160 ASXL1Q8IXJ9 1541 aa16.27■□□□□ 0.2
CNOT2-223ENST00000550160 PIK3R4Q99570 1358 aa16.26■□□□□ 0.19
CNOT2-223ENST00000550160 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
CNOT2-223ENST00000550160 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
CNOT2-223ENST00000550160 METP08581 1390 aa16.26■□□□□ 0.19
CNOT2-223ENST00000550160 HOXD11P31277 338 aaPredicted RBP16.25■□□□□ 0.19
CNOT2-223ENST00000550160 STK26Q9P289 416 aa16.25■□□□□ 0.19
CNOT2-223ENST00000550160 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
CNOT2-223ENST00000550160 CENPJQ9HC77 1338 aaPredicted RBP16.24■□□□□ 0.19
CNOT2-223ENST00000550160 HIRIP3Q9BW71 556 aaPredicted RBP16.24■□□□□ 0.19
CNOT2-223ENST00000550160 DLC1Q96QB1 1528 aa16.23■□□□□ 0.19
CNOT2-223ENST00000550160 TECPR2O15040 1411 aa16.21■□□□□ 0.19
CNOT2-223ENST00000550160 POGKQ9P215 609 aa16.21■□□□□ 0.19
CNOT2-223ENST00000550160 TMF1P82094 1093 aa16.2■□□□□ 0.18
CNOT2-223ENST00000550160 SIRT1Q96EB6 747 aa16.2■□□□□ 0.18
CNOT2-223ENST00000550160 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
CNOT2-223ENST00000550160 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
CNOT2-223ENST00000550160 CPS1P31327 1500 aa16.19■□□□□ 0.18
CNOT2-223ENST00000550160 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
CNOT2-223ENST00000550160 ARHGEF28Q8N1W1 1705 aaKnown RBP16.19■□□□□ 0.18
CNOT2-223ENST00000550160 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
CNOT2-223ENST00000550160 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
CNOT2-223ENST00000550160 PRAM1Q96QH2 718 aa16.18■□□□□ 0.18
CNOT2-223ENST00000550160 TESK2Q96S53 571 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms