RNA–Protein interactions for RNA: ENST00000550023.5

KRR1-203, Transcript of KRR1, small subunit processome component homolog, humanhuman

TSL 2

Gene KRR1, Length 855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-203ENST00000550023 CRIPAKQ8N1N5 446 aa9.2□□□□□ -0.94
KRR1-203ENST00000550023 PRR14Q9BWN1 585 aa9.2□□□□□ -0.94
KRR1-203ENST00000550023 TSR1Q2NL82 804 aaKnown RBP9.19□□□□□ -0.94
KRR1-203ENST00000550023 CERKQ8TCT0 537 aa9.19□□□□□ -0.94
KRR1-203ENST00000550023 GMPR2Q9P2T1 348 aaKnown RBP9.19□□□□□ -0.94
KRR1-203ENST00000550023 NBR1Q14596 966 aa9.18□□□□□ -0.94
KRR1-203ENST00000550023 SLF2Q8IX21 1173 aa9.18□□□□□ -0.94
KRR1-203ENST00000550023 AXIN1O15169 862 aa9.17□□□□□ -0.94
KRR1-203ENST00000550023 NKX1-1Q15270 411 aaPredicted RBP9.17□□□□□ -0.94
KRR1-203ENST00000550023 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
KRR1-203ENST00000550023 PCDHB3Q9Y5E6 796 aa9.17□□□□□ -0.94
KRR1-203ENST00000550023 DNAJC5Q9H3Z4 198 aa9.16□□□□□ -0.94
KRR1-203ENST00000550023 LMOD2Q6P5Q4 547 aa9.15□□□□□ -0.94
KRR1-203ENST00000550023 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
KRR1-203ENST00000550023 DPYSL4O14531 572 aa9.14□□□□□ -0.95
KRR1-203ENST00000550023 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
KRR1-203ENST00000550023 CTC1Q2NKJ3 1217 aa9.13□□□□□ -0.95
KRR1-203ENST00000550023 NUDT18Q6ZVK8 323 aa9.13□□□□□ -0.95
KRR1-203ENST00000550023 FAM198AQ9UFP1 575 aa9.13□□□□□ -0.95
KRR1-203ENST00000550023 PPEF1O14829 653 aaPredicted RBP9.12□□□□□ -0.95
KRR1-203ENST00000550023 SCRIBQ14160 1630 aa9.12□□□□□ -0.95
KRR1-203ENST00000550023 TERTO14746 1132 aaKnown RBP9.11□□□□□ -0.95
KRR1-203ENST00000550023 FOXC1Q12948 553 aa9.11□□□□□ -0.95
KRR1-203ENST00000550023 C3orf80F5H4A9 247 aa9.1□□□□□ -0.95
KRR1-203ENST00000550023 S1PR4O95977 384 aa9.1□□□□□ -0.95
KRR1-203ENST00000550023 AVPP01185 164 aa9.1□□□□□ -0.95
KRR1-203ENST00000550023 SWT1Q5T5J6 900 aaKnown RBP9.1□□□□□ -0.95
KRR1-203ENST00000550023 BLOC1S3Q6QNY0 202 aa9.09□□□□□ -0.95
KRR1-203ENST00000550023 TLL1O43897 1013 aa9.08□□□□□ -0.96
KRR1-203ENST00000550023 RB1CC1Q8TDY2 1594 aa9.07□□□□□ -0.96
KRR1-203ENST00000550023 SMCPP49901 116 aaPredicted RBP9.06□□□□□ -0.96
KRR1-203ENST00000550023 CYP4X1Q8N118 509 aa9.06□□□□□ -0.96
KRR1-203ENST00000550023 CAMK2BQ13554 666 aa9.05□□□□□ -0.96
KRR1-203ENST00000550023 PKD2L1Q9P0L9 805 aa9.05□□□□□ -0.96
KRR1-203ENST00000550023 SLC16A10Q8TF71 515 aa9.04□□□□□ -0.96
KRR1-203ENST00000550023 RBM27Q9P2N5 1060 aaKnown RBP9.04□□□□□ -0.96
KRR1-203ENST00000550023 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
KRR1-203ENST00000550023 SENP2Q9HC62 589 aa9.03□□□□□ -0.96
KRR1-203ENST00000550023 SUPT5HO00267 1087 aaKnown RBP9.02□□□□□ -0.97
KRR1-203ENST00000550023 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
KRR1-203ENST00000550023 RSF1Q96T23 1441 aaPredicted RBP9.02□□□□□ -0.97
KRR1-203ENST00000550023 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
KRR1-203ENST00000550023 ADH1BP00325 375 aa9□□□□□ -0.97
KRR1-203ENST00000550023 SLC6A16Q9GZN6 736 aa9□□□□□ -0.97
KRR1-203ENST00000550023 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
KRR1-203ENST00000550023 GTPBP6O43824 516 aaPredicted RBP8.98□□□□□ -0.97
KRR1-203ENST00000550023 DCAF8L2P0C7V8 631 aa8.98□□□□□ -0.97
KRR1-203ENST00000550023 KMT5BQ4FZB7 885 aa8.98□□□□□ -0.97
KRR1-203ENST00000550023 PLA2G2CQ5R387 149 aa8.98□□□□□ -0.97
KRR1-203ENST00000550023 TRIM47Q96LD4 638 aa8.98□□□□□ -0.97
KRR1-203ENST00000550023 ATP13A2Q9NQ11 1180 aa8.98□□□□□ -0.97
KRR1-203ENST00000550023 CD2BP2O95400 341 aaKnown RBP8.97□□□□□ -0.97
KRR1-203ENST00000550023 SPDYE16A6NNV3 312 aaPredicted RBP8.96□□□□□ -0.98
KRR1-203ENST00000550023 NR1I2O75469 434 aa8.96□□□□□ -0.98
KRR1-203ENST00000550023 KIFC2Q96AC6 838 aa8.96□□□□□ -0.98
KRR1-203ENST00000550023 BAZ1AQ9NRL2 1556 aaPredicted RBP8.95□□□□□ -0.98
KRR1-203ENST00000550023 TTC24A2A3L6 582 aaPredicted RBP8.95□□□□□ -0.98
KRR1-203ENST00000550023 RPIAP49247 311 aa8.95□□□□□ -0.98
KRR1-203ENST00000550023 PDIA6Q15084 440 aa8.95□□□□□ -0.98
KRR1-203ENST00000550023 ACTN4O43707 911 aaKnown RBP8.93□□□□□ -0.98
KRR1-203ENST00000550023 GMPRP36959 345 aa8.92□□□□□ -0.98
KRR1-203ENST00000550023 IRF7Q92985 503 aa8.92□□□□□ -0.98
KRR1-203ENST00000550023 GRXCR2A6NFK2 248 aa8.91□□□□□ -0.98
KRR1-203ENST00000550023 PADI6Q6TGC4 694 aa8.9□□□□□ -0.98
KRR1-203ENST00000550023 CADPS2Q86UW7 1296 aa8.9□□□□□ -0.98
KRR1-203ENST00000550023 CDHR5Q9HBB8 845 aa8.9□□□□□ -0.98
KRR1-203ENST00000550023 EIF4G1Q04637 1599 aaKnown RBP8.9□□□□□ -0.99
KRR1-203ENST00000550023 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
KRR1-203ENST00000550023 TTC13Q8NBP0 860 aa8.88□□□□□ -0.99
KRR1-203ENST00000550023 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
KRR1-203ENST00000550023 PRIM1P49642 420 aaKnown RBP8.87□□□□□ -0.99
KRR1-203ENST00000550023 EYA1Q99502 592 aa8.87□□□□□ -0.99
KRR1-203ENST00000550023 MROH2BQ7Z745 1585 aa8.86□□□□□ -0.99
KRR1-203ENST00000550023 CFHP08603 1231 aa8.86□□□□□ -0.99
KRR1-203ENST00000550023 NPAS3Q8IXF0 933 aa8.86□□□□□ -0.99
KRR1-203ENST00000550023 KCTD17Q8N5Z5 321 aa8.85□□□□□ -0.99
KRR1-203ENST00000550023 TOP2AP11388 1531 aaKnown RBP8.85□□□□□ -0.99
KRR1-203ENST00000550023 SMARCA4P51532 1647 aa8.84□□□□□ -0.99
KRR1-203ENST00000550023 DNAJB2P25686 324 aa8.84□□□□□ -0.99
KRR1-203ENST00000550023 SPSB2Q99619 263 aa8.84□□□□□ -0.99
KRR1-203ENST00000550023 PEG3Q9GZU2 1588 aa8.83□□□□□ -1
KRR1-203ENST00000550023 SNIP1Q8TAD8 396 aaKnown RBP8.83□□□□□ -1
KRR1-203ENST00000550023 CECR2Q9BXF3 1484 aa8.83□□□□□ -1
KRR1-203ENST00000550023 UNC13AQ9UPW8 1703 aa8.83□□□□□ -1
KRR1-203ENST00000550023 SMPD1P17405 629 aa8.82□□□□□ -1
KRR1-203ENST00000550023 SCUBE3Q8IX30 993 aa8.82□□□□□ -1
KRR1-203ENST00000550023 FCF1Q9Y324 198 aaKnown RBP8.82□□□□□ -1
KRR1-203ENST00000550023 ZBTB24O43167 697 aaPredicted RBP8.81□□□□□ -1
KRR1-203ENST00000550023 KCNMA1Q12791 1236 aa8.8□□□□□ -1
KRR1-203ENST00000550023 OSBPP22059 807 aa8.79□□□□□ -1
KRR1-203ENST00000550023 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
KRR1-203ENST00000550023 WNT7AO00755 349 aa8.77□□□□□ -1.01
KRR1-203ENST00000550023 RBM46Q8TBY0 533 aaKnown RBP8.77□□□□□ -1.01
KRR1-203ENST00000550023 WIZO95785 1651 aa8.77□□□□□ -1.01
KRR1-203ENST00000550023 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
KRR1-203ENST00000550023 H3BM21 787 aa8.75□□□□□ -1.01
KRR1-203ENST00000550023 TMEM151AQ8N4L1 468 aa8.75□□□□□ -1.01
KRR1-203ENST00000550023 NPDC1Q9NQX5 325 aaPredicted RBP8.75□□□□□ -1.01
KRR1-203ENST00000550023 VEGFBP49765 207 aa8.74□□□□□ -1.01
KRR1-203ENST00000550023 J3QL48 77 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms