RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 IQGAP3Q86VI3 1631 aa13.59□□□□□ -0.23
ERBB3-214ENST00000550070 ZMYM4Q5VZL5 1548 aa13.59□□□□□ -0.23
ERBB3-214ENST00000550070 PLEKHH2Q8IVE3 1493 aa13.59□□□□□ -0.23
ERBB3-214ENST00000550070 TTC37Q6PGP7 1564 aa13.58□□□□□ -0.24
ERBB3-214ENST00000550070 TMF1P82094 1093 aa13.58□□□□□ -0.24
ERBB3-214ENST00000550070 SKAP1Q86WV1 359 aa13.58□□□□□ -0.24
ERBB3-214ENST00000550070 EIF2AK4Q9P2K8 1649 aaKnown RBP13.58□□□□□ -0.24
ERBB3-214ENST00000550070 ARHGAP5Q13017 1502 aa13.57□□□□□ -0.24
ERBB3-214ENST00000550070 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.56□□□□□ -0.24
ERBB3-214ENST00000550070 ADAMTS8Q9UP79 889 aa13.55□□□□□ -0.24
ERBB3-214ENST00000550070 PLXNC1O60486 1568 aa13.55□□□□□ -0.24
ERBB3-214ENST00000550070 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
ERBB3-214ENST00000550070 ATP10AO60312 1499 aa13.54□□□□□ -0.24
ERBB3-214ENST00000550070 LAS1LQ9Y4W2 734 aaKnown RBP13.54□□□□□ -0.24
ERBB3-214ENST00000550070 RNF17Q9BXT8 1623 aaKnown RBP13.54□□□□□ -0.24
ERBB3-214ENST00000550070 MAGI2Q86UL8 1455 aa13.53□□□□□ -0.24
ERBB3-214ENST00000550070 WDR7Q9Y4E6 1490 aa13.52□□□□□ -0.24
ERBB3-214ENST00000550070 SHROOM2Q13796 1616 aa13.52□□□□□ -0.24
ERBB3-214ENST00000550070 DUOX2Q9NRD8 1548 aa13.52□□□□□ -0.25
ERBB3-214ENST00000550070 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
ERBB3-214ENST00000550070 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
ERBB3-214ENST00000550070 CYB5RLQ6IPT4 315 aa13.51□□□□□ -0.25
ERBB3-214ENST00000550070 DUSP27Q5VZP5 1158 aa13.5□□□□□ -0.25
ERBB3-214ENST00000550070 NEFMP07197 916 aa13.49□□□□□ -0.25
ERBB3-214ENST00000550070 KNSTRNQ9Y448 316 aa13.49□□□□□ -0.25
ERBB3-214ENST00000550070 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
ERBB3-214ENST00000550070 IQGAP1P46940 1657 aa13.48□□□□□ -0.25
ERBB3-214ENST00000550070 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
ERBB3-214ENST00000550070 ZNF521Q96K83 1311 aa13.48□□□□□ -0.25
ERBB3-214ENST00000550070 WDR43Q15061 677 aaKnown RBP eCLIP13.48□□□□□ -0.25
ERBB3-214ENST00000550070 USP35Q9P2H5 1018 aa13.46□□□□□ -0.25
ERBB3-214ENST00000550070 GOLGA2Q08379 1002 aa13.45□□□□□ -0.26
ERBB3-214ENST00000550070 TMEM132AQ24JP5 1023 aa13.45□□□□□ -0.26
ERBB3-214ENST00000550070 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
ERBB3-214ENST00000550070 PPM1GO15355 546 aaPredicted RBP13.45□□□□□ -0.26
ERBB3-214ENST00000550070 SYNMO15061 1565 aa13.44□□□□□ -0.26
ERBB3-214ENST00000550070 CENPQQ7L2Z9 268 aaPredicted RBP13.44□□□□□ -0.26
ERBB3-214ENST00000550070 DDRGK1Q96HY6 314 aa13.44□□□□□ -0.26
ERBB3-214ENST00000550070 ABCC2Q92887 1545 aa13.44□□□□□ -0.26
ERBB3-214ENST00000550070 PLCH2O75038 1416 aa13.43□□□□□ -0.26
ERBB3-214ENST00000550070 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
ERBB3-214ENST00000550070 SPHKAPQ2M3C7 1700 aa13.43□□□□□ -0.26
ERBB3-214ENST00000550070 TRAPPC8Q9Y2L5 1435 aa13.43□□□□□ -0.26
ERBB3-214ENST00000550070 SLFN5Q08AF3 891 aa13.43□□□□□ -0.26
ERBB3-214ENST00000550070 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
ERBB3-214ENST00000550070 A0A0U1RQG5 324 aaPredicted RBP13.42□□□□□ -0.26
ERBB3-214ENST00000550070 MYOM1P52179 1685 aa13.42□□□□□ -0.26
ERBB3-214ENST00000550070 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
ERBB3-214ENST00000550070 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
ERBB3-214ENST00000550070 PIK3C2GO75747 1445 aa13.42□□□□□ -0.26
ERBB3-214ENST00000550070 CEP152O94986 1710 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 AAMPQ13685 434 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 EFCAB2Q5VUJ9 269 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 TRMT2AQ8IZ69 625 aaKnown RBP13.41□□□□□ -0.26
ERBB3-214ENST00000550070 SPINK5Q9NQ38 1064 aaPredicted RBP13.41□□□□□ -0.26
ERBB3-214ENST00000550070 TRPM2O94759 1503 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 ABCC1P33527 1531 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 C8orf34Q49A92 452 aa13.41□□□□□ -0.26
ERBB3-214ENST00000550070 SCAPERQ9BY12 1400 aa13.4□□□□□ -0.26
ERBB3-214ENST00000550070 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.4□□□□□ -0.26
ERBB3-214ENST00000550070 CLTCL1P53675 1640 aa13.4□□□□□ -0.26
ERBB3-214ENST00000550070 CDK11BP21127 795 aaKnown RBP13.4□□□□□ -0.27
ERBB3-214ENST00000550070 FAM161AQ3B820 660 aa13.39□□□□□ -0.27
ERBB3-214ENST00000550070 IL27Q8NEV9 243 aa13.39□□□□□ -0.27
ERBB3-214ENST00000550070 PTPRTO14522 1441 aa13.39□□□□□ -0.27
ERBB3-214ENST00000550070 NPC1L1Q9UHC9 1359 aa13.38□□□□□ -0.27
ERBB3-214ENST00000550070 APAF1O14727 1248 aa13.38□□□□□ -0.27
ERBB3-214ENST00000550070 AFAP1Q8N556 730 aa13.37□□□□□ -0.27
ERBB3-214ENST00000550070 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
ERBB3-214ENST00000550070 ZCCHC11Q5TAX3 1644 aaKnown RBP13.37□□□□□ -0.27
ERBB3-214ENST00000550070 BCAR3O75815 825 aa13.37□□□□□ -0.27
ERBB3-214ENST00000550070 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
ERBB3-214ENST00000550070 KDM5AP29375 1690 aaKnown RBP13.36□□□□□ -0.27
ERBB3-214ENST00000550070 RGS3P49796 1198 aa13.36□□□□□ -0.27
ERBB3-214ENST00000550070 NFKBIBQ15653 356 aa13.36□□□□□ -0.27
ERBB3-214ENST00000550070 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
ERBB3-214ENST00000550070 RIMBP3CA6NJZ7 1639 aa13.35□□□□□ -0.27
ERBB3-214ENST00000550070 RIMBP3BA6NNM3 1639 aa13.35□□□□□ -0.27
ERBB3-214ENST00000550070 RIMBP3Q9UFD9 1639 aa13.35□□□□□ -0.27
ERBB3-214ENST00000550070 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
ERBB3-214ENST00000550070 PLCB2Q00722 1185 aa13.34□□□□□ -0.27
ERBB3-214ENST00000550070 EIF3AQ14152 1382 aaKnown RBP13.34□□□□□ -0.27
ERBB3-214ENST00000550070 DEPDC5O75140 1603 aa13.34□□□□□ -0.27
ERBB3-214ENST00000550070 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
ERBB3-214ENST00000550070 KIAA1210Q9ULL0 1709 aa13.34□□□□□ -0.27
ERBB3-214ENST00000550070 RTEL1-TNFRSF6BF6WH68 1400 aa13.34□□□□□ -0.27
ERBB3-214ENST00000550070 CARD14Q9BXL6 1004 aa13.33□□□□□ -0.27
ERBB3-214ENST00000550070 TET3O43151 1660 aa13.33□□□□□ -0.27
ERBB3-214ENST00000550070 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
ERBB3-214ENST00000550070 ERVK-7P63135 1459 aa13.33□□□□□ -0.28
ERBB3-214ENST00000550070 E9PSI1 815 aa13.33□□□□□ -0.28
ERBB3-214ENST00000550070 IGHDP01880 384 aa13.32□□□□□ -0.28
ERBB3-214ENST00000550070 GSE1Q14687 1217 aa13.32□□□□□ -0.28
ERBB3-214ENST00000550070 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
ERBB3-214ENST00000550070 RSPH6AQ9H0K4 717 aa13.31□□□□□ -0.28
ERBB3-214ENST00000550070 ABCA6Q8N139 1617 aa13.3□□□□□ -0.28
ERBB3-214ENST00000550070 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
ERBB3-214ENST00000550070 VWDEQ8N2E2 1590 aa13.3□□□□□ -0.28
ERBB3-214ENST00000550070 MAP3K4Q9Y6R4 1608 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms