RNA–Protein interactions for RNA: ENST00000549077.5

EIF4B-204, Transcript of eukaryotic translation initiation factor 4B, humanhuman

TSL 5

Gene EIF4B, Length 885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4B-204ENST00000549077 RTEL1-TNFRSF6BF6WH68 1400 aa13.28□□□□□ -0.28
EIF4B-204ENST00000549077 PIK3C2BO00750 1634 aa13.28□□□□□ -0.28
EIF4B-204ENST00000549077 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
EIF4B-204ENST00000549077 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
EIF4B-204ENST00000549077 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.26□□□□□ -0.29
EIF4B-204ENST00000549077 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
EIF4B-204ENST00000549077 CEP152O94986 1710 aa13.25□□□□□ -0.29
EIF4B-204ENST00000549077 CCDC18Q5T9S5 1454 aa13.24□□□□□ -0.29
EIF4B-204ENST00000549077 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
EIF4B-204ENST00000549077 DDX17Q92841 729 aaKnown RBP13.24□□□□□ -0.29
EIF4B-204ENST00000549077 USP21Q9UK80 565 aa13.24□□□□□ -0.29
EIF4B-204ENST00000549077 CAMSAP2Q08AD1 1489 aa13.23□□□□□ -0.29
EIF4B-204ENST00000549077 BLMP54132 1417 aaPredicted RBP13.23□□□□□ -0.29
EIF4B-204ENST00000549077 PNPLA6Q8IY17 1366 aa13.23□□□□□ -0.29
EIF4B-204ENST00000549077 CHD2O14647 1828 aaKnown RBP13.23□□□□□ -0.29
EIF4B-204ENST00000549077 ATRNO75882 1429 aa13.22□□□□□ -0.29
EIF4B-204ENST00000549077 CCNB3Q8WWL7 1395 aa13.22□□□□□ -0.29
EIF4B-204ENST00000549077 MROH1Q8NDA8 1641 aa13.22□□□□□ -0.29
EIF4B-204ENST00000549077 C14orf37Q86TY3 774 aa13.22□□□□□ -0.29
EIF4B-204ENST00000549077 ASXL1Q8IXJ9 1541 aa13.22□□□□□ -0.29
EIF4B-204ENST00000549077 TRPC5Q9UL62 973 aaPredicted RBP13.21□□□□□ -0.29
EIF4B-204ENST00000549077 CASKIN1Q8WXD9 1431 aa13.21□□□□□ -0.3
EIF4B-204ENST00000549077 CEP350Q5VT06 3117 aa13.2□□□□□ -0.3
EIF4B-204ENST00000549077 EFCAB6Q5THR3 1501 aa13.18□□□□□ -0.3
EIF4B-204ENST00000549077 ATF3P18847 181 aa13.18□□□□□ -0.3
EIF4B-204ENST00000549077 CADPS2Q86UW7 1296 aa13.18□□□□□ -0.3
EIF4B-204ENST00000549077 BCANQ96GW7 911 aa13.18□□□□□ -0.3
EIF4B-204ENST00000549077 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
EIF4B-204ENST00000549077 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
EIF4B-204ENST00000549077 C19orf44Q9H6X5 657 aa13.16□□□□□ -0.3
EIF4B-204ENST00000549077 CCDC141Q6ZP82 1450 aa13.16□□□□□ -0.3
EIF4B-204ENST00000549077 FNBP4Q8N3X1 1017 aaPredicted RBP13.15□□□□□ -0.3
EIF4B-204ENST00000549077 UTRNP46939 3433 aa13.14□□□□□ -0.31
EIF4B-204ENST00000549077 BRWD3Q6RI45 1802 aa13.14□□□□□ -0.31
EIF4B-204ENST00000549077 UBTFP17480 764 aaKnown RBP13.14□□□□□ -0.31
EIF4B-204ENST00000549077 IDI1Q13907 227 aa13.14□□□□□ -0.31
EIF4B-204ENST00000549077 NCOA3Q9Y6Q9 1424 aa13.13□□□□□ -0.31
EIF4B-204ENST00000549077 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
EIF4B-204ENST00000549077 ZNF784Q8NCA9 323 aaPredicted RBP13.11□□□□□ -0.31
EIF4B-204ENST00000549077 MST1RQ04912 1400 aa13.11□□□□□ -0.31
EIF4B-204ENST00000549077 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
EIF4B-204ENST00000549077 EEA1Q15075 1411 aa13.1□□□□□ -0.31
EIF4B-204ENST00000549077 UNC13BO14795 1591 aa13.09□□□□□ -0.31
EIF4B-204ENST00000549077 GLI3P10071 1580 aa13.09□□□□□ -0.31
EIF4B-204ENST00000549077 ARHGAP31Q2M1Z3 1444 aa13.09□□□□□ -0.31
EIF4B-204ENST00000549077 GJD4Q96KN9 370 aaPredicted RBP13.09□□□□□ -0.31
EIF4B-204ENST00000549077 C1QTNF8P60827 252 aa13.08□□□□□ -0.32
EIF4B-204ENST00000549077 CAMTA1Q9Y6Y1 1673 aa13.08□□□□□ -0.32
EIF4B-204ENST00000549077 ADGRB3O60242 1522 aa13.08□□□□□ -0.32
EIF4B-204ENST00000549077 FYCO1Q9BQS8 1478 aa13.07□□□□□ -0.32
EIF4B-204ENST00000549077 PLEKHG1Q9ULL1 1385 aa13.07□□□□□ -0.32
EIF4B-204ENST00000549077 EIF2AK4Q9P2K8 1649 aaKnown RBP13.06□□□□□ -0.32
EIF4B-204ENST00000549077 ZFYVE9O95405 1425 aa13.05□□□□□ -0.32
EIF4B-204ENST00000549077 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
EIF4B-204ENST00000549077 RALGAPBQ86X10 1494 aa13.05□□□□□ -0.32
EIF4B-204ENST00000549077 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
EIF4B-204ENST00000549077 MYO5BQ9ULV0 1848 aa13.04□□□□□ -0.32
EIF4B-204ENST00000549077 ADAMTS13Q76LX8 1427 aa13.04□□□□□ -0.32
EIF4B-204ENST00000549077 PTPRUQ92729 1446 aa13.04□□□□□ -0.32
EIF4B-204ENST00000549077 TBX22Q9Y458 520 aa13.03□□□□□ -0.32
EIF4B-204ENST00000549077 SPHKAPQ2M3C7 1700 aa13.02□□□□□ -0.32
EIF4B-204ENST00000549077 MTUS2Q5JR59 1369 aa13.02□□□□□ -0.33
EIF4B-204ENST00000549077 DCCP43146 1447 aa13.02□□□□□ -0.33
EIF4B-204ENST00000549077 BAG6P46379 1132 aa13.01□□□□□ -0.33
EIF4B-204ENST00000549077 SEPT12Q8IYM1 358 aa13.01□□□□□ -0.33
EIF4B-204ENST00000549077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.01□□□□□ -0.339e-8■■■□□ 18
EIF4B-204ENST00000549077 ARHGEF5Q12774 1597 aa13□□□□□ -0.33
EIF4B-204ENST00000549077 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
EIF4B-204ENST00000549077 PPP1R15AO75807 674 aaPredicted RBP13□□□□□ -0.33
EIF4B-204ENST00000549077 TRPM2O94759 1503 aa12.99□□□□□ -0.33
EIF4B-204ENST00000549077 MYOM2P54296 1465 aa12.99□□□□□ -0.33
EIF4B-204ENST00000549077 TSPY4P0CV99 314 aa12.99□□□□□ -0.33
EIF4B-204ENST00000549077 TSPY10P0CW01 314 aa12.99□□□□□ -0.33
EIF4B-204ENST00000549077 AMOTL2Q9Y2J4 779 aa12.99□□□□□ -0.33
EIF4B-204ENST00000549077 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
EIF4B-204ENST00000549077 COL22A1Q8NFW1 1626 aaPredicted RBP12.99□□□□□ -0.33
EIF4B-204ENST00000549077 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
EIF4B-204ENST00000549077 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
EIF4B-204ENST00000549077 RSPH4AQ5TD94 716 aa12.97□□□□□ -0.33
EIF4B-204ENST00000549077 POTEDQ86YR6 584 aa12.97□□□□□ -0.33
EIF4B-204ENST00000549077 LAMC1P11047 1609 aa12.97□□□□□ -0.33
EIF4B-204ENST00000549077 NOS1P29475 1434 aa12.96□□□□□ -0.33
EIF4B-204ENST00000549077 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
EIF4B-204ENST00000549077 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
EIF4B-204ENST00000549077 KRT27Q7Z3Y8 459 aa12.95□□□□□ -0.34
EIF4B-204ENST00000549077 UNC5CLQ8IV45 518 aa12.95□□□□□ -0.34
EIF4B-204ENST00000549077 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
EIF4B-204ENST00000549077 GCC2Q8IWJ2 1684 aa12.95□□□□□ -0.34
EIF4B-204ENST00000549077 FAM182BQ5T319 152 aa12.94□□□□□ -0.34
EIF4B-204ENST00000549077 CEP162Q5TB80 1403 aa12.94□□□□□ -0.34
EIF4B-204ENST00000549077 NALCNQ8IZF0 1738 aa12.93□□□□□ -0.34
EIF4B-204ENST00000549077 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
EIF4B-204ENST00000549077 C1orf167Q5SNV9 1468 aa12.93□□□□□ -0.34
EIF4B-204ENST00000549077 PIK3R4Q99570 1358 aa12.93□□□□□ -0.34
EIF4B-204ENST00000549077 SLIT2O94813 1529 aa12.93□□□□□ -0.34
EIF4B-204ENST00000549077 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
EIF4B-204ENST00000549077 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
EIF4B-204ENST00000549077 DUOX2Q9NRD8 1548 aa12.92□□□□□ -0.34
EIF4B-204ENST00000549077 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
EIF4B-204ENST00000549077 TMEM131LA2VDJ0 1609 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms