RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 RALBP1Q15311 655 aa17.98■□□□□ 0.47
SMPDL3B-206ENST00000549094 TMC1Q8TDI8 760 aa17.98■□□□□ 0.47
SMPDL3B-206ENST00000549094 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
SMPDL3B-206ENST00000549094 LMTK3Q96Q04 1460 aa17.97■□□□□ 0.47
SMPDL3B-206ENST00000549094 IQGAP3Q86VI3 1631 aa17.97■□□□□ 0.47
SMPDL3B-206ENST00000549094 FAM135AQ9P2D6 1515 aa17.97■□□□□ 0.47
SMPDL3B-206ENST00000549094 LAMC1P11047 1609 aa17.96■□□□□ 0.47
SMPDL3B-206ENST00000549094 VWDEQ8N2E2 1590 aa17.96■□□□□ 0.47
SMPDL3B-206ENST00000549094 WASHC2CQ9Y4E1 1318 aa17.96■□□□□ 0.47
SMPDL3B-206ENST00000549094 CLTCQ00610 1675 aaKnown RBP17.95■□□□□ 0.46
SMPDL3B-206ENST00000549094 DEKP35659 375 aaKnown RBP17.95■□□□□ 0.46
SMPDL3B-206ENST00000549094 IPO9Q96P70 1041 aaKnown RBP17.95■□□□□ 0.46
SMPDL3B-206ENST00000549094 ESF1Q9H501 851 aaKnown RBP17.95■□□□□ 0.46
SMPDL3B-206ENST00000549094 POLR3GLQ9BT43 218 aa17.94■□□□□ 0.46
SMPDL3B-206ENST00000549094 INSRP06213 1382 aa17.94■□□□□ 0.46
SMPDL3B-206ENST00000549094 ZNF326Q5BKZ1 582 aaKnown RBP17.94■□□□□ 0.46
SMPDL3B-206ENST00000549094 ZC3H13Q5T200 1668 aaKnown RBP17.93■□□□□ 0.46
SMPDL3B-206ENST00000549094 CARD11Q9BXL7 1154 aa17.93■□□□□ 0.46
SMPDL3B-206ENST00000549094 TRPM1Q7Z4N2 1603 aa17.93■□□□□ 0.46
SMPDL3B-206ENST00000549094 CEP152O94986 1710 aa17.93■□□□□ 0.46
SMPDL3B-206ENST00000549094 ABCC3O15438 1527 aa17.92■□□□□ 0.46
SMPDL3B-206ENST00000549094 LMTK2Q8IWU2 1503 aa17.92■□□□□ 0.46
SMPDL3B-206ENST00000549094 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
SMPDL3B-206ENST00000549094 TET3O43151 1660 aa17.91■□□□□ 0.46
SMPDL3B-206ENST00000549094 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
SMPDL3B-206ENST00000549094 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
SMPDL3B-206ENST00000549094 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
SMPDL3B-206ENST00000549094 NPATQ14207 1427 aa17.89■□□□□ 0.45
SMPDL3B-206ENST00000549094 TCERG1O14776 1098 aaKnown RBP17.88■□□□□ 0.45
SMPDL3B-206ENST00000549094 CAMSAP1Q5T5Y3 1602 aa17.87■□□□□ 0.45
SMPDL3B-206ENST00000549094 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
SMPDL3B-206ENST00000549094 CEBPAP49715 358 aaPredicted RBP17.87■□□□□ 0.45
SMPDL3B-206ENST00000549094 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
SMPDL3B-206ENST00000549094 ZMYM3Q14202 1370 aa17.86■□□□□ 0.45
SMPDL3B-206ENST00000549094 PARD3Q8TEW0 1356 aa17.86■□□□□ 0.45
SMPDL3B-206ENST00000549094 NLRP13Q86W25 1043 aa17.86■□□□□ 0.45
SMPDL3B-206ENST00000549094 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
SMPDL3B-206ENST00000549094 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
SMPDL3B-206ENST00000549094 MS4A1P11836 297 aa17.84■□□□□ 0.45
SMPDL3B-206ENST00000549094 PRAG1Q86YV5 1406 aa17.83■□□□□ 0.45
SMPDL3B-206ENST00000549094 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
SMPDL3B-206ENST00000549094 RCAN3Q9UKA8 241 aa17.83■□□□□ 0.44
SMPDL3B-206ENST00000549094 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
SMPDL3B-206ENST00000549094 NBR1Q14596 966 aa17.82■□□□□ 0.44
SMPDL3B-206ENST00000549094 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
SMPDL3B-206ENST00000549094 GPRASP1Q5JY77 1395 aa17.81■□□□□ 0.44
SMPDL3B-206ENST00000549094 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
SMPDL3B-206ENST00000549094 MYO3AQ8NEV4 1616 aa17.81■□□□□ 0.44
SMPDL3B-206ENST00000549094 CCDC144AA2RUR9 1427 aa17.8■□□□□ 0.44
SMPDL3B-206ENST00000549094 CNGB1Q14028 1251 aaPredicted RBP17.8■□□□□ 0.44
SMPDL3B-206ENST00000549094 SPHKAPQ2M3C7 1700 aa17.77■□□□□ 0.44
SMPDL3B-206ENST00000549094 PTPRTO14522 1441 aa17.77■□□□□ 0.43
SMPDL3B-206ENST00000549094 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
SMPDL3B-206ENST00000549094 DCAF11Q8TEB1 546 aa17.76■□□□□ 0.43
SMPDL3B-206ENST00000549094 HSPA2P54652 639 aa17.76■□□□□ 0.43
SMPDL3B-206ENST00000549094 FBXO31Q5XUX0 539 aaPredicted RBP17.76■□□□□ 0.43
SMPDL3B-206ENST00000549094 CEP170BQ9Y4F5 1589 aaPredicted RBP17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 ERVK-7P63135 1459 aa17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 PLA2R1Q13018 1463 aa17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 USP35Q9P2H5 1018 aa17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 NOS1P29475 1434 aa17.75■□□□□ 0.43
SMPDL3B-206ENST00000549094 TRPM2O94759 1503 aa17.74■□□□□ 0.43
SMPDL3B-206ENST00000549094 KDM2AQ9Y2K7 1162 aa17.73■□□□□ 0.43
SMPDL3B-206ENST00000549094 SPATA31D1Q6ZQQ2 1576 aa17.73■□□□□ 0.43
SMPDL3B-206ENST00000549094 DDRGK1Q96HY6 314 aa17.72■□□□□ 0.43
SMPDL3B-206ENST00000549094 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
SMPDL3B-206ENST00000549094 PDE4AP27815 886 aa17.71■□□□□ 0.43
SMPDL3B-206ENST00000549094 SYNMO15061 1565 aa17.7■□□□□ 0.42
SMPDL3B-206ENST00000549094 TNRQ92752 1358 aa17.7■□□□□ 0.42
SMPDL3B-206ENST00000549094 BACH2Q9BYV9 841 aa17.7■□□□□ 0.42
SMPDL3B-206ENST00000549094 A2ML1A8K2U0 1454 aa17.69■□□□□ 0.42
SMPDL3B-206ENST00000549094 SLC52A1Q9NWF4 448 aa17.69■□□□□ 0.42
SMPDL3B-206ENST00000549094 NLRP1Q9C000 1473 aa17.68■□□□□ 0.42
SMPDL3B-206ENST00000549094 CLTCL1P53675 1640 aa17.67■□□□□ 0.42
SMPDL3B-206ENST00000549094 DMRT2Q9Y5R5 561 aa17.67■□□□□ 0.42
SMPDL3B-206ENST00000549094 UGGT1Q9NYU2 1555 aa17.66■□□□□ 0.42
SMPDL3B-206ENST00000549094 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
SMPDL3B-206ENST00000549094 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
SMPDL3B-206ENST00000549094 IDI1Q13907 227 aa17.65■□□□□ 0.42
SMPDL3B-206ENST00000549094 TMF1P82094 1093 aa17.65■□□□□ 0.42
SMPDL3B-206ENST00000549094 NPM2Q86SE8 214 aaKnown RBP17.65■□□□□ 0.42
SMPDL3B-206ENST00000549094 IQGAP1P46940 1657 aa17.64■□□□□ 0.41
SMPDL3B-206ENST00000549094 KIF1BO60333 1816 aa17.63■□□□□ 0.41
SMPDL3B-206ENST00000549094 DISP3Q9P2K9 1392 aa17.63■□□□□ 0.41
SMPDL3B-206ENST00000549094 CHGAP10645 457 aaKnown RBP17.62■□□□□ 0.41
SMPDL3B-206ENST00000549094 STAG3Q9UJ98 1225 aa17.61■□□□□ 0.41
SMPDL3B-206ENST00000549094 TESK2Q96S53 571 aa17.6■□□□□ 0.41
SMPDL3B-206ENST00000549094 SENP3-EIF4A1A0A087X0R7 540 aa17.59■□□□□ 0.41
SMPDL3B-206ENST00000549094 KDM5AP29375 1690 aaKnown RBP17.59■□□□□ 0.41
SMPDL3B-206ENST00000549094 EIF3AQ14152 1382 aaKnown RBP17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 UBR1Q8IWV7 1749 aa17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 NEFMP07197 916 aa17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 RGL3Q3MIN7 710 aa17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 CRBNQ96SW2 442 aa17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 NEURL4Q96JN8 1562 aa17.58■□□□□ 0.41
SMPDL3B-206ENST00000549094 CENPQQ7L2Z9 268 aaPredicted RBP17.58■□□□□ 0.4
SMPDL3B-206ENST00000549094 ADGRB3O60242 1522 aa17.57■□□□□ 0.4
SMPDL3B-206ENST00000549094 TMEM131LA2VDJ0 1609 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms