RNA–Protein interactions for RNA: ENST00000548882.5

MMP19-207, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-207ENST00000548882 RAPGEF6Q8TEU7 1601 aa11.66□□□□□ -0.54
MMP19-207ENST00000548882 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
MMP19-207ENST00000548882 ABCA5Q8WWZ7 1642 aa11.66□□□□□ -0.54
MMP19-207ENST00000548882 ZKSCAN2Q63HK3 967 aa11.66□□□□□ -0.54
MMP19-207ENST00000548882 HDGFL2Q7Z4V5 671 aaPredicted RBP11.65□□□□□ -0.54
MMP19-207ENST00000548882 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
MMP19-207ENST00000548882 PER1O15534 1290 aaPredicted RBP11.65□□□□□ -0.54
MMP19-207ENST00000548882 PARD3Q8TEW0 1356 aa11.65□□□□□ -0.54
MMP19-207ENST00000548882 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
MMP19-207ENST00000548882 GZF1Q9H116 711 aaPredicted RBP11.65□□□□□ -0.54
MMP19-207ENST00000548882 TCP11L2Q8N4U5 519 aa11.64□□□□□ -0.55
MMP19-207ENST00000548882 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
MMP19-207ENST00000548882 LRPPRCP42704 1394 aaKnown RBP11.64□□□□□ -0.55
MMP19-207ENST00000548882 DISP3Q9P2K9 1392 aa11.64□□□□□ -0.55
MMP19-207ENST00000548882 AAMPQ13685 434 aa11.64□□□□□ -0.55
MMP19-207ENST00000548882 TERF2IPQ9NYB0 399 aa11.64□□□□□ -0.55
MMP19-207ENST00000548882 UHRF1BP1Q6BDS2 1440 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 EVC2Q86UK5 1308 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 KDM6BO15054 1643 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 KIF14Q15058 1648 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 MTHFSP49914 203 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 GCC2Q8IWJ2 1684 aa11.63□□□□□ -0.55
MMP19-207ENST00000548882 ADAMTS12P58397 1594 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 ATP10BO94823 1461 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 VGFO15240 615 aaPredicted RBP11.62□□□□□ -0.55
MMP19-207ENST00000548882 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 TESK2Q96S53 571 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.62□□□□□ -0.55
MMP19-207ENST00000548882 FRAT2O75474 233 aaPredicted RBP11.62□□□□□ -0.55
MMP19-207ENST00000548882 DZIP1LQ8IYY4 767 aaKnown RBP11.62□□□□□ -0.55
MMP19-207ENST00000548882 IL27Q8NEV9 243 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 NCLP19338 710 aaKnown RBP11.62□□□□□ -0.55
MMP19-207ENST00000548882 DISP1Q96F81 1524 aa11.62□□□□□ -0.55
MMP19-207ENST00000548882 KIAA0556O60303 1618 aa11.61□□□□□ -0.55
MMP19-207ENST00000548882 PRAG1Q86YV5 1406 aa11.61□□□□□ -0.55
MMP19-207ENST00000548882 GOLGA6L3A6NEY3 463 aa11.61□□□□□ -0.55
MMP19-207ENST00000548882 CASC1Q6TDU7 716 aa11.61□□□□□ -0.55
MMP19-207ENST00000548882 SLC12A5Q9H2X9 1139 aa11.61□□□□□ -0.55
MMP19-207ENST00000548882 TMEM132EQ6IEE7 984 aa11.6□□□□□ -0.55
MMP19-207ENST00000548882 CALD1Q05682 793 aaKnown RBP11.6□□□□□ -0.55
MMP19-207ENST00000548882 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
MMP19-207ENST00000548882 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
MMP19-207ENST00000548882 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
MMP19-207ENST00000548882 ADGRL2O95490 1459 aa11.59□□□□□ -0.55
MMP19-207ENST00000548882 DDX19BQ9UMR2 479 aa11.59□□□□□ -0.55
MMP19-207ENST00000548882 GBP4Q96PP9 640 aa11.59□□□□□ -0.55
MMP19-207ENST00000548882 WWC1Q8IX03 1113 aa11.58□□□□□ -0.56
MMP19-207ENST00000548882 ITSN2Q9NZM3 1697 aa11.58□□□□□ -0.56
MMP19-207ENST00000548882 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
MMP19-207ENST00000548882 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
MMP19-207ENST00000548882 SCAPERQ9BY12 1400 aa11.57□□□□□ -0.56
MMP19-207ENST00000548882 PDZRN3Q9UPQ7 1066 aa11.57□□□□□ -0.56
MMP19-207ENST00000548882 DENND4BO75064 1496 aaPredicted RBP11.57□□□□□ -0.56
MMP19-207ENST00000548882 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
MMP19-207ENST00000548882 WDR63Q8IWG1 891 aa11.56□□□□□ -0.56
MMP19-207ENST00000548882 CFAP44Q96MT7 982 aa11.56□□□□□ -0.56
MMP19-207ENST00000548882 RIPK4P57078 832 aa11.56□□□□□ -0.56
MMP19-207ENST00000548882 SHANK2Q9UPX8 1470 aa11.55□□□□□ -0.56
MMP19-207ENST00000548882 NINLQ9Y2I6 1382 aa11.55□□□□□ -0.56
MMP19-207ENST00000548882 C22orf23Q9BZE7 217 aa11.55□□□□□ -0.56
MMP19-207ENST00000548882 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
MMP19-207ENST00000548882 FAM135AQ9P2D6 1515 aa11.55□□□□□ -0.56
MMP19-207ENST00000548882 DIAPH1O60610 1272 aaKnown RBP11.54□□□□□ -0.56
MMP19-207ENST00000548882 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
MMP19-207ENST00000548882 KDM5BQ9UGL1 1544 aa11.54□□□□□ -0.56
MMP19-207ENST00000548882 ANKRD45Q5TZF3 282 aa11.54□□□□□ -0.56
MMP19-207ENST00000548882 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
MMP19-207ENST00000548882 CABP2Q9NPB3 220 aa11.54□□□□□ -0.56
MMP19-207ENST00000548882 NKTRP30414 1462 aaKnown RBP11.54□□□□□ -0.56
MMP19-207ENST00000548882 MINK1Q8N4C8 1332 aaPredicted RBP11.54□□□□□ -0.56
MMP19-207ENST00000548882 ELL2O00472 640 aaPredicted RBP11.54□□□□□ -0.56
MMP19-207ENST00000548882 PTMSP20962 102 aa11.53□□□□□ -0.56
MMP19-207ENST00000548882 SCAF11Q99590 1463 aaKnown RBP11.53□□□□□ -0.56
MMP19-207ENST00000548882 TARBP1Q13395 1621 aaKnown RBP11.52□□□□□ -0.56
MMP19-207ENST00000548882 DDX11L8A8MPP1 907 aa11.52□□□□□ -0.56
MMP19-207ENST00000548882 EXOSC9Q06265 439 aaKnown RBP11.52□□□□□ -0.56
MMP19-207ENST00000548882 AEBP2Q6ZN18 517 aaPredicted RBP11.52□□□□□ -0.56
MMP19-207ENST00000548882 APBB1O00213 710 aa11.52□□□□□ -0.57
MMP19-207ENST00000548882 RARSP54136 660 aaKnown RBP11.52□□□□□ -0.57
MMP19-207ENST00000548882 NUP160Q12769 1436 aa11.52□□□□□ -0.57
MMP19-207ENST00000548882 KIF16BQ96L93 1317 aa11.52□□□□□ -0.57
MMP19-207ENST00000548882 PLEKHH1Q9ULM0 1364 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 IGHDP01880 384 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 PLPPR3Q6T4P5 718 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 TSR2Q969E8 191 aaKnown RBP11.51□□□□□ -0.57
MMP19-207ENST00000548882 ADGRF5Q8IZF2 1346 aa11.51□□□□□ -0.57
MMP19-207ENST00000548882 LMOD3Q0VAK6 560 aa11.5□□□□□ -0.57
MMP19-207ENST00000548882 MVPQ14764 893 aaKnown RBP11.5□□□□□ -0.57
MMP19-207ENST00000548882 RSPH6AQ9H0K4 717 aa11.5□□□□□ -0.57
MMP19-207ENST00000548882 PBRM1Q86U86 1689 aa11.5□□□□□ -0.57
MMP19-207ENST00000548882 COL17A1Q9UMD9 1497 aaPredicted RBP11.49□□□□□ -0.57
MMP19-207ENST00000548882 CT47B1P0C2W7 299 aaPredicted RBP11.49□□□□□ -0.57
MMP19-207ENST00000548882 MLECQ14165 292 aa11.49□□□□□ -0.57
MMP19-207ENST00000548882 C8orf34Q49A92 452 aa11.49□□□□□ -0.57
MMP19-207ENST00000548882 GPRASP1Q5JY77 1395 aa11.49□□□□□ -0.57
MMP19-207ENST00000548882 NSD3Q9BZ95 1437 aa11.49□□□□□ -0.57
MMP19-207ENST00000548882 SOX12O15370 315 aa11.49□□□□□ -0.57
MMP19-207ENST00000548882 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms