RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 PPP1R18Q6NYC8 613 aa11.32□□□□□ -0.6
CNOT2-216ENST00000548939 OATP04181 439 aa11.31□□□□□ -0.6
CNOT2-216ENST00000548939 NKX2-3Q8TAU0 364 aa11.31□□□□□ -0.6
CNOT2-216ENST00000548939 PCDHB3Q9Y5E6 796 aa11.31□□□□□ -0.6
CNOT2-216ENST00000548939 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.3□□□□□ -0.6
CNOT2-216ENST00000548939 PXYLP1Q8TE99 480 aa11.29□□□□□ -0.6
CNOT2-216ENST00000548939 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.29□□□□□ -0.6
CNOT2-216ENST00000548939 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
CNOT2-216ENST00000548939 ZPR1O75312 459 aa11.28□□□□□ -0.6
CNOT2-216ENST00000548939 KMT5BQ4FZB7 885 aa11.28□□□□□ -0.6
CNOT2-216ENST00000548939 PRKD2Q9BZL6 878 aa11.27□□□□□ -0.61
CNOT2-216ENST00000548939 GNPATO15228 680 aa11.26□□□□□ -0.61
CNOT2-216ENST00000548939 CFHP08603 1231 aa11.26□□□□□ -0.61
CNOT2-216ENST00000548939 GGCXP38435 758 aa11.26□□□□□ -0.61
CNOT2-216ENST00000548939 BLOC1S3Q6QNY0 202 aa11.26□□□□□ -0.61
CNOT2-216ENST00000548939 METTL3Q86U44 580 aaKnown RBP11.25□□□□□ -0.61
CNOT2-216ENST00000548939 ACTN4O43707 911 aaKnown RBP11.24□□□□□ -0.61
CNOT2-216ENST00000548939 FECHP22830 423 aa11.24□□□□□ -0.61
CNOT2-216ENST00000548939 GPR37O15354 613 aa11.23□□□□□ -0.61
CNOT2-216ENST00000548939 SLC10A3P09131 477 aa11.23□□□□□ -0.61
CNOT2-216ENST00000548939 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
CNOT2-216ENST00000548939 Q6ZNB5 142 aa11.21□□□□□ -0.61
CNOT2-216ENST00000548939 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
CNOT2-216ENST00000548939 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
CNOT2-216ENST00000548939 TMUB1Q9BVT8 246 aa11.2□□□□□ -0.62
CNOT2-216ENST00000548939 LAPTM4AQ15012 233 aa11.19□□□□□ -0.62
CNOT2-216ENST00000548939 VSIG10Q8N0Z9 540 aa11.19□□□□□ -0.62
CNOT2-216ENST00000548939 TLL1O43897 1013 aa11.18□□□□□ -0.62
CNOT2-216ENST00000548939 GFRA3O60609 400 aa11.18□□□□□ -0.62
CNOT2-216ENST00000548939 NR1I2O75469 434 aa11.16□□□□□ -0.62
CNOT2-216ENST00000548939 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
CNOT2-216ENST00000548939 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
CNOT2-216ENST00000548939 RDH13Q8NBN7 331 aa11.14□□□□□ -0.63
CNOT2-216ENST00000548939 NLRP7Q8WX94 980 aa11.14□□□□□ -0.63
CNOT2-216ENST00000548939 TULP1O00294 542 aaPredicted RBP11.13□□□□□ -0.63
CNOT2-216ENST00000548939 DDX11L8A8MPP1 907 aa11.12□□□□□ -0.63
CNOT2-216ENST00000548939 S1PR4O95977 384 aa11.12□□□□□ -0.63
CNOT2-216ENST00000548939 NRG2O14511 850 aaPredicted RBP11.11□□□□□ -0.63
CNOT2-216ENST00000548939 ADH1BP00325 375 aa11.11□□□□□ -0.63
CNOT2-216ENST00000548939 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
CNOT2-216ENST00000548939 PHOX2BQ99453 314 aa11.11□□□□□ -0.63
CNOT2-216ENST00000548939 SCUBE3Q8IX30 993 aa11.1□□□□□ -0.63
CNOT2-216ENST00000548939 SULF1Q8IWU6 871 aa11.09□□□□□ -0.63
CNOT2-216ENST00000548939 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
CNOT2-216ENST00000548939 PPEF1O14829 653 aaPredicted RBP11.08□□□□□ -0.64
CNOT2-216ENST00000548939 SLC19A1P41440 591 aa11.08□□□□□ -0.64
CNOT2-216ENST00000548939 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
CNOT2-216ENST00000548939 SLC6A16Q9GZN6 736 aa11.07□□□□□ -0.64
CNOT2-216ENST00000548939 GCGRP47871 477 aa11.05□□□□□ -0.64
CNOT2-216ENST00000548939 FUT2Q10981 343 aa11.05□□□□□ -0.64
CNOT2-216ENST00000548939 MAP2K5Q13163 448 aa11.05□□□□□ -0.64
CNOT2-216ENST00000548939 TRAF7Q6Q0C0 670 aa11.05□□□□□ -0.64
CNOT2-216ENST00000548939 SPSB2Q99619 263 aa11.05□□□□□ -0.64
CNOT2-216ENST00000548939 ATP6V1AP38606 617 aa11.04□□□□□ -0.64
CNOT2-216ENST00000548939 MORN1Q5T089 497 aa11.04□□□□□ -0.64
CNOT2-216ENST00000548939 EMID1Q96A84 441 aaPredicted RBP11.04□□□□□ -0.64
CNOT2-216ENST00000548939 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
CNOT2-216ENST00000548939 LCE2BO14633 110 aa11.01□□□□□ -0.65
CNOT2-216ENST00000548939 LIAT1Q6ZQX7 453 aa11.01□□□□□ -0.65
CNOT2-216ENST00000548939 IRF6O14896 467 aa11□□□□□ -0.65
CNOT2-216ENST00000548939 ZNF598Q86UK7 904 aaKnown RBP11□□□□□ -0.65
CNOT2-216ENST00000548939 SLC27A5Q9Y2P5 690 aa11□□□□□ -0.65
CNOT2-216ENST00000548939 FMNL1O95466 1100 aaPredicted RBP10.98□□□□□ -0.65
CNOT2-216ENST00000548939 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
CNOT2-216ENST00000548939 THAP11Q96EK4 314 aa10.98□□□□□ -0.65
CNOT2-216ENST00000548939 MINK1Q8N4C8 1332 aaPredicted RBP10.98□□□□□ -0.65
CNOT2-216ENST00000548939 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
CNOT2-216ENST00000548939 PLA2G2CQ5R387 149 aa10.97□□□□□ -0.65
CNOT2-216ENST00000548939 ZNF697Q5TEC3 545 aa10.97□□□□□ -0.65
CNOT2-216ENST00000548939 CD46P15529 392 aa10.95□□□□□ -0.66
CNOT2-216ENST00000548939 MDM2Q00987 491 aaPredicted RBP10.95□□□□□ -0.66
CNOT2-216ENST00000548939 SALL2Q9Y467 1007 aaPredicted RBP10.95□□□□□ -0.66
CNOT2-216ENST00000548939 CCDC102AQ96A19 550 aa10.94□□□□□ -0.66
CNOT2-216ENST00000548939 PRR20EP86478 221 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 PRR20CP86479 221 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 PRR20DP86480 221 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 PRR20BP86481 221 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 PRR20AP86496 221 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
CNOT2-216ENST00000548939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
CNOT2-216ENST00000548939 FAM160A2Q8N612 972 aaPredicted RBP10.93□□□□□ -0.66
CNOT2-216ENST00000548939 FCF1Q9Y324 198 aaKnown RBP10.92□□□□□ -0.66
CNOT2-216ENST00000548939 RNF19BQ6ZMZ0 732 aa10.91□□□□□ -0.66
CNOT2-216ENST00000548939 KDM4AO75164 1064 aa10.9□□□□□ -0.66
CNOT2-216ENST00000548939 Q3C1V9 767 aa10.9□□□□□ -0.66
CNOT2-216ENST00000548939 PKDCCQ504Y2 493 aa10.9□□□□□ -0.66
CNOT2-216ENST00000548939 PRDM9Q9NQV7 894 aa10.9□□□□□ -0.66
CNOT2-216ENST00000548939 TNFRSF10AO00220 468 aa10.89□□□□□ -0.67
CNOT2-216ENST00000548939 GDF9O60383 454 aa10.89□□□□□ -0.67
CNOT2-216ENST00000548939 CLCN1P35523 988 aa10.88□□□□□ -0.67
CNOT2-216ENST00000548939 RPIAP49247 311 aa10.88□□□□□ -0.67
CNOT2-216ENST00000548939 MSS51Q4VC12 460 aa10.88□□□□□ -0.67
CNOT2-216ENST00000548939 GPCPD1Q9NPB8 672 aa10.88□□□□□ -0.67
CNOT2-216ENST00000548939 DGAT1O75907 488 aa10.87□□□□□ -0.67
CNOT2-216ENST00000548939 LMOD2Q6P5Q4 547 aa10.87□□□□□ -0.67
CNOT2-216ENST00000548939 KRI1Q8N9T8 703 aaKnown RBP10.87□□□□□ -0.67
CNOT2-216ENST00000548939 USP46P62068 366 aa10.86□□□□□ -0.67
CNOT2-216ENST00000548939 FOXC1Q12948 553 aa10.86□□□□□ -0.67
CNOT2-216ENST00000548939 FAM187AA6NFU0 413 aa10.85□□□□□ -0.67
CNOT2-216ENST00000548939 CD2BP2O95400 341 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms