RNA–Protein interactions for RNA: ENST00000549287.1

TMEM106C-211, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-211ENST00000549287 NEURL4Q96JN8 1562 aa10.1□□□□□ -0.79
TMEM106C-211ENST00000549287 RRP1P56182 461 aaKnown RBP10.1□□□□□ -0.79
TMEM106C-211ENST00000549287 IRX6P78412 446 aaPredicted RBP10.1□□□□□ -0.79
TMEM106C-211ENST00000549287 ARAP3Q8WWN8 1544 aa10.09□□□□□ -0.79
TMEM106C-211ENST00000549287 AAMPQ13685 434 aa10.09□□□□□ -0.79
TMEM106C-211ENST00000549287 REM2Q8IYK8 340 aaPredicted RBP10.09□□□□□ -0.79
TMEM106C-211ENST00000549287 PRDM15P57071 1507 aaPredicted RBP10.08□□□□□ -0.8
TMEM106C-211ENST00000549287 CDC42BPBQ9Y5S2 1711 aa10.08□□□□□ -0.8
TMEM106C-211ENST00000549287 PPM1GO15355 546 aaPredicted RBP10.08□□□□□ -0.8
TMEM106C-211ENST00000549287 UHRF1BP1LA0JNW5 1464 aa10.08□□□□□ -0.8
TMEM106C-211ENST00000549287 PLCH2O75038 1416 aa10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 SCAPERQ9BY12 1400 aa10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 SAMD9LQ8IVG5 1584 aa10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 MAGI2Q86UL8 1455 aa10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 COL17A1Q9UMD9 1497 aaPredicted RBP10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 RTN4Q9NQC3 1192 aaKnown RBP10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 ARHGAP5Q13017 1502 aa10.07□□□□□ -0.8
TMEM106C-211ENST00000549287 KANK1Q14678 1352 aa10.06□□□□□ -0.8
TMEM106C-211ENST00000549287 KNSTRNQ9Y448 316 aa10.06□□□□□ -0.8
TMEM106C-211ENST00000549287 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
TMEM106C-211ENST00000549287 WDR7Q9Y4E6 1490 aa10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 SHROOM2Q13796 1616 aa10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 IFNLR1Q8IU57 520 aaPredicted RBP10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 STAG3Q9UJ98 1225 aa10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 ABCC2Q92887 1545 aa10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 BLMP54132 1417 aaPredicted RBP10.05□□□□□ -0.8
TMEM106C-211ENST00000549287 TESK2Q96S53 571 aa10.04□□□□□ -0.8
TMEM106C-211ENST00000549287 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMEM106C-211ENST00000549287 PANK3Q9H999 370 aa10.03□□□□□ -0.8
TMEM106C-211ENST00000549287 KIAA1210Q9ULL0 1709 aa10.03□□□□□ -0.8
TMEM106C-211ENST00000549287 CLEC11AQ9Y240 323 aa10.03□□□□□ -0.8
TMEM106C-211ENST00000549287 A2MP01023 1474 aa10.03□□□□□ -0.8
TMEM106C-211ENST00000549287 CENPQQ7L2Z9 268 aaPredicted RBP10.02□□□□□ -0.81
TMEM106C-211ENST00000549287 PUS7Q96PZ0 661 aaKnown RBP10.02□□□□□ -0.81
TMEM106C-211ENST00000549287 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.02□□□□□ -0.81
TMEM106C-211ENST00000549287 PTPRTO14522 1441 aa10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 PIK3C2GO75747 1445 aa10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 BACH2Q9BYV9 841 aa10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 PLA2R1Q13018 1463 aa10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 NINLQ9Y2I6 1382 aa10.01□□□□□ -0.81
TMEM106C-211ENST00000549287 SCAF11Q99590 1463 aaKnown RBP10□□□□□ -0.81
TMEM106C-211ENST00000549287 PDE4AP27815 886 aa10□□□□□ -0.81
TMEM106C-211ENST00000549287 GOLGA2Q08379 1002 aa10□□□□□ -0.81
TMEM106C-211ENST00000549287 RGL3Q3MIN7 710 aa10□□□□□ -0.81
TMEM106C-211ENST00000549287 BCL11AQ9H165 835 aa10□□□□□ -0.81
TMEM106C-211ENST00000549287 SYCP2Q9BX26 1530 aa10□□□□□ -0.81
TMEM106C-211ENST00000549287 CLASP1Q7Z460 1538 aa9.99□□□□□ -0.81
TMEM106C-211ENST00000549287 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
TMEM106C-211ENST00000549287 SPAG9O60271 1321 aaKnown RBP9.99□□□□□ -0.81
TMEM106C-211ENST00000549287 SYNMO15061 1565 aa9.98□□□□□ -0.81
TMEM106C-211ENST00000549287 RNF17Q9BXT8 1623 aaKnown RBP9.98□□□□□ -0.81
TMEM106C-211ENST00000549287 NBPF1Q3BBV0 1214 aa9.98□□□□□ -0.81
TMEM106C-211ENST00000549287 AMER1Q5JTC6 1135 aaPredicted RBP9.98□□□□□ -0.81
TMEM106C-211ENST00000549287 TRPM2O94759 1503 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 PITPNM1O00562 1244 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 PLCD3Q8N3E9 789 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 SBNO2Q9Y2G9 1366 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 ASXL1Q8IXJ9 1541 aa9.97□□□□□ -0.81
TMEM106C-211ENST00000549287 E9PSI1 815 aa9.96□□□□□ -0.82
TMEM106C-211ENST00000549287 PPP2R1AP30153 589 aa9.96□□□□□ -0.82
TMEM106C-211ENST00000549287 DEKP35659 375 aaKnown RBP9.96□□□□□ -0.82
TMEM106C-211ENST00000549287 RPGRIP1LQ68CZ1 1315 aa9.96□□□□□ -0.82
TMEM106C-211ENST00000549287 PDE3AQ14432 1141 aa9.95□□□□□ -0.82
TMEM106C-211ENST00000549287 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
TMEM106C-211ENST00000549287 ABCC1P33527 1531 aa9.95□□□□□ -0.82
TMEM106C-211ENST00000549287 CEP152O94986 1710 aa9.95□□□□□ -0.82
TMEM106C-211ENST00000549287 TET3O43151 1660 aa9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 IQGAP1P46940 1657 aa9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 ZMYM3Q14202 1370 aa9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 SLFN5Q08AF3 891 aa9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 CC2D1BQ5T0F9 858 aaKnown RBP9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 ADAMTS8Q9UP79 889 aa9.94□□□□□ -0.82
TMEM106C-211ENST00000549287 TTC37Q6PGP7 1564 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 MYOM2P54296 1465 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 DISP3Q9P2K9 1392 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 CGNL1Q0VF96 1302 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 ZNF521Q96K83 1311 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 PRR29P0C7W0 189 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 KLHL34Q8N239 644 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 SPHKAPQ2M3C7 1700 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 DEPDC5O75140 1603 aa9.93□□□□□ -0.82
TMEM106C-211ENST00000549287 FAM161AQ3B820 660 aa9.92□□□□□ -0.82
TMEM106C-211ENST00000549287 DUSP27Q5VZP5 1158 aa9.92□□□□□ -0.82
TMEM106C-211ENST00000549287 MADDQ8WXG6 1647 aa9.92□□□□□ -0.82
TMEM106C-211ENST00000549287 POLR3AO14802 1390 aaPredicted RBP9.91□□□□□ -0.82
TMEM106C-211ENST00000549287 CHD1O14646 1710 aa9.91□□□□□ -0.82
TMEM106C-211ENST00000549287 CT47B1P0C2W7 299 aaPredicted RBP9.91□□□□□ -0.82
TMEM106C-211ENST00000549287 VWDEQ8N2E2 1590 aa9.91□□□□□ -0.82
TMEM106C-211ENST00000549287 KDM5AP29375 1690 aaKnown RBP9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 MAPK8IP3Q9UPT6 1336 aa9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 CNGB1Q14028 1251 aaPredicted RBP9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 WDR63Q8IWG1 891 aa9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 PNNQ9H307 717 aaKnown RBP9.9□□□□□ -0.82
TMEM106C-211ENST00000549287 NKTRP30414 1462 aaKnown RBP9.9□□□□□ -0.83
TMEM106C-211ENST00000549287 ZCCHC11Q5TAX3 1644 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms