RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 DEFB132Q7Z7B7 95 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 EHBP1L1Q8N3D4 1523 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 BRINP3Q76B58 766 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 DCAF11Q8TEB1 546 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 CFAP74Q9C0B2 1584 aa10.44□□□□□ -0.74
FGD6-205ENST00000549499 PCGF6Q9BYE7 350 aa10.43□□□□□ -0.74
FGD6-205ENST00000549499 CHRNA2Q15822 529 aa10.43□□□□□ -0.74
FGD6-205ENST00000549499 WWC3Q9ULE0 1092 aa10.43□□□□□ -0.74
FGD6-205ENST00000549499 AFF2P51816 1311 aa10.42□□□□□ -0.74
FGD6-205ENST00000549499 ADGRF5Q8IZF2 1346 aa10.42□□□□□ -0.74
FGD6-205ENST00000549499 ZC3H6P61129 1189 aaKnown RBP10.42□□□□□ -0.74
FGD6-205ENST00000549499 C19orf44Q9H6X5 657 aa10.42□□□□□ -0.74
FGD6-205ENST00000549499 A2ML1A8K2U0 1454 aa10.42□□□□□ -0.74
FGD6-205ENST00000549499 HDGFP51858 240 aaKnown RBP10.41□□□□□ -0.74
FGD6-205ENST00000549499 SLC52A1Q9NWF4 448 aa10.41□□□□□ -0.74
FGD6-205ENST00000549499 METP08581 1390 aa10.41□□□□□ -0.74
FGD6-205ENST00000549499 PREX1Q8TCU6 1659 aa10.4□□□□□ -0.74
FGD6-205ENST00000549499 RXRBP28702 533 aa10.4□□□□□ -0.74
FGD6-205ENST00000549499 SCAF11Q99590 1463 aaKnown RBP10.4□□□□□ -0.75
FGD6-205ENST00000549499 CADPS2Q86UW7 1296 aa10.4□□□□□ -0.75
FGD6-205ENST00000549499 SIN3AQ96ST3 1273 aa10.4□□□□□ -0.75
FGD6-205ENST00000549499 RIMS2Q9UQ26 1411 aa10.4□□□□□ -0.75
FGD6-205ENST00000549499 PTPRTO14522 1441 aa10.39□□□□□ -0.75
FGD6-205ENST00000549499 USP21Q9UK80 565 aa10.39□□□□□ -0.75
FGD6-205ENST00000549499 DNMT1P26358 1616 aaKnown RBP10.39□□□□□ -0.75
FGD6-205ENST00000549499 LTBP4Q8N2S1 1624 aa10.39□□□□□ -0.75
FGD6-205ENST00000549499 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
FGD6-205ENST00000549499 PSME1Q06323 249 aa10.38□□□□□ -0.75
FGD6-205ENST00000549499 MPHOSPH9Q99550 1183 aa10.37□□□□□ -0.75
FGD6-205ENST00000549499 PZPP20742 1482 aa10.37□□□□□ -0.75
FGD6-205ENST00000549499 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
FGD6-205ENST00000549499 PRAM1Q96QH2 718 aa10.37□□□□□ -0.75
FGD6-205ENST00000549499 SPATA31D1Q6ZQQ2 1576 aa10.37□□□□□ -0.75
FGD6-205ENST00000549499 CEP152O94986 1710 aa10.36□□□□□ -0.75
FGD6-205ENST00000549499 KLHL34Q8N239 644 aa10.36□□□□□ -0.75
FGD6-205ENST00000549499 ABCC3O15438 1527 aa10.36□□□□□ -0.75
FGD6-205ENST00000549499 NGDNQ8NEJ9 315 aaKnown RBP10.36□□□□□ -0.75
FGD6-205ENST00000549499 PTPN23Q9H3S7 1636 aa10.35□□□□□ -0.75
FGD6-205ENST00000549499 FAM98CQ17RN3 349 aaKnown RBP10.35□□□□□ -0.75
FGD6-205ENST00000549499 KDM5DQ9BY66 1539 aa10.34□□□□□ -0.75
FGD6-205ENST00000549499 MYO3AQ8NEV4 1616 aa10.34□□□□□ -0.75
FGD6-205ENST00000549499 RTEL1-TNFRSF6BF6WH68 1400 aa10.34□□□□□ -0.75
FGD6-205ENST00000549499 TCOF1Q13428 1488 aaKnown RBP10.34□□□□□ -0.75
FGD6-205ENST00000549499 PRDM15P57071 1507 aaPredicted RBP10.33□□□□□ -0.76
FGD6-205ENST00000549499 PLEKHH1Q9ULM0 1364 aa10.33□□□□□ -0.76
FGD6-205ENST00000549499 FBLN1P23142 703 aa10.32□□□□□ -0.76
FGD6-205ENST00000549499 AGLP35573 1532 aa10.32□□□□□ -0.76
FGD6-205ENST00000549499 ERBINQ96RT1 1412 aa10.32□□□□□ -0.76
FGD6-205ENST00000549499 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.31□□□□□ -0.76
FGD6-205ENST00000549499 LRRC59Q96AG4 307 aaKnown RBP10.31□□□□□ -0.76
FGD6-205ENST00000549499 VGFO15240 615 aaPredicted RBP10.31□□□□□ -0.76
FGD6-205ENST00000549499 TBX22Q9Y458 520 aa10.31□□□□□ -0.76
FGD6-205ENST00000549499 INO80Q9ULG1 1556 aaPredicted RBP10.31□□□□□ -0.76
FGD6-205ENST00000549499 SRPK2P78362 688 aaKnown RBP10.31□□□□□ -0.76
FGD6-205ENST00000549499 LTV1Q96GA3 475 aaPredicted RBP10.31□□□□□ -0.76
FGD6-205ENST00000549499 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
FGD6-205ENST00000549499 NOS1P29475 1434 aa10.3□□□□□ -0.76
FGD6-205ENST00000549499 NBPF1Q3BBV0 1214 aa10.3□□□□□ -0.76
FGD6-205ENST00000549499 TMC1Q8TDI8 760 aa10.3□□□□□ -0.76
FGD6-205ENST00000549499 PPP1R1BQ9UD71 204 aaPredicted RBP10.3□□□□□ -0.76
FGD6-205ENST00000549499 KRT28Q7Z3Y7 464 aa10.3□□□□□ -0.76
FGD6-205ENST00000549499 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.28□□□□□ -0.76
FGD6-205ENST00000549499 ROBO2Q9HCK4 1378 aa10.28□□□□□ -0.76
FGD6-205ENST00000549499 CABP2Q9NPB3 220 aa10.28□□□□□ -0.76
FGD6-205ENST00000549499 BTG4Q9NY30 223 aa10.28□□□□□ -0.76
FGD6-205ENST00000549499 PTPRUQ92729 1446 aa10.27□□□□□ -0.76
FGD6-205ENST00000549499 EFCAB6Q5THR3 1501 aa10.27□□□□□ -0.76
FGD6-205ENST00000549499 KCNQ4P56696 695 aa10.27□□□□□ -0.77
FGD6-205ENST00000549499 PIK3C2BO00750 1634 aa10.27□□□□□ -0.77
FGD6-205ENST00000549499 NLRP1Q9C000 1473 aa10.27□□□□□ -0.77
FGD6-205ENST00000549499 EVA1CP58658 441 aa10.27□□□□□ -0.77
FGD6-205ENST00000549499 DUOX2Q9NRD8 1548 aa10.26□□□□□ -0.77
FGD6-205ENST00000549499 EN1Q05925 392 aaPredicted RBP10.26□□□□□ -0.77
FGD6-205ENST00000549499 PRDM11Q9NQV5 511 aa10.26□□□□□ -0.77
FGD6-205ENST00000549499 NEURL4Q96JN8 1562 aa10.26□□□□□ -0.77
FGD6-205ENST00000549499 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
FGD6-205ENST00000549499 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
FGD6-205ENST00000549499 JCADQ9P266 1359 aa10.25□□□□□ -0.77
FGD6-205ENST00000549499 ZNF772Q68DY9 489 aaPredicted RBP10.25□□□□□ -0.77
FGD6-205ENST00000549499 PLXNC1O60486 1568 aa10.24□□□□□ -0.77
FGD6-205ENST00000549499 TRIM37O94972 964 aa10.24□□□□□ -0.77
FGD6-205ENST00000549499 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
FGD6-205ENST00000549499 STRCP1A6NGW2 1772 aa10.24□□□□□ -0.77
FGD6-205ENST00000549499 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
FGD6-205ENST00000549499 TNNT2P45379 298 aaPredicted RBP10.24□□□□□ -0.77
FGD6-205ENST00000549499 R3HDM1Q15032 1099 aaKnown RBP10.24□□□□□ -0.77
FGD6-205ENST00000549499 PELP1Q8IZL8 1130 aaKnown RBP10.24□□□□□ -0.77
FGD6-205ENST00000549499 CSB-PGBD3P0DP91 1061 aa10.23□□□□□ -0.77
FGD6-205ENST00000549499 PHF8Q9UPP1 1060 aa10.23□□□□□ -0.77
FGD6-205ENST00000549499 PLA2R1Q13018 1463 aa10.23□□□□□ -0.77
FGD6-205ENST00000549499 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
FGD6-205ENST00000549499 SYTL4Q96C24 671 aaPredicted RBP10.23□□□□□ -0.77
FGD6-205ENST00000549499 RNF17Q9BXT8 1623 aaKnown RBP10.22□□□□□ -0.77
FGD6-205ENST00000549499 ABTB2Q8N961 1025 aa10.22□□□□□ -0.77
FGD6-205ENST00000549499 ZRANB1Q9UGI0 708 aa10.22□□□□□ -0.77
FGD6-205ENST00000549499 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
FGD6-205ENST00000549499 CCDC144AA2RUR9 1427 aa10.21□□□□□ -0.78
FGD6-205ENST00000549499 RBM6P78332 1123 aaKnown RBP10.2□□□□□ -0.78
FGD6-205ENST00000549499 PTF1AQ7RTS3 328 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms