RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 TET3O43151 1660 aa11.1□□□□□ -0.63
LIN7A-202ENST00000549417 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
LIN7A-202ENST00000549417 NWD1Q149M9 1564 aa11.09□□□□□ -0.63
LIN7A-202ENST00000549417 RBM6P78332 1123 aaKnown RBP11.09□□□□□ -0.63
LIN7A-202ENST00000549417 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
LIN7A-202ENST00000549417 ATAD2Q6PL18 1390 aa11.08□□□□□ -0.64
LIN7A-202ENST00000549417 AHDC1Q5TGY3 1603 aaPredicted RBP11.08□□□□□ -0.64
LIN7A-202ENST00000549417 TSPY4P0CV99 314 aa11.07□□□□□ -0.64
LIN7A-202ENST00000549417 TSPY10P0CW01 314 aa11.07□□□□□ -0.64
LIN7A-202ENST00000549417 DIP2AQ14689 1571 aa11.07□□□□□ -0.64
LIN7A-202ENST00000549417 EFCAB6Q5THR3 1501 aa11.06□□□□□ -0.64
LIN7A-202ENST00000549417 IDI1Q13907 227 aa11.05□□□□□ -0.64
LIN7A-202ENST00000549417 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.04□□□□□ -0.64
LIN7A-202ENST00000549417 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
LIN7A-202ENST00000549417 ATF3P18847 181 aa11.04□□□□□ -0.64
LIN7A-202ENST00000549417 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
LIN7A-202ENST00000549417 BRINP3Q76B58 766 aa11.04□□□□□ -0.64
LIN7A-202ENST00000549417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIN7A-202ENST00000549417 CHD2O14647 1828 aaKnown RBP11.04□□□□□ -0.64
LIN7A-202ENST00000549417 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
LIN7A-202ENST00000549417 EIF2AK4Q9P2K8 1649 aaKnown RBP11.03□□□□□ -0.64
LIN7A-202ENST00000549417 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
LIN7A-202ENST00000549417 ARHGEF5Q12774 1597 aa11.03□□□□□ -0.64
LIN7A-202ENST00000549417 CEP162Q5TB80 1403 aa11.02□□□□□ -0.64
LIN7A-202ENST00000549417 CADPS2Q86UW7 1296 aa11.02□□□□□ -0.65
LIN7A-202ENST00000549417 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.65
LIN7A-202ENST00000549417 NGLY1Q96IV0 654 aa11.02□□□□□ -0.65
LIN7A-202ENST00000549417 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
LIN7A-202ENST00000549417 C19orf44Q9H6X5 657 aa11□□□□□ -0.65
LIN7A-202ENST00000549417 PPP1R15AO75807 674 aaPredicted RBP10.99□□□□□ -0.65
LIN7A-202ENST00000549417 USP21Q9UK80 565 aa10.98□□□□□ -0.65
LIN7A-202ENST00000549417 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
LIN7A-202ENST00000549417 ADGRB3O60242 1522 aa10.98□□□□□ -0.65
LIN7A-202ENST00000549417 ASXL1Q8IXJ9 1541 aa10.98□□□□□ -0.65
LIN7A-202ENST00000549417 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
LIN7A-202ENST00000549417 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
LIN7A-202ENST00000549417 MYO5BQ9ULV0 1848 aa10.97□□□□□ -0.65
LIN7A-202ENST00000549417 NCOA3Q9Y6Q9 1424 aa10.96□□□□□ -0.65
LIN7A-202ENST00000549417 DEFB132Q7Z7B7 95 aa10.96□□□□□ -0.65
LIN7A-202ENST00000549417 TRPC5Q9UL62 973 aaPredicted RBP10.96□□□□□ -0.65
LIN7A-202ENST00000549417 LRP5O75197 1615 aa10.95□□□□□ -0.66
LIN7A-202ENST00000549417 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
LIN7A-202ENST00000549417 DUOX2Q9NRD8 1548 aa10.95□□□□□ -0.66
LIN7A-202ENST00000549417 PLEKHG1Q9ULL1 1385 aa10.95□□□□□ -0.66
LIN7A-202ENST00000549417 CCDC125Q86Z20 511 aa10.95□□□□□ -0.66
LIN7A-202ENST00000549417 PSDA5PKW4 1024 aaPredicted RBP10.94□□□□□ -0.66
LIN7A-202ENST00000549417 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
LIN7A-202ENST00000549417 ZFYVE9O95405 1425 aa10.93□□□□□ -0.66
LIN7A-202ENST00000549417 RIMS2Q9UQ26 1411 aa10.93□□□□□ -0.66
LIN7A-202ENST00000549417 CNKSR2Q8WXI2 1034 aa10.93□□□□□ -0.66
LIN7A-202ENST00000549417 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
LIN7A-202ENST00000549417 KANK1Q14678 1352 aa10.92□□□□□ -0.66
LIN7A-202ENST00000549417 KIF15Q9NS87 1388 aa10.92□□□□□ -0.66
LIN7A-202ENST00000549417 ATRNO75882 1429 aa10.92□□□□□ -0.66
LIN7A-202ENST00000549417 AMOTL2Q9Y2J4 779 aa10.91□□□□□ -0.66
LIN7A-202ENST00000549417 GCC2Q8IWJ2 1684 aa10.91□□□□□ -0.66
LIN7A-202ENST00000549417 MST1RQ04912 1400 aa10.91□□□□□ -0.66
LIN7A-202ENST00000549417 CHGAP10645 457 aaKnown RBP10.9□□□□□ -0.66
LIN7A-202ENST00000549417 NOS1P29475 1434 aa10.9□□□□□ -0.66
LIN7A-202ENST00000549417 BLMP54132 1417 aaPredicted RBP10.9□□□□□ -0.66
LIN7A-202ENST00000549417 ADAMTS13Q76LX8 1427 aa10.9□□□□□ -0.66
LIN7A-202ENST00000549417 HRCP23327 699 aa10.89□□□□□ -0.67
LIN7A-202ENST00000549417 YY1P25490 414 aa10.89□□□□□ -0.67
LIN7A-202ENST00000549417 FNBP4Q8N3X1 1017 aaPredicted RBP10.89□□□□□ -0.67
LIN7A-202ENST00000549417 SLC52A1Q9NWF4 448 aa10.89□□□□□ -0.67
LIN7A-202ENST00000549417 PTPRUQ92729 1446 aa10.89□□□□□ -0.67
LIN7A-202ENST00000549417 ERBINQ96RT1 1412 aa10.89□□□□□ -0.67
LIN7A-202ENST00000549417 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
LIN7A-202ENST00000549417 SF3B2Q13435 895 aaKnown RBP10.87□□□□□ -0.67
LIN7A-202ENST00000549417 DCCP43146 1447 aa10.86□□□□□ -0.67
LIN7A-202ENST00000549417 LMTK2Q8IWU2 1503 aa10.86□□□□□ -0.67
LIN7A-202ENST00000549417 GJD4Q96KN9 370 aaPredicted RBP10.86□□□□□ -0.67
LIN7A-202ENST00000549417 TMEM131LA2VDJ0 1609 aa10.86□□□□□ -0.67
LIN7A-202ENST00000549417 BCL9LQ86UU0 1499 aa10.86□□□□□ -0.67
LIN7A-202ENST00000549417 TRPM2O94759 1503 aa10.85□□□□□ -0.67
LIN7A-202ENST00000549417 HOXD11P31277 338 aaPredicted RBP10.85□□□□□ -0.67
LIN7A-202ENST00000549417 BRWD3Q6RI45 1802 aa10.85□□□□□ -0.67
LIN7A-202ENST00000549417 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.84□□□□□ -0.67
LIN7A-202ENST00000549417 CHIC2Q9UKJ5 165 aa10.84□□□□□ -0.67
LIN7A-202ENST00000549417 PIK3R4Q99570 1358 aa10.84□□□□□ -0.67
LIN7A-202ENST00000549417 PTCH1Q13635 1447 aa10.84□□□□□ -0.67
LIN7A-202ENST00000549417 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
LIN7A-202ENST00000549417 CROCC2H7BZ55 1655 aa10.82□□□□□ -0.68
LIN7A-202ENST00000549417 DCAF8L1A6NGE4 600 aa10.82□□□□□ -0.68
LIN7A-202ENST00000549417 ORAI2Q96SN7 254 aa10.82□□□□□ -0.68
LIN7A-202ENST00000549417 C1orf167Q5SNV9 1468 aa10.81□□□□□ -0.68
LIN7A-202ENST00000549417 NALCNQ8IZF0 1738 aa10.81□□□□□ -0.68
LIN7A-202ENST00000549417 XRN1Q8IZH2 1706 aaKnown RBP10.81□□□□□ -0.68
LIN7A-202ENST00000549417 R3HDM1Q15032 1099 aaKnown RBP10.81□□□□□ -0.68
LIN7A-202ENST00000549417 ABCC5O15440 1437 aa10.81□□□□□ -0.68
LIN7A-202ENST00000549417 GLI3P10071 1580 aa10.81□□□□□ -0.68
LIN7A-202ENST00000549417 SOS2Q07890 1332 aaPredicted RBP10.81□□□□□ -0.68
LIN7A-202ENST00000549417 RALGAPBQ86X10 1494 aa10.81□□□□□ -0.68
LIN7A-202ENST00000549417 NCBP3Q53F19 620 aaKnown RBP10.8□□□□□ -0.68
LIN7A-202ENST00000549417 IFFO2Q5TF58 517 aa10.8□□□□□ -0.68
LIN7A-202ENST00000549417 RNF216Q9NWF9 866 aaPredicted RBP10.8□□□□□ -0.68
LIN7A-202ENST00000549417 UNC13BO14795 1591 aa10.8□□□□□ -0.68
LIN7A-202ENST00000549417 MARF1Q9Y4F3 1742 aaKnown RBP10.79□□□□□ -0.68
LIN7A-202ENST00000549417 ADGRL3Q9HAR2 1447 aa10.79□□□□□ -0.68
LIN7A-202ENST00000549417 SEPT12Q8IYM1 358 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms